Wall clock time and date at job start Sun Mar 7 2021 04:59:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21276 * 119.99554 * 2 1 4 4 C 1.50697 * 120.00047 * 179.72256 * 2 1 3 5 5 N 1.46506 * 112.85102 * 47.92469 * 4 2 1 6 6 C 1.34777 * 119.99582 * 57.37226 * 5 4 2 7 7 O 1.21545 * 120.00175 * 354.84915 * 6 5 4 8 8 C 1.47843 * 119.99819 * 174.84897 * 6 5 4 9 9 C 1.39972 * 120.56433 * 179.72171 * 8 6 5 10 10 C 1.38405 * 118.29403 * 179.78065 * 9 8 6 11 11 C 1.50702 * 120.35017 * 180.26291 * 10 9 8 12 12 O 1.42889 * 109.47198 * 65.21493 * 11 10 9 13 13 Si 1.86300 * 109.46981 * 185.22055 * 11 10 9 14 14 C 1.38306 * 119.29822 * 0.47328 * 10 9 8 15 15 N 1.31954 * 121.08564 * 359.77258 * 14 10 9 16 16 C 1.31663 * 121.87951 * 359.97438 * 15 14 10 17 17 C 1.53782 * 113.61355 * 276.72932 * 4 2 1 18 18 C 1.53784 * 87.08106 * 270.88338 * 17 4 2 19 19 H 1.09001 * 113.61372 * 89.11647 * 18 17 4 20 20 O 1.42894 * 113.61411 * 219.93576 * 18 17 4 21 21 C 1.53783 * 113.61450 * 179.23123 * 4 2 1 22 22 H 0.96997 * 119.99882 * 185.24405 * 1 2 3 23 23 H 0.96999 * 119.99865 * 5.24656 * 1 2 3 24 24 H 0.96997 * 119.99825 * 237.37797 * 5 4 2 25 25 H 1.08007 * 120.85337 * 0.02562 * 9 8 6 26 26 H 1.09008 * 109.46693 * 305.21244 * 11 10 9 27 27 H 0.96705 * 114.00316 * 59.99969 * 12 11 10 28 28 H 1.48492 * 110.00031 * 179.97438 * 13 11 10 29 29 H 1.48502 * 109.99655 * 301.31506 * 13 11 10 30 30 H 1.08006 * 119.45594 * 179.74297 * 14 10 9 31 31 H 1.08001 * 119.71848 * 180.02562 * 16 15 14 32 32 H 1.08997 * 113.61737 * 25.43578 * 17 4 2 33 33 H 1.09001 * 113.61454 * 156.33603 * 17 4 2 34 34 H 0.96700 * 113.99992 * 179.97438 * 20 18 17 35 35 H 1.09004 * 113.61165 * 203.66475 * 21 4 2 36 36 H 1.08997 * 113.61420 * 334.56968 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1013 -1.3051 0.0063 5 7 1.6023 -2.2550 -0.9912 6 6 1.5729 -1.9107 -2.2939 7 8 1.8714 -0.7817 -2.6311 8 6 1.1776 -2.9063 -3.3129 9 6 1.1374 -2.5600 -4.6684 10 6 0.7652 -3.5301 -5.5827 11 6 0.7120 -3.2094 -7.0542 12 8 2.0288 -2.9179 -7.5261 13 14 0.0284 -4.6717 -7.9842 14 6 0.4385 -4.7959 -5.1311 15 7 0.4804 -5.0927 -3.8460 16 6 0.8329 -4.2060 -2.9387 17 6 2.2663 -1.9143 1.4086 18 6 3.5669 -1.1016 1.5228 19 1 3.4225 -0.1020 1.9328 20 8 4.6324 -1.8125 2.1561 21 6 3.6295 -1.1342 -0.0134 22 1 -0.4850 -0.8365 0.0768 23 1 -0.4850 0.8365 -0.0768 24 1 1.2930 -3.1315 -0.7140 25 1 1.3941 -1.5623 -4.9931 26 1 0.0687 -2.3440 -7.2143 27 1 2.6564 -3.6452 -7.4152 28 1 -0.0298 -4.3679 -9.4365 29 1 0.8787 -5.8662 -7.7484 30 1 0.1437 -5.5538 -5.8419 31 1 0.8556 -4.4869 -1.8961 32 1 1.4944 -1.6043 2.1130 33 1 2.4247 -2.9927 1.4003 34 1 5.4532 -1.3067 2.2304 35 1 4.1605 -1.9993 -0.4105 36 1 3.9581 -0.1943 -0.4570 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13287814.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:13 Heat of formation + Delta-G solvation = -86.090949 kcal Electronic energy + Delta-G solvation = -23802.656589 eV Core-core repulsion = 20061.363866 eV Total energy + Delta-G solvation = -3741.292723 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.109 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.49706 -41.60398 -39.93514 -39.03581 -38.09905 -36.52971 -34.82817 -34.42855 -33.81821 -32.74328 -27.36305 -27.16769 -27.03038 -25.28801 -23.92784 -23.09696 -21.61192 -20.51781 -19.50699 -19.17847 -18.37287 -18.12609 -17.97302 -17.86635 -17.50381 -16.78776 -16.53765 -16.13459 -16.06424 -15.73702 -15.55076 -15.22961 -14.97440 -14.56432 -14.43356 -14.25038 -13.80906 -13.58929 -13.47777 -13.36524 -12.83545 -12.58905 -12.10362 -11.91640 -11.58006 -11.46093 -11.12504 -10.98254 -10.79289 -10.72106 -10.58538 -10.47774 -10.26212 -4.95437 -0.61588 -0.05398 1.18533 1.24707 1.53512 1.56649 1.80238 1.95656 2.29662 2.58902 3.05755 3.10034 3.20685 3.29774 3.32576 3.37645 3.60879 3.62140 3.69332 3.71640 3.82241 4.06351 4.09322 4.26718 4.51303 4.53930 4.63022 4.73668 4.78990 4.81257 4.84749 4.91738 5.14208 5.30207 5.72627 6.17660 6.30718 6.39016 6.63529 6.74671 6.91237 7.15694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.831 5.831 2 C 0.536 3.464 3 O -0.575 6.575 4 C 0.131 3.869 5 N -0.688 5.688 6 C 0.566 3.434 7 O -0.560 6.560 8 C -0.195 4.195 9 C -0.001 4.001 10 C -0.173 4.173 11 C -0.085 4.085 12 O -0.548 6.548 13 Si 0.777 3.223 14 C 0.131 3.869 15 N -0.491 5.491 16 C 0.152 3.848 17 C -0.101 4.101 18 C 0.082 3.918 19 H 0.083 0.917 20 O -0.565 6.565 21 C -0.159 4.159 22 H 0.417 0.583 23 H 0.409 0.591 24 H 0.426 0.574 25 H 0.132 0.868 26 H 0.127 0.873 27 H 0.388 0.612 28 H -0.300 1.300 29 H -0.269 1.269 30 H 0.183 0.817 31 H 0.198 0.802 32 H 0.107 0.893 33 H 0.135 0.865 34 H 0.398 0.602 35 H 0.106 0.894 36 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.428 -7.228 3.094 9.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.319 3.681 3 O -0.453 6.453 4 C 0.040 3.960 5 N -0.345 5.345 6 C 0.353 3.647 7 O -0.438 6.438 8 C -0.200 4.200 9 C -0.028 4.028 10 C -0.176 4.176 11 C -0.193 4.193 12 O -0.357 6.357 13 Si 0.681 3.319 14 C -0.025 4.025 15 N -0.199 5.199 16 C -0.006 4.006 17 C -0.139 4.139 18 C 0.022 3.978 19 H 0.101 0.899 20 O -0.373 6.373 21 C -0.198 4.198 22 H 0.248 0.752 23 H 0.240 0.760 24 H 0.268 0.732 25 H 0.150 0.850 26 H 0.145 0.855 27 H 0.237 0.763 28 H -0.228 1.228 29 H -0.196 1.196 30 H 0.199 0.801 31 H 0.215 0.785 32 H 0.126 0.874 33 H 0.153 0.847 34 H 0.248 0.752 35 H 0.124 0.876 36 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -5.472 -7.209 2.435 9.372 hybrid contribution 1.511 1.528 -0.493 2.205 sum -3.961 -5.680 1.941 7.192 Atomic orbital electron populations 1.43589 1.06000 1.14325 1.75495 1.20210 0.83603 0.89978 0.74352 1.90746 1.69307 1.34355 1.50916 1.21407 0.94474 0.88237 0.91845 1.45552 1.65800 1.18744 1.04379 1.18345 0.76547 0.86831 0.82942 1.90887 1.49160 1.22395 1.81334 1.20882 1.08460 0.96468 0.94217 1.21638 0.89881 0.99856 0.91405 1.21330 1.03394 0.95039 0.97789 1.25312 0.88397 1.13592 0.92022 1.86622 1.20473 1.44397 1.84167 0.94057 0.88026 0.72941 0.76899 1.23264 0.91705 0.94408 0.93098 1.67844 1.14297 1.35518 1.02224 1.23542 0.89410 0.86644 1.01023 1.23383 0.96537 1.03146 0.90806 1.23050 0.88792 0.95660 0.90268 0.89925 1.86430 1.24488 1.45038 1.81344 1.23968 0.93616 1.03382 0.98874 0.75235 0.75974 0.73225 0.84966 0.85511 0.76290 1.22799 1.19553 0.80083 0.78506 0.87423 0.84691 0.75201 0.87562 0.92278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.31 8.83 -173.53 -1.53 0.77 16 2 C 0.54 2.70 5.65 87.65 0.49 3.19 16 3 O -0.58 -8.88 16.54 -3.02 -0.05 -8.93 16 4 C 0.13 -0.13 1.02 3.38 0.00 -0.12 16 5 N -0.69 3.70 5.18 -426.76 -2.21 1.49 16 6 C 0.57 1.22 7.50 86.79 0.65 1.87 16 7 O -0.56 -7.10 15.37 -3.86 -0.06 -7.16 16 8 C -0.20 0.17 5.89 -19.99 -0.12 0.06 16 9 C 0.00 0.00 9.38 22.73 0.21 0.21 16 10 C -0.17 0.37 5.35 -19.81 -0.11 0.26 16 11 C -0.08 0.23 2.82 71.24 0.20 0.43 16 12 O -0.55 -0.87 12.84 -148.98 -1.91 -2.79 16 13 Si 0.78 -4.22 29.91 68.60 2.05 -2.17 16 14 C 0.13 -0.49 9.84 84.69 0.83 0.35 16 15 N -0.49 1.21 10.35 -194.75 -2.01 -0.80 16 16 C 0.15 -0.84 10.71 85.04 0.91 0.07 16 17 C -0.10 0.63 7.19 31.12 0.22 0.86 16 18 C 0.08 -0.03 4.85 31.12 0.15 0.12 16 19 H 0.08 0.14 8.02 -2.39 -0.02 0.12 16 20 O -0.57 0.30 13.67 -148.98 -2.04 -1.74 16 21 C -0.16 -0.46 6.94 31.12 0.22 -0.24 16 22 H 0.42 -4.11 8.81 -92.71 -0.82 -4.93 16 23 H 0.41 -1.24 8.93 -92.71 -0.83 -2.06 16 24 H 0.43 -5.91 6.75 -92.71 -0.63 -6.53 16 25 H 0.13 0.69 7.74 -2.91 -0.02 0.67 16 26 H 0.13 -0.47 7.96 -2.38 -0.02 -0.49 16 27 H 0.39 -1.73 8.70 -74.05 -0.64 -2.37 16 28 H -0.30 -0.90 7.11 99.48 0.71 -0.19 16 29 H -0.27 0.79 7.01 99.48 0.70 1.49 16 30 H 0.18 -1.48 4.84 -2.91 -0.01 -1.49 16 31 H 0.20 -2.77 6.44 -2.91 -0.02 -2.79 16 32 H 0.11 -0.98 8.09 -2.39 -0.02 -1.00 16 33 H 0.14 -1.40 8.14 -2.39 -0.02 -1.42 16 34 H 0.40 -2.72 9.12 -74.06 -0.68 -3.39 16 35 H 0.11 0.15 8.14 -2.39 -0.02 0.13 16 36 H 0.06 0.60 7.45 -2.39 -0.02 0.58 16 Total: 0.00 -31.51 313.07 -6.45 -37.96 By element: Atomic # 1 Polarization: -21.33 SS G_CDS: -2.35 Total: -23.68 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 3.67 Total: 7.04 kcal Atomic # 7 Polarization: 7.22 SS G_CDS: -5.76 Total: 1.46 kcal Atomic # 8 Polarization: -16.55 SS G_CDS: -4.06 Total: -20.61 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.05 Total: -2.17 kcal Total: -31.51 -6.45 -37.96 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287814.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.133 kcal (2) G-P(sol) polarization free energy of solvation -31.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.958 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds