Wall clock time and date at job start Sun Mar 7 2021 04:59:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.36408 * 125.80256 * 2 1 4 4 C 1.47378 * 127.19298 * 0.02562 * 3 2 1 5 5 O 1.21609 * 119.99857 * 359.70391 * 4 3 2 6 6 N 1.34774 * 120.00111 * 179.70821 * 4 3 2 7 7 C 1.46497 * 120.00204 * 174.85040 * 6 4 3 8 8 C 1.50694 * 112.85131 * 57.80621 * 7 6 4 9 9 N 1.34782 * 119.99960 * 35.43893 * 8 7 6 10 10 O 1.21283 * 120.00678 * 215.44127 * 8 7 6 11 11 C 1.53784 * 113.61425 * 286.61494 * 7 6 4 12 12 C 1.54058 * 86.98526 * 219.97779 * 11 7 6 13 13 H 1.08991 * 113.60925 * 270.88108 * 12 11 7 14 14 O 1.42903 * 113.69134 * 139.98700 * 12 11 7 15 15 C 1.53781 * 87.07420 * 25.43289 * 12 11 7 16 16 C 1.47026 * 105.61586 * 179.75373 * 3 2 1 17 17 C 1.34174 * 105.95339 * 0.22588 * 16 3 2 18 18 C 1.50703 * 125.43812 * 180.02562 * 17 16 3 19 19 O 1.42898 * 109.46979 * 299.99666 * 18 17 16 20 20 Si 1.86300 * 109.47177 * 180.02562 * 18 17 16 21 21 O 1.33662 * 125.80130 * 180.14209 * 2 1 3 22 22 H 1.09002 * 109.47479 * 90.00274 * 1 2 3 23 23 H 1.09004 * 109.47478 * 209.99778 * 1 2 3 24 24 H 1.08998 * 109.47500 * 330.00029 * 1 2 3 25 25 H 0.97004 * 120.00394 * 354.85515 * 6 4 3 26 26 H 0.96993 * 120.00551 * 174.98721 * 9 8 7 27 27 H 0.97008 * 119.99495 * 354.72220 * 9 8 7 28 28 H 1.09007 * 113.61626 * 334.47711 * 11 7 6 29 29 H 1.08996 * 113.61901 * 105.38199 * 11 7 6 30 30 H 0.96702 * 113.99592 * 82.47453 * 14 12 11 31 31 H 1.09008 * 113.60841 * 220.02402 * 15 12 11 32 32 H 1.08997 * 113.69505 * 89.13195 * 15 12 11 33 33 H 1.08005 * 127.02379 * 180.24546 * 16 3 2 34 34 H 1.08989 * 109.47540 * 59.99705 * 18 17 16 35 35 H 0.96703 * 114.00559 * 179.97438 * 19 18 17 36 36 H 1.48497 * 110.00382 * 59.99349 * 20 18 17 37 37 H 1.48500 * 110.00028 * 181.31638 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1063 0.0000 4 6 1.8739 2.5157 0.0005 5 8 0.6890 2.7891 -0.0044 6 7 2.7930 3.5014 0.0064 7 6 2.3688 4.8991 -0.1069 8 6 1.4107 5.3099 0.9812 9 7 1.5477 4.8081 2.2246 10 8 0.5163 6.0922 0.7382 11 6 1.9006 5.2881 -1.5191 12 6 2.6337 6.6262 -1.3054 13 1 2.0130 7.3954 -0.8459 14 8 3.3280 7.0921 -2.4642 15 6 3.5344 5.8825 -0.3051 16 6 3.6849 0.5990 0.0061 17 6 3.5858 -0.7391 0.0040 18 6 4.7458 -1.7012 0.0090 19 8 5.5486 -1.4854 -1.1533 20 14 4.1026 -3.4496 0.0028 21 8 2.2888 -1.0841 -0.0027 22 1 -0.3634 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3634 0.8899 0.5138 25 1 3.7354 3.2855 0.0856 26 1 0.9777 5.1267 2.9418 27 1 2.2138 4.1254 2.4013 28 1 2.3347 4.6737 -2.3079 29 1 0.8191 5.3905 -1.6079 30 1 2.7666 7.5607 -3.0971 31 1 3.7710 6.4644 0.5857 32 1 4.4149 5.4298 -0.7612 33 1 4.5928 1.1839 0.0115 34 1 5.3488 -1.5387 0.9023 35 1 6.3156 -2.0710 -1.2159 36 1 3.2790 -3.6836 -1.2105 37 1 5.2363 -4.4080 0.0398 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13308374.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:16 Heat of formation + Delta-G solvation = -98.368956 kcal Electronic energy + Delta-G solvation = -24728.265952 eV Core-core repulsion = 20861.410675 eV Total energy + Delta-G solvation = -3866.855278 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.114 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -43.77972 -42.17137 -39.82517 -38.85878 -38.20435 -36.37960 -34.75728 -34.38194 -33.61581 -33.11216 -29.57698 -27.05866 -26.93051 -25.57497 -24.16904 -22.97741 -22.05646 -20.75813 -20.27449 -19.04318 -18.97095 -18.46848 -18.26443 -17.69768 -17.33901 -17.06677 -16.70746 -16.13677 -15.90464 -15.69266 -15.59754 -15.34144 -14.97571 -14.67456 -14.24936 -14.19269 -14.03469 -13.88872 -13.68926 -13.52556 -13.25989 -13.19655 -12.68055 -12.48962 -12.15043 -11.84859 -11.26782 -11.15094 -10.95681 -10.83511 -10.72061 -10.64558 -10.18453 -9.58223 -5.07112 0.24669 0.76135 1.05801 1.28472 1.47008 1.61020 1.87064 1.94926 2.21349 2.42539 3.10372 3.16865 3.20380 3.34895 3.40117 3.64685 3.69252 3.69583 3.85335 4.03254 4.12697 4.16259 4.38209 4.50482 4.53274 4.55827 4.61167 4.75491 4.77090 4.92696 5.00784 5.08688 5.17916 5.25682 5.79089 5.89819 6.16726 6.26120 6.35809 6.64852 7.09311 7.25123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.101 3.899 3 C -0.255 4.255 4 C 0.593 3.407 5 O -0.521 6.521 6 N -0.713 5.713 7 C 0.129 3.871 8 C 0.547 3.453 9 N -0.845 5.845 10 O -0.528 6.528 11 C -0.151 4.151 12 C 0.083 3.917 13 H 0.097 0.903 14 O -0.557 6.557 15 C -0.116 4.116 16 C -0.146 4.146 17 C -0.007 4.007 18 C -0.037 4.037 19 O -0.533 6.533 20 Si 0.698 3.302 21 O -0.166 6.166 22 H 0.093 0.907 23 H 0.084 0.916 24 H 0.111 0.889 25 H 0.407 0.593 26 H 0.405 0.595 27 H 0.400 0.600 28 H 0.101 0.899 29 H 0.090 0.910 30 H 0.385 0.615 31 H 0.088 0.912 32 H 0.111 0.889 33 H 0.158 0.842 34 H 0.098 0.902 35 H 0.389 0.611 36 H -0.252 1.252 37 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.451 -3.391 3.921 6.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.048 3.952 3 C -0.259 4.259 4 C 0.382 3.618 5 O -0.398 6.398 6 N -0.368 5.368 7 C 0.039 3.961 8 C 0.329 3.671 9 N -0.408 5.408 10 O -0.403 6.403 11 C -0.190 4.190 12 C 0.024 3.976 13 H 0.115 0.885 14 O -0.363 6.363 15 C -0.154 4.154 16 C -0.166 4.166 17 C -0.055 4.055 18 C -0.146 4.146 19 O -0.342 6.342 20 Si 0.596 3.404 21 O -0.063 6.063 22 H 0.111 0.889 23 H 0.102 0.898 24 H 0.129 0.871 25 H 0.243 0.757 26 H 0.236 0.764 27 H 0.228 0.772 28 H 0.119 0.881 29 H 0.109 0.891 30 H 0.233 0.767 31 H 0.107 0.893 32 H 0.129 0.871 33 H 0.176 0.824 34 H 0.116 0.884 35 H 0.239 0.761 36 H -0.175 1.175 37 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 3.024 -3.562 3.334 5.740 hybrid contribution 1.389 0.106 -0.427 1.457 sum 4.414 -3.456 2.907 6.315 Atomic orbital electron populations 1.20721 0.83199 1.05533 1.04891 1.22909 0.94024 0.82708 0.95576 1.20991 0.93291 0.93390 1.18269 1.17252 0.85420 0.83688 0.75481 1.90842 1.16254 1.83689 1.49018 1.45723 1.10446 1.04215 1.76402 1.21544 0.96784 0.81794 0.95962 1.19747 0.83979 0.80145 0.83181 1.43658 1.41832 1.44476 1.10799 1.90766 1.32309 1.35607 1.81610 1.23998 1.03251 0.97626 0.94166 1.23188 0.93192 0.94192 0.87060 0.88531 1.86468 1.39590 1.77432 1.32785 1.23315 0.96590 0.95661 0.99832 1.22518 0.96322 0.93424 1.04309 1.20948 0.82095 0.94113 1.08346 1.23774 0.90847 1.08774 0.91198 1.86553 1.42209 1.62399 1.43060 0.94458 0.83578 0.72951 0.89373 1.83662 1.16185 1.35055 1.71438 0.88899 0.89766 0.87061 0.75678 0.76364 0.77190 0.88108 0.89103 0.76712 0.89339 0.87094 0.82399 0.88440 0.76126 1.17542 1.17592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.02 9.89 36.00 0.36 0.38 16 2 C 0.10 0.14 7.37 -34.97 -0.26 -0.12 16 3 C -0.26 -0.33 6.31 -103.28 -0.65 -0.98 16 4 C 0.59 1.11 7.47 -12.54 -0.09 1.02 16 5 O -0.52 -2.56 13.80 5.27 0.07 -2.49 16 6 N -0.71 0.53 4.69 -49.00 -0.23 0.30 16 7 C 0.13 0.09 1.10 -132.16 -0.14 -0.06 16 8 C 0.55 1.51 5.82 -10.99 -0.06 1.44 16 9 N -0.84 0.29 8.77 31.22 0.27 0.57 16 10 O -0.53 -3.49 16.19 5.55 0.09 -3.40 16 11 C -0.15 -0.27 6.90 -25.77 -0.18 -0.45 16 12 C 0.08 0.07 4.83 -25.77 -0.12 -0.06 16 13 H 0.10 0.13 7.60 -51.93 -0.39 -0.27 16 14 O -0.56 -0.52 13.68 -35.23 -0.48 -1.00 16 15 C -0.12 0.10 7.19 -25.92 -0.19 -0.09 16 16 C -0.15 0.00 10.46 -37.45 -0.39 -0.39 16 17 C -0.01 0.00 6.24 -35.74 -0.22 -0.23 16 18 C -0.04 0.06 2.97 36.01 0.11 0.17 16 19 O -0.53 0.37 12.84 -35.23 -0.45 -0.09 16 20 Si 0.70 -1.14 32.08 -169.99 -5.45 -6.60 16 21 O -0.17 -0.22 8.89 7.64 0.07 -0.15 16 22 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 24 H 0.11 0.09 6.49 -51.93 -0.34 -0.25 16 25 H 0.41 -1.36 7.85 -40.82 -0.32 -1.68 16 26 H 0.41 -0.46 8.93 -40.82 -0.36 -0.82 16 27 H 0.40 -0.99 8.31 -40.82 -0.34 -1.33 16 28 H 0.10 0.17 8.14 -51.93 -0.42 -0.25 16 29 H 0.09 0.35 7.65 -51.93 -0.40 -0.05 16 30 H 0.38 -1.04 9.12 45.56 0.42 -0.62 16 31 H 0.09 -0.15 8.09 -51.92 -0.42 -0.57 16 32 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.16 -0.37 7.75 -52.48 -0.41 -0.78 16 34 H 0.10 -0.42 7.96 -51.94 -0.41 -0.83 16 35 H 0.39 -1.93 8.74 45.56 0.40 -1.53 16 36 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 37 H -0.25 0.11 7.11 56.52 0.40 0.51 16 LS Contribution 322.76 15.07 4.86 4.86 Total: 0.00 -11.20 322.76 -6.57 -17.77 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -3.47 Total: -10.41 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -1.85 Total: 0.64 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: 0.04 Total: 0.86 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -0.70 Total: -7.13 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.45 Total: -6.60 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -11.20 -6.57 -17.77 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13308374.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.602 kcal (2) G-P(sol) polarization free energy of solvation -11.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.767 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds