Wall clock time and date at job start Sun Mar 7 2021 04:59:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21281 * 120.00219 * 2 1 4 4 C 1.50697 * 119.99438 * 180.28023 * 2 1 3 5 5 N 1.46502 * 112.85016 * 312.67798 * 4 2 1 6 6 C 1.34776 * 120.00047 * 298.02484 * 5 4 2 7 7 O 1.21592 * 119.99740 * 354.98009 * 6 5 4 8 8 C 1.47556 * 119.99876 * 174.98164 * 6 5 4 9 9 C 1.39834 * 119.99990 * 359.72328 * 8 6 5 10 10 C 1.36569 * 119.99422 * 179.78735 * 9 8 6 11 11 C 1.39815 * 120.00205 * 0.46562 * 10 9 8 12 12 C 1.47561 * 120.00153 * 179.76504 * 11 10 9 13 13 C 1.34977 * 125.27456 * 359.74036 * 12 11 10 14 14 C 1.37798 * 114.70321 * 179.85974 * 13 12 11 15 15 C 1.33739 * 115.08061 * 0.43230 * 14 13 12 16 16 C 1.50699 * 125.12235 * 179.76495 * 15 14 13 17 17 O 1.42901 * 109.47141 * 300.03123 * 16 15 14 18 18 Si 1.86296 * 109.47291 * 180.02562 * 16 15 14 19 19 S 1.75862 * 109.76171 * 359.77157 * 15 14 13 20 20 C 1.39825 * 120.00487 * 359.78861 * 11 10 9 21 21 C 1.36563 * 120.00065 * 359.97438 * 20 11 10 22 22 C 1.53788 * 113.61149 * 181.37156 * 4 2 1 23 23 C 1.53779 * 87.08161 * 220.01587 * 22 4 2 24 24 H 1.09000 * 113.68917 * 139.99116 * 23 22 4 25 25 O 1.42900 * 113.62102 * 270.88532 * 23 22 4 26 26 C 1.53783 * 113.61755 * 83.87702 * 4 2 1 27 27 H 0.96995 * 120.00048 * 184.73973 * 1 2 3 28 28 H 0.97005 * 119.99404 * 4.74278 * 1 2 3 29 29 H 0.97000 * 119.99493 * 118.03348 * 5 4 2 30 30 H 1.07996 * 120.00243 * 0.02852 * 9 8 6 31 31 H 1.08001 * 119.99745 * 180.23551 * 10 9 8 32 32 H 1.08004 * 122.64575 * 0.02562 * 13 12 11 33 33 H 1.08005 * 122.46051 * 180.18016 * 14 13 12 34 34 H 1.09005 * 109.46861 * 60.02252 * 16 15 14 35 35 H 0.96706 * 114.00010 * 299.99584 * 17 16 15 36 36 H 1.48504 * 110.00008 * 180.02562 * 18 16 15 37 37 H 1.48494 * 110.00221 * 301.31974 * 18 16 15 38 38 H 1.08002 * 120.00314 * 179.97438 * 20 11 10 39 39 H 1.08001 * 120.00543 * 180.02562 * 21 20 11 40 40 H 1.08997 * 113.61496 * 334.56928 * 22 4 2 41 41 H 1.09004 * 113.61210 * 105.47213 * 22 4 2 42 42 H 0.96695 * 113.99678 * 277.50176 * 25 23 22 43 43 H 1.08995 * 113.61390 * 254.52765 * 26 4 2 44 44 H 1.09002 * 113.61138 * 25.42734 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1011 -1.3051 -0.0064 5 7 1.5929 -2.2602 0.9815 6 6 1.6375 -1.9595 2.2945 7 8 2.1814 -0.9374 2.6660 8 6 1.0263 -2.8706 3.2812 9 6 0.3958 -4.0432 2.8534 10 6 -0.1661 -4.8885 3.7671 11 6 -0.1194 -4.5768 5.1292 12 6 -0.7310 -5.4877 6.1160 13 6 -1.3647 -6.6428 5.8226 14 6 -1.8522 -7.3259 6.9155 15 6 -1.6320 -6.7376 8.0962 16 6 -2.0701 -7.2821 9.4314 17 8 -3.4929 -7.4141 9.4483 18 14 -1.5385 -6.1151 10.7827 19 16 -0.7542 -5.2327 7.8562 20 6 0.5065 -3.4017 5.5566 21 6 1.0726 -2.5587 4.6435 22 6 3.6291 -1.1345 0.0282 23 6 3.7027 -2.2954 -0.9777 24 1 4.4504 -2.1521 -1.7578 25 8 3.7828 -3.5824 -0.3620 26 6 2.2790 -1.9070 -1.4103 27 1 -0.4850 -0.8371 0.0694 28 1 -0.4849 0.8373 -0.0695 29 1 1.2245 -3.1090 0.6905 30 1 0.3565 -4.2821 1.8010 31 1 -0.6498 -5.7960 3.4371 32 1 -1.4781 -7.0045 4.8113 33 1 -2.3774 -8.2653 6.8250 34 1 -1.6128 -8.2582 9.5934 35 1 -3.9668 -6.5825 9.3099 36 1 -1.9642 -6.6411 12.1046 37 1 -0.0637 -5.9446 10.7555 38 1 0.5422 -3.1608 6.6088 39 1 1.5564 -1.6512 4.9735 40 1 3.9715 -0.1826 -0.3777 41 1 4.0726 -1.3671 0.9964 42 1 4.6757 -3.8322 -0.0877 43 1 1.6325 -2.7630 -1.6035 44 1 2.2522 -1.1662 -2.2095 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13308390.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:20 Heat of formation + Delta-G solvation = -51.930593 kcal Electronic energy + Delta-G solvation = -30844.436807 eV Core-core repulsion = 26435.223746 eV Total energy + Delta-G solvation = -4409.213061 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.102 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.28744 -40.87557 -39.63913 -39.17429 -38.87710 -37.42330 -36.17149 -34.68603 -34.23213 -33.23088 -32.24202 -30.50385 -27.64352 -27.07302 -26.61665 -24.76372 -24.02380 -23.47986 -22.42458 -21.81416 -20.39419 -20.31200 -19.34939 -19.06294 -18.65306 -18.07866 -17.86618 -17.61571 -16.84381 -16.69647 -16.36421 -16.26712 -16.12457 -15.89111 -15.75140 -15.56762 -15.33721 -15.11570 -14.81015 -14.51729 -14.48781 -14.25994 -13.95647 -13.87445 -13.67214 -13.64146 -13.33998 -13.17397 -13.07344 -12.61633 -12.52817 -12.25953 -12.14265 -11.82181 -11.62624 -11.30327 -11.09747 -10.85868 -10.83004 -10.65015 -10.57619 -10.25689 -10.04681 -9.60406 -9.08218 -5.21536 -0.93311 0.21185 0.27908 0.33035 0.70407 1.16441 1.44546 1.49220 1.56315 1.84213 1.94172 1.98192 2.48479 2.78863 2.84443 3.21367 3.29067 3.35589 3.43258 3.56919 3.60888 3.62788 3.67702 3.74826 3.87810 4.10583 4.20069 4.27277 4.29119 4.38667 4.45009 4.46521 4.49304 4.54667 4.72038 4.82025 4.82990 4.92811 5.02239 5.04004 5.17218 5.21907 5.24390 5.32366 5.40542 5.66231 5.80263 6.26603 6.38147 6.40431 6.51607 7.11520 7.27724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.850 5.850 2 C 0.530 3.470 3 O -0.525 6.525 4 C 0.134 3.866 5 N -0.697 5.697 6 C 0.559 3.441 7 O -0.518 6.518 8 C -0.134 4.134 9 C -0.076 4.076 10 C -0.110 4.110 11 C 0.014 3.986 12 C -0.148 4.148 13 C -0.119 4.119 14 C -0.104 4.104 15 C -0.219 4.219 16 C -0.026 4.026 17 O -0.534 6.534 18 Si 0.651 3.349 19 S 0.132 5.868 20 C -0.120 4.120 21 C -0.048 4.048 22 C -0.152 4.152 23 C 0.081 3.919 24 H 0.080 0.920 25 O -0.549 6.549 26 C -0.121 4.121 27 H 0.400 0.600 28 H 0.403 0.597 29 H 0.407 0.593 30 H 0.131 0.869 31 H 0.134 0.866 32 H 0.145 0.855 33 H 0.146 0.854 34 H 0.124 0.876 35 H 0.381 0.619 36 H -0.232 1.232 37 H -0.237 1.237 38 H 0.131 0.869 39 H 0.141 0.859 40 H 0.112 0.888 41 H 0.087 0.913 42 H 0.386 0.614 43 H 0.093 0.907 44 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.142 -3.880 -2.972 5.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.414 5.414 2 C 0.312 3.688 3 O -0.399 6.399 4 C 0.044 3.956 5 N -0.352 5.352 6 C 0.347 3.653 7 O -0.393 6.393 8 C -0.138 4.138 9 C -0.095 4.095 10 C -0.129 4.129 11 C 0.012 3.988 12 C -0.265 4.265 13 C -0.149 4.149 14 C -0.134 4.134 15 C -0.336 4.336 16 C -0.139 4.139 17 O -0.340 6.340 18 Si 0.551 3.449 19 S 0.400 5.600 20 C -0.139 4.139 21 C -0.067 4.067 22 C -0.191 4.191 23 C 0.021 3.979 24 H 0.098 0.902 25 O -0.355 6.355 26 C -0.158 4.158 27 H 0.228 0.772 28 H 0.234 0.766 29 H 0.245 0.755 30 H 0.149 0.851 31 H 0.152 0.848 32 H 0.163 0.837 33 H 0.163 0.837 34 H 0.141 0.859 35 H 0.229 0.771 36 H -0.155 1.155 37 H -0.161 1.161 38 H 0.149 0.851 39 H 0.159 0.841 40 H 0.130 0.870 41 H 0.106 0.894 42 H 0.235 0.765 43 H 0.111 0.889 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -1.657 -1.924 -0.956 2.713 hybrid contribution -0.574 -2.123 -1.312 2.561 sum -2.230 -4.047 -2.268 5.147 Atomic orbital electron populations 1.43801 1.07188 1.12974 1.77418 1.20398 0.82699 0.90668 0.75046 1.90767 1.68152 1.32637 1.48296 1.21411 0.95682 0.87522 0.91027 1.45451 1.64236 1.20674 1.04888 1.18275 0.79301 0.85741 0.81964 1.90878 1.42756 1.26241 1.79457 1.19935 1.03312 0.96478 0.94072 1.20962 0.95765 0.92900 0.99852 1.20869 1.00452 1.00237 0.91385 1.18297 0.95798 0.92818 0.91887 1.23078 1.07148 0.99982 0.96298 1.20390 0.99581 0.94262 1.00702 1.20003 1.01176 1.01609 0.90602 1.25093 1.08340 0.99903 1.00285 1.24410 0.85397 1.06503 0.97640 1.86529 1.15321 1.37052 1.95052 0.95004 0.83242 0.86827 0.79838 1.84169 1.54710 1.20607 1.00553 1.20972 0.98877 0.93857 1.00168 1.20946 0.95502 0.99100 0.91172 1.23897 0.92736 1.00522 1.01908 1.22659 0.97197 0.83368 0.94642 0.90194 1.86378 1.35090 1.33137 1.80930 1.23335 0.97150 1.01389 0.93976 0.77233 0.76591 0.75513 0.85147 0.84784 0.83737 0.83650 0.85882 0.77115 1.15540 1.16129 0.85148 0.84109 0.87011 0.89401 0.76539 0.88865 0.86633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.62 8.85 31.22 0.28 0.90 16 2 C 0.53 1.46 6.46 -10.99 -0.07 1.39 16 3 O -0.52 -3.82 16.73 5.56 0.09 -3.72 16 4 C 0.13 0.04 0.90 -132.15 -0.12 -0.08 16 5 N -0.70 0.57 4.42 -48.94 -0.22 0.35 16 6 C 0.56 1.17 7.32 -12.46 -0.09 1.08 16 7 O -0.52 -3.29 15.05 5.28 0.08 -3.21 16 8 C -0.13 -0.08 5.88 -104.90 -0.62 -0.69 16 9 C -0.08 0.14 9.48 -39.59 -0.38 -0.24 16 10 C -0.11 0.16 9.48 -39.59 -0.38 -0.21 16 11 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 12 C -0.15 0.00 6.37 -36.94 -0.24 -0.23 16 13 C -0.12 0.08 9.64 -40.90 -0.39 -0.31 16 14 C -0.10 0.04 10.00 -41.32 -0.41 -0.37 16 15 C -0.22 0.08 5.73 -35.89 -0.21 -0.12 16 16 C -0.03 0.02 2.96 36.01 0.11 0.13 16 17 O -0.53 0.25 12.86 -35.23 -0.45 -0.20 16 18 Si 0.65 -0.74 30.96 -169.99 -5.26 -6.00 16 19 S 0.13 -0.05 19.46 -107.50 -2.09 -2.15 16 20 C -0.12 -0.03 9.54 -39.59 -0.38 -0.41 16 21 C -0.05 -0.05 9.53 -39.59 -0.38 -0.43 16 22 C -0.15 -0.17 6.62 -25.92 -0.17 -0.34 16 23 C 0.08 -0.14 5.28 -25.92 -0.14 -0.27 16 24 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 25 O -0.55 0.96 13.09 -35.23 -0.46 0.50 16 26 C -0.12 0.28 7.18 -25.92 -0.19 0.09 16 27 H 0.40 -1.35 8.66 -40.82 -0.35 -1.71 16 28 H 0.40 -0.52 8.93 -40.82 -0.36 -0.89 16 29 H 0.41 -1.35 6.67 -40.82 -0.27 -1.62 16 30 H 0.13 -0.60 6.40 -52.49 -0.34 -0.94 16 31 H 0.13 -0.47 6.74 -52.49 -0.35 -0.83 16 32 H 0.15 -0.39 6.88 -52.48 -0.36 -0.75 16 33 H 0.15 -0.17 8.06 -52.48 -0.42 -0.59 16 34 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 35 H 0.38 -1.59 8.70 45.56 0.40 -1.19 16 36 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 37 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 38 H 0.13 -0.11 7.26 -52.49 -0.38 -0.49 16 39 H 0.14 0.20 7.64 -52.49 -0.40 -0.20 16 40 H 0.11 0.23 7.41 -51.93 -0.38 -0.15 16 41 H 0.09 0.25 7.55 -51.93 -0.39 -0.14 16 42 H 0.39 -1.78 9.12 45.56 0.42 -1.36 16 43 H 0.09 -0.34 8.09 -51.93 -0.42 -0.76 16 44 H 0.12 -0.34 8.09 -51.93 -0.42 -0.76 16 LS Contribution 386.16 15.07 5.82 5.82 Total: 0.00 -11.72 386.16 -10.96 -22.68 By element: Atomic # 1 Polarization: -9.24 SS G_CDS: -4.08 Total: -13.33 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: -4.66 Total: -1.64 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: 0.06 Total: 1.25 kcal Atomic # 8 Polarization: -5.89 SS G_CDS: -0.74 Total: -6.63 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.26 Total: -6.00 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.09 Total: -2.15 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.72 -10.96 -22.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13308390.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.253 kcal (2) G-P(sol) polarization free energy of solvation -11.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.974 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.931 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds