Wall clock time and date at job start Sun Mar 7 2021 04:59:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21287 * 120.00163 * 2 1 4 4 C 1.50699 * 119.99999 * 180.02562 * 2 1 3 5 5 N 1.46498 * 112.84928 * 323.38739 * 4 2 1 6 6 C 1.34777 * 120.00353 * 294.95390 * 5 4 2 7 7 O 1.21281 * 119.99657 * 4.47051 * 6 5 4 8 8 C 1.50702 * 120.00162 * 184.47362 * 6 5 4 9 9 C 1.50701 * 109.46949 * 179.97438 * 8 6 5 10 10 C 1.38272 * 119.93674 * 90.00015 * 9 8 6 11 11 C 1.38121 * 120.06809 * 179.97438 * 10 9 8 12 12 C 1.38824 * 119.93206 * 0.02791 * 11 10 9 13 13 N 1.40206 * 120.06786 * 179.97438 * 12 11 10 14 14 C 1.36565 * 125.66630 * 235.95650 * 13 12 11 15 15 C 1.34848 * 108.19861 * 179.97438 * 14 13 12 16 16 C 1.40938 * 107.47018 * 359.75110 * 15 14 13 17 17 C 1.34851 * 107.46692 * 0.41014 * 16 15 14 18 18 C 1.50700 * 125.90473 * 179.85270 * 17 16 15 19 19 O 1.42897 * 109.47411 * 217.10572 * 18 17 16 20 20 Si 1.86305 * 109.46760 * 337.10429 * 18 17 16 21 21 C 1.38828 * 119.87028 * 0.24625 * 12 11 10 22 22 C 1.38129 * 119.93070 * 359.47408 * 21 12 11 23 23 C 1.53788 * 113.61211 * 192.19695 * 4 2 1 24 24 C 1.54050 * 86.98041 * 219.97527 * 23 4 2 25 25 H 1.09006 * 113.69283 * 139.99391 * 24 23 4 26 26 O 1.42900 * 113.61849 * 270.88109 * 24 23 4 27 27 C 1.53775 * 113.61855 * 94.58832 * 4 2 1 28 28 H 0.96994 * 120.00091 * 185.21503 * 1 2 3 29 29 H 0.97006 * 119.99982 * 5.21369 * 1 2 3 30 30 H 0.97006 * 120.00150 * 114.94451 * 5 4 2 31 31 H 1.08998 * 109.47045 * 59.99584 * 8 6 5 32 32 H 1.08997 * 109.46940 * 299.99582 * 8 6 5 33 33 H 1.07999 * 119.96823 * 0.02562 * 10 9 8 34 34 H 1.07996 * 120.03192 * 179.97438 * 11 10 9 35 35 H 1.08005 * 125.90122 * 359.95769 * 14 13 12 36 36 H 1.08001 * 126.26470 * 179.97438 * 15 14 13 37 37 H 1.07999 * 126.27101 * 180.26792 * 16 15 14 38 38 H 1.09000 * 109.47115 * 97.10181 * 18 17 16 39 39 H 0.96700 * 113.99475 * 179.97438 * 19 18 17 40 40 H 1.48498 * 110.00156 * 299.99882 * 20 18 17 41 41 H 1.48503 * 109.99873 * 61.31948 * 20 18 17 42 42 H 1.07997 * 120.03413 * 179.75162 * 21 12 11 43 43 H 1.08000 * 119.96465 * 180.27829 * 22 21 12 44 44 H 1.08997 * 113.61760 * 334.47788 * 23 4 2 45 45 H 1.09002 * 113.61182 * 105.38426 * 23 4 2 46 46 H 0.96697 * 114.00292 * 277.49909 * 26 24 23 47 47 H 1.09002 * 113.61456 * 254.61305 * 27 4 2 48 48 H 1.09006 * 113.61403 * 25.43044 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4472 -2.3399 0.8041 6 6 1.3331 -2.1846 2.1380 7 8 1.6983 -1.1536 2.6619 8 6 0.7517 -3.2921 2.9786 9 6 0.7361 -2.8696 4.4251 10 6 -0.3663 -2.2129 4.9402 11 6 -0.3838 -1.8249 6.2657 12 6 0.7072 -2.0943 7.0808 13 7 0.6928 -1.7012 8.4265 14 6 1.6250 -0.9103 9.0351 15 6 1.2683 -0.7563 10.3264 16 6 0.0704 -1.4723 10.5227 17 6 -0.2562 -2.0451 9.3464 18 6 -1.4633 -2.9100 9.0896 19 8 -1.1134 -3.9601 8.1858 20 14 -2.0538 -3.6449 10.6966 21 6 1.8150 -2.7487 6.5593 22 6 1.8242 -3.1394 5.2344 23 6 3.6020 -1.1500 0.2972 24 6 3.8440 -2.2196 -0.7848 25 1 4.7072 -2.0145 -1.4181 26 8 3.8307 -3.5568 -0.2811 27 6 2.5069 -1.7817 -1.4052 28 1 -0.4850 -0.8365 0.0763 29 1 -0.4850 0.8366 -0.0763 30 1 1.0961 -3.1369 0.3769 31 1 1.3609 -4.1894 2.8691 32 1 -0.2662 -3.5017 2.6499 33 1 -1.2150 -2.0039 4.3058 34 1 -1.2449 -1.3117 6.6673 35 1 2.4974 -0.4823 8.5637 36 1 1.8011 -0.1855 11.0726 37 1 -0.4834 -1.5501 11.4467 38 1 -2.2578 -2.3047 8.6532 39 1 -1.8440 -4.5576 7.9753 40 1 -0.9796 -4.4725 11.3017 41 1 -2.4510 -2.5636 11.6339 42 1 2.6668 -2.9560 7.1900 43 1 2.6839 -3.6525 4.8294 44 1 3.9995 -0.1688 0.0379 45 1 3.8834 -1.4703 1.3004 46 1 4.6690 -3.8380 0.1104 47 1 1.9048 -2.6114 -1.7756 48 1 2.6041 -0.9729 -2.1296 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13287746.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:09 Heat of formation + Delta-G solvation = -36.502511 kcal Electronic energy + Delta-G solvation = -34190.171512 eV Core-core repulsion = 29599.737827 eV Total energy + Delta-G solvation = -4590.433685 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.156 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.80319 -42.23997 -40.55640 -39.51658 -39.07404 -37.65636 -36.09262 -34.92790 -34.76321 -33.80317 -32.19003 -31.78251 -31.27784 -28.18421 -27.04513 -26.56379 -26.05290 -23.99579 -23.59471 -22.41040 -21.69701 -21.59566 -20.59758 -20.37790 -19.11750 -18.85331 -18.32424 -18.23896 -18.04027 -17.86548 -17.05625 -16.96076 -16.44425 -16.09090 -15.90037 -15.84553 -15.71643 -15.51918 -15.43682 -15.21604 -14.70485 -14.64728 -14.60190 -14.50649 -14.27787 -13.78465 -13.54568 -13.52892 -13.34775 -13.29014 -13.23588 -12.91330 -12.77736 -12.67665 -12.45684 -12.12504 -12.03475 -11.68997 -11.46671 -11.10549 -10.85177 -10.75960 -10.55742 -10.35621 -10.06076 -10.01086 -9.32453 -9.21084 -5.00182 -0.02010 0.33256 0.94021 1.30321 1.39637 1.57269 1.65734 1.75644 1.87852 1.99743 2.07045 2.49356 2.67588 3.01043 3.28954 3.29674 3.47223 3.61575 3.69083 3.71343 3.74030 3.85493 3.86181 4.04225 4.05470 4.16640 4.29574 4.31791 4.35990 4.37947 4.42497 4.59610 4.59871 4.60470 4.69804 4.78745 4.82642 4.88538 4.90097 4.93992 5.01223 5.04186 5.18012 5.28752 5.36922 5.47950 5.73677 5.77187 5.77914 6.01034 6.31049 6.37914 6.51471 6.81468 6.84981 7.19493 7.25052 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.834 5.834 2 C 0.523 3.477 3 O -0.588 6.588 4 C 0.133 3.867 5 N -0.684 5.684 6 C 0.515 3.485 7 O -0.568 6.568 8 C -0.092 4.092 9 C -0.064 4.064 10 C -0.090 4.090 11 C -0.107 4.107 12 C 0.119 3.881 13 N -0.394 5.394 14 C -0.021 4.021 15 C -0.200 4.200 16 C -0.227 4.227 17 C 0.022 3.978 18 C -0.056 4.056 19 O -0.557 6.557 20 Si 0.818 3.182 21 C -0.129 4.129 22 C -0.095 4.095 23 C -0.163 4.163 24 C 0.096 3.904 25 H 0.092 0.908 26 O -0.552 6.552 27 C -0.108 4.108 28 H 0.414 0.586 29 H 0.405 0.595 30 H 0.426 0.574 31 H 0.133 0.867 32 H 0.142 0.858 33 H 0.150 0.850 34 H 0.123 0.877 35 H 0.177 0.823 36 H 0.157 0.843 37 H 0.141 0.859 38 H 0.091 0.909 39 H 0.404 0.596 40 H -0.308 1.308 41 H -0.288 1.288 42 H 0.120 0.880 43 H 0.142 0.858 44 H 0.089 0.911 45 H 0.065 0.935 46 H 0.398 0.602 47 H 0.117 0.883 48 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.008 -9.446 -7.258 13.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.396 5.396 2 C 0.307 3.693 3 O -0.467 6.467 4 C 0.042 3.958 5 N -0.340 5.340 6 C 0.303 3.697 7 O -0.446 6.446 8 C -0.131 4.131 9 C -0.065 4.065 10 C -0.108 4.108 11 C -0.126 4.126 12 C 0.029 3.971 13 N -0.067 5.067 14 C -0.149 4.149 15 C -0.224 4.224 16 C -0.252 4.252 17 C -0.088 4.088 18 C -0.165 4.165 19 O -0.367 6.367 20 Si 0.722 3.278 21 C -0.148 4.148 22 C -0.113 4.113 23 C -0.202 4.202 24 C 0.036 3.964 25 H 0.110 0.890 26 O -0.360 6.360 27 C -0.146 4.146 28 H 0.245 0.755 29 H 0.236 0.764 30 H 0.265 0.735 31 H 0.151 0.849 32 H 0.160 0.840 33 H 0.168 0.832 34 H 0.141 0.859 35 H 0.194 0.806 36 H 0.174 0.826 37 H 0.159 0.841 38 H 0.109 0.891 39 H 0.255 0.745 40 H -0.237 1.237 41 H -0.215 1.215 42 H 0.138 0.862 43 H 0.160 0.840 44 H 0.107 0.893 45 H 0.084 0.916 46 H 0.249 0.751 47 H 0.135 0.865 48 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -5.125 -8.007 -6.561 11.551 hybrid contribution 0.784 0.799 0.546 1.245 sum -4.341 -7.208 -6.015 10.343 Atomic orbital electron populations 1.43672 1.06439 1.13974 1.75531 1.20969 0.83542 0.91008 0.73759 1.90733 1.69453 1.34782 1.51762 1.21362 0.92657 0.85826 0.95967 1.45439 1.59842 1.22640 1.06110 1.21143 0.77701 0.88555 0.82342 1.90827 1.49911 1.30920 1.72911 1.20742 1.06269 0.97265 0.88856 1.19570 0.93742 0.97945 0.95243 1.21087 0.99042 0.96681 0.94002 1.20967 0.97357 1.00228 0.94056 1.17792 0.97177 1.00412 0.81686 1.41635 1.20245 1.37874 1.06910 1.22330 0.97324 1.01042 0.94177 1.21153 0.98751 1.06196 0.96268 1.20845 1.00856 1.06480 0.96980 1.20596 0.95157 1.03702 0.89388 1.24641 0.94154 0.91006 1.06704 1.86484 1.41960 1.42225 1.66009 0.94611 0.82253 0.79044 0.71862 1.21090 0.97780 0.98909 0.97026 1.21055 0.98656 0.99343 0.92263 1.23932 0.93708 1.01434 1.01151 1.22592 0.98486 0.81893 0.93446 0.89018 1.86342 1.41651 1.27418 1.80574 1.23301 0.96468 1.02577 0.92234 0.75515 0.76444 0.73465 0.84864 0.83974 0.83187 0.85922 0.80569 0.82583 0.84119 0.89099 0.74510 1.23667 1.21503 0.86245 0.84011 0.89301 0.91648 0.75124 0.86511 0.86636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 1.48 8.83 -173.53 -1.53 -0.05 16 2 C 0.52 3.10 6.47 87.66 0.57 3.67 16 3 O -0.59 -9.79 16.74 -3.05 -0.05 -9.84 16 4 C 0.13 -0.09 0.96 3.38 0.00 -0.09 16 5 N -0.68 4.31 4.10 -423.92 -1.74 2.57 16 6 C 0.51 -0.66 7.32 87.66 0.64 -0.02 16 7 O -0.57 -5.96 14.81 -3.03 -0.04 -6.00 16 8 C -0.09 0.73 5.83 29.10 0.17 0.90 16 9 C -0.06 0.02 4.37 -19.85 -0.09 -0.07 16 10 C -0.09 -0.07 9.69 22.25 0.22 0.15 16 11 C -0.11 -0.56 8.53 22.38 0.19 -0.37 16 12 C 0.12 1.04 4.67 38.08 0.18 1.22 16 13 N -0.39 -4.39 2.84 -333.41 -0.95 -5.33 16 14 C -0.02 -0.22 11.21 83.18 0.93 0.71 16 15 C -0.20 -2.09 10.86 22.15 0.24 -1.85 16 16 C -0.23 -2.56 9.40 22.15 0.21 -2.35 16 17 C 0.02 0.22 6.12 41.04 0.25 0.48 16 18 C -0.06 -0.12 2.48 71.24 0.18 0.06 16 19 O -0.56 -0.43 10.84 -148.98 -1.61 -2.05 16 20 Si 0.82 -0.24 30.99 68.60 2.13 1.89 16 21 C -0.13 -0.93 9.76 22.39 0.22 -0.71 16 22 C -0.09 -0.26 9.69 22.25 0.22 -0.05 16 23 C -0.16 -0.42 6.72 31.21 0.21 -0.21 16 24 C 0.10 -0.48 5.28 31.21 0.16 -0.31 16 25 H 0.09 -0.65 8.14 -2.38 -0.02 -0.67 16 26 O -0.55 3.78 13.09 -148.98 -1.95 1.83 16 27 C -0.11 0.66 7.19 31.12 0.22 0.88 16 28 H 0.41 -3.52 8.34 -92.71 -0.77 -4.29 16 29 H 0.40 -0.90 8.93 -92.70 -0.83 -1.73 16 30 H 0.43 -5.59 8.66 -92.70 -0.80 -6.39 16 31 H 0.13 -1.63 8.08 -2.39 -0.02 -1.65 16 32 H 0.14 -2.12 8.08 -2.39 -0.02 -2.13 16 33 H 0.15 -0.72 8.06 -2.91 -0.02 -0.74 16 34 H 0.12 0.53 8.06 -2.91 -0.02 0.50 16 35 H 0.18 1.19 8.06 -2.91 -0.02 1.16 16 36 H 0.16 0.98 8.06 -2.91 -0.02 0.96 16 37 H 0.14 1.32 6.53 -2.91 -0.02 1.30 16 38 H 0.09 -0.18 7.96 -2.39 -0.02 -0.19 16 39 H 0.40 -4.17 8.74 -74.06 -0.65 -4.82 16 40 H -0.31 -2.78 7.11 99.48 0.71 -2.07 16 41 H -0.29 -1.40 6.96 99.48 0.69 -0.71 16 42 H 0.12 0.86 8.06 -2.91 -0.02 0.83 16 43 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 44 H 0.09 0.63 7.35 -2.39 -0.02 0.62 16 45 H 0.06 0.40 7.56 -2.39 -0.02 0.39 16 46 H 0.40 -4.91 9.12 -74.06 -0.68 -5.59 16 47 H 0.12 -1.23 8.09 -2.39 -0.02 -1.25 16 48 H 0.12 -0.67 8.09 -2.38 -0.02 -0.69 16 Total: 0.00 -38.64 404.87 -3.67 -42.31 By element: Atomic # 1 Polarization: -24.72 SS G_CDS: -2.64 Total: -27.36 kcal Atomic # 6 Polarization: -2.68 SS G_CDS: 4.72 Total: 2.04 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -4.22 Total: -2.82 kcal Atomic # 8 Polarization: -12.40 SS G_CDS: -3.66 Total: -16.06 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.13 Total: 1.89 kcal Total: -38.64 -3.67 -42.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287746.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.806 kcal (2) G-P(sol) polarization free energy of solvation -38.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds