Wall clock time and date at job start Sun Mar 7 2021 04:59:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21286 * 119.99482 * 2 1 4 4 C 1.50694 * 120.00253 * 179.97438 * 2 1 3 5 5 N 1.46500 * 112.85140 * 323.91035 * 4 2 1 6 6 C 1.34778 * 119.99961 * 293.53133 * 5 4 2 7 7 O 1.21591 * 119.99582 * 354.98266 * 6 5 4 8 8 C 1.47528 * 120.00072 * 174.98034 * 6 5 4 9 9 C 1.39673 * 120.19171 * 0.25840 * 8 6 5 10 10 C 1.37834 * 119.90855 * 180.20769 * 9 8 6 11 11 C 1.38499 * 120.29699 * 359.80997 * 10 9 8 12 12 C 1.50706 * 119.80346 * 179.97438 * 11 10 9 13 13 O 1.42903 * 109.47003 * 119.97802 * 12 11 10 14 14 Si 1.86300 * 109.47049 * 359.97438 * 12 11 10 15 15 C 1.38105 * 120.39295 * 359.95091 * 11 10 9 16 16 C 1.38667 * 120.08369 * 0.02562 * 15 11 10 17 17 O 1.35650 * 120.14716 * 179.97438 * 16 15 11 18 18 C 1.53788 * 113.61378 * 192.71114 * 4 2 1 19 19 C 1.53779 * 87.07980 * 270.79961 * 18 4 2 20 20 H 1.09007 * 113.61248 * 89.12276 * 19 18 4 21 21 O 1.42901 * 113.61686 * 219.93153 * 19 18 4 22 22 C 1.53776 * 87.08552 * 334.56921 * 19 18 4 23 23 H 0.97008 * 119.99647 * 174.96171 * 1 2 3 24 24 H 0.97004 * 120.00725 * 354.95923 * 1 2 3 25 25 H 0.97001 * 119.99578 * 113.53054 * 5 4 2 26 26 H 1.08000 * 120.04481 * 0.02562 * 9 8 6 27 27 H 1.07995 * 119.85036 * 179.78926 * 10 9 8 28 28 H 1.09003 * 109.46802 * 239.97374 * 12 11 10 29 29 H 0.96702 * 114.00118 * 300.00023 * 13 12 11 30 30 H 1.48503 * 109.99802 * 58.68162 * 14 12 11 31 31 H 1.48503 * 109.99973 * 180.02562 * 14 12 11 32 32 H 1.08002 * 119.95834 * 180.02562 * 15 11 10 33 33 H 0.96703 * 114.00074 * 90.00206 * 17 16 15 34 34 H 1.08992 * 113.61360 * 25.35353 * 18 4 2 35 35 H 1.09000 * 113.60848 * 156.16902 * 18 4 2 36 36 H 0.96698 * 114.00452 * 180.02562 * 21 19 18 37 37 H 1.09003 * 113.61340 * 270.88541 * 22 19 18 38 38 H 1.09004 * 113.61754 * 139.98094 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3050 0.0006 5 7 1.4410 -2.3429 0.7963 6 6 1.3418 -2.2059 2.1334 7 8 1.8790 -1.2677 2.6898 8 6 0.5814 -3.1941 2.9218 9 6 -0.0328 -4.2763 2.2873 10 6 -0.7454 -5.1938 3.0290 11 6 -0.8524 -5.0501 4.4024 12 6 -1.6348 -6.0595 5.2025 13 8 -0.7744 -6.6770 6.1619 14 14 -2.3238 -7.3589 4.0590 15 6 -0.2459 -3.9875 5.0431 16 6 0.4754 -3.0553 4.3126 17 8 1.0711 -2.0109 4.9405 18 6 3.5997 -1.1510 0.3106 19 6 3.8134 -0.9694 -1.2014 20 1 3.7368 0.0666 -1.5319 21 8 4.9825 -1.6248 -1.6972 22 6 2.5203 -1.7772 -1.4017 23 1 -0.4850 -0.8369 -0.0738 24 1 -0.4851 0.8368 0.0738 25 1 1.0752 -3.1286 0.3607 26 1 0.0480 -4.3923 1.2166 27 1 -1.2228 -6.0282 2.5370 28 1 -2.4537 -5.5582 5.7184 29 1 -0.0216 -7.1429 5.7729 30 1 -1.2190 -8.0279 3.3260 31 1 -3.0981 -8.3601 4.8358 32 1 -0.3335 -3.8825 6.1144 33 1 1.9762 -2.1903 5.2300 34 1 3.8355 -0.2617 0.8949 35 1 4.0576 -2.0550 0.7121 36 1 5.1225 -1.5139 -2.6475 37 1 2.6835 -2.8528 -1.4696 38 1 1.8848 -1.3932 -2.1998 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13422076.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:22 Heat of formation + Delta-G solvation = -124.399770 kcal Electronic energy + Delta-G solvation = -26040.185063 eV Core-core repulsion = 22043.974864 eV Total energy + Delta-G solvation = -3996.210199 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.114 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.38348 -41.34206 -39.63273 -38.92050 -38.46992 -37.31090 -36.35947 -34.84002 -34.15516 -32.54188 -31.21346 -27.91610 -27.10526 -26.27512 -24.05350 -23.76094 -22.80240 -21.64496 -20.43074 -19.72303 -19.01786 -18.84564 -18.38021 -18.32790 -17.68376 -17.08438 -16.71149 -16.61103 -16.36614 -16.09909 -15.96549 -15.74413 -15.50000 -15.12580 -15.02324 -14.69318 -14.46391 -13.88362 -13.79909 -13.61115 -13.38290 -13.15700 -13.08359 -12.50281 -12.48352 -12.18323 -11.79409 -11.70350 -11.39939 -11.05996 -10.92105 -10.73265 -10.71039 -10.29828 -10.15750 -9.90263 -5.11702 -0.52149 0.00340 1.08870 1.34767 1.44054 1.63146 1.82543 1.84292 2.30540 2.48051 2.98331 3.06896 3.17702 3.21046 3.31504 3.40096 3.50616 3.58832 3.61077 3.77317 3.89405 4.09178 4.14177 4.27557 4.37284 4.48520 4.52163 4.58925 4.74466 4.84710 4.89259 5.00182 5.08193 5.10075 5.20145 5.42748 5.71567 6.17257 6.21892 6.27131 6.61273 6.63143 7.04609 7.17624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.539 3.461 3 O -0.524 6.524 4 C 0.129 3.871 5 N -0.717 5.717 6 C 0.558 3.442 7 O -0.498 6.498 8 C -0.165 4.165 9 C -0.065 4.065 10 C -0.135 4.135 11 C -0.073 4.073 12 C -0.082 4.082 13 O -0.526 6.526 14 Si 0.689 3.311 15 C -0.129 4.129 16 C 0.175 3.825 17 O -0.476 6.476 18 C -0.103 4.103 19 C 0.082 3.918 20 H 0.097 0.903 21 O -0.554 6.554 22 C -0.157 4.157 23 H 0.400 0.600 24 H 0.406 0.594 25 H 0.404 0.596 26 H 0.134 0.866 27 H 0.137 0.863 28 H 0.124 0.876 29 H 0.377 0.623 30 H -0.258 1.258 31 H -0.255 1.255 32 H 0.141 0.859 33 H 0.399 0.601 34 H 0.095 0.905 35 H 0.100 0.900 36 H 0.382 0.618 37 H 0.110 0.890 38 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.285 -5.699 -5.329 8.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.409 5.409 2 C 0.321 3.679 3 O -0.398 6.398 4 C 0.039 3.961 5 N -0.374 5.374 6 C 0.345 3.655 7 O -0.371 6.371 8 C -0.169 4.169 9 C -0.084 4.084 10 C -0.153 4.153 11 C -0.073 4.073 12 C -0.191 4.191 13 O -0.332 6.332 14 Si 0.590 3.410 15 C -0.147 4.147 16 C 0.128 3.872 17 O -0.287 6.287 18 C -0.142 4.142 19 C 0.022 3.978 20 H 0.114 0.886 21 O -0.359 6.359 22 C -0.195 4.195 23 H 0.228 0.772 24 H 0.238 0.762 25 H 0.241 0.759 26 H 0.152 0.848 27 H 0.154 0.846 28 H 0.142 0.858 29 H 0.225 0.775 30 H -0.182 1.182 31 H -0.180 1.180 32 H 0.159 0.841 33 H 0.258 0.742 34 H 0.114 0.886 35 H 0.119 0.881 36 H 0.229 0.771 37 H 0.128 0.872 38 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -4.244 -4.864 -4.173 7.687 hybrid contribution 0.616 -0.788 -0.185 1.017 sum -3.629 -5.652 -4.358 8.006 Atomic orbital electron populations 1.43700 1.06964 1.13213 1.77067 1.19944 0.82830 0.89980 0.75162 1.90788 1.68133 1.32355 1.48523 1.21504 0.93507 0.86866 0.94252 1.45825 1.61325 1.23519 1.06718 1.18141 0.80296 0.85407 0.81624 1.90900 1.44593 1.31615 1.70025 1.20350 1.04410 0.97863 0.94240 1.21137 0.95066 0.92321 0.99874 1.20948 1.00742 1.00316 0.93271 1.20413 0.97021 0.95970 0.93928 1.25177 0.95754 1.00038 0.98156 1.86638 1.41056 1.71715 1.33833 0.94967 0.84696 0.79736 0.81634 1.21364 0.99084 0.92994 1.01304 1.18507 0.93549 0.86305 0.88811 1.84765 1.32599 1.34711 1.76664 1.23208 0.90507 1.04942 0.95536 1.23216 0.83518 0.95641 0.95440 0.88559 1.86537 1.44531 1.76085 1.28770 1.24014 0.98975 1.03109 0.93438 0.77152 0.76248 0.75934 0.84792 0.84573 0.85847 0.77495 1.18242 1.17960 0.84102 0.74207 0.88632 0.88113 0.77077 0.87156 0.89747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.93 8.78 31.22 0.27 1.20 16 2 C 0.54 1.21 6.61 -10.99 -0.07 1.14 16 3 O -0.52 -3.39 16.21 5.55 0.09 -3.30 16 4 C 0.13 -0.01 1.05 -132.16 -0.14 -0.15 16 5 N -0.72 1.41 4.73 -48.95 -0.23 1.18 16 6 C 0.56 0.67 7.42 -12.47 -0.09 0.58 16 7 O -0.50 -2.70 14.20 -16.59 -0.24 -2.94 16 8 C -0.16 0.05 5.89 -104.85 -0.62 -0.57 16 9 C -0.07 0.21 9.53 -39.19 -0.37 -0.16 16 10 C -0.14 0.43 8.65 -39.63 -0.34 0.09 16 11 C -0.07 0.13 5.39 -104.57 -0.56 -0.43 16 12 C -0.08 0.17 2.81 36.01 0.10 0.27 16 13 O -0.53 0.21 12.76 -35.23 -0.45 -0.24 16 14 Si 0.69 -2.04 29.77 -169.99 -5.06 -7.10 16 15 C -0.13 0.04 9.53 -39.47 -0.38 -0.34 16 16 C 0.17 0.16 6.72 -38.70 -0.26 -0.10 16 17 O -0.48 -1.07 11.58 -40.52 -0.47 -1.54 16 18 C -0.10 -0.21 6.14 -25.92 -0.16 -0.37 16 19 C 0.08 0.03 4.82 -25.92 -0.12 -0.10 16 20 H 0.10 0.09 7.63 -51.92 -0.40 -0.30 16 21 O -0.55 -0.25 13.67 -35.23 -0.48 -0.73 16 22 C -0.16 0.37 7.22 -25.92 -0.19 0.19 16 23 H 0.40 -1.57 8.47 -40.82 -0.35 -1.92 16 24 H 0.41 -0.60 8.93 -40.82 -0.36 -0.97 16 25 H 0.40 -2.18 6.75 -40.82 -0.28 -2.46 16 26 H 0.13 -0.89 6.41 -52.49 -0.34 -1.23 16 27 H 0.14 -0.72 4.85 -52.49 -0.25 -0.97 16 28 H 0.12 -0.31 7.96 -51.93 -0.41 -0.73 16 29 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 30 H -0.26 0.33 7.11 56.52 0.40 0.74 16 31 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 32 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.40 -0.47 9.06 45.56 0.41 -0.06 16 34 H 0.10 0.45 7.63 -51.93 -0.40 0.06 16 35 H 0.10 0.21 8.14 -51.93 -0.42 -0.21 16 36 H 0.38 -1.46 9.12 45.56 0.42 -1.05 16 37 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.08 -0.30 8.10 -51.93 -0.42 -0.72 16 LS Contribution 325.65 15.07 4.91 4.91 Total: 0.00 -12.98 325.65 -7.31 -20.29 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -2.44 Total: -11.77 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -3.21 Total: 0.04 kcal Atomic # 7 Polarization: 2.34 SS G_CDS: 0.04 Total: 2.38 kcal Atomic # 8 Polarization: -7.19 SS G_CDS: -1.55 Total: -8.74 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.06 Total: -7.10 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -12.98 -7.31 -20.29 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13422076.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.113 kcal (2) G-P(sol) polarization free energy of solvation -12.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.092 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds