Wall clock time and date at job start Sun Mar 7 2021 04:59:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21286 * 119.99482 * 2 1 4 4 C 1.50694 * 120.00253 * 179.97438 * 2 1 3 5 5 N 1.46500 * 112.85140 * 323.91035 * 4 2 1 6 6 C 1.34778 * 119.99961 * 293.53133 * 5 4 2 7 7 O 1.21591 * 119.99582 * 354.98266 * 6 5 4 8 8 C 1.47528 * 120.00072 * 174.98034 * 6 5 4 9 9 C 1.39673 * 120.19171 * 0.25840 * 8 6 5 10 10 C 1.37834 * 119.90855 * 180.20769 * 9 8 6 11 11 C 1.38499 * 120.29699 * 359.80997 * 10 9 8 12 12 C 1.50706 * 119.80346 * 179.97438 * 11 10 9 13 13 O 1.42903 * 109.47003 * 119.97802 * 12 11 10 14 14 Si 1.86300 * 109.47049 * 359.97438 * 12 11 10 15 15 C 1.38105 * 120.39295 * 359.95091 * 11 10 9 16 16 C 1.38667 * 120.08369 * 0.02562 * 15 11 10 17 17 O 1.35650 * 120.14716 * 179.97438 * 16 15 11 18 18 C 1.53788 * 113.61378 * 192.71114 * 4 2 1 19 19 C 1.53779 * 87.07980 * 270.79961 * 18 4 2 20 20 H 1.09007 * 113.61248 * 89.12276 * 19 18 4 21 21 O 1.42901 * 113.61686 * 219.93153 * 19 18 4 22 22 C 1.53776 * 87.08552 * 334.56921 * 19 18 4 23 23 H 0.97008 * 119.99647 * 174.96171 * 1 2 3 24 24 H 0.97004 * 120.00725 * 354.95923 * 1 2 3 25 25 H 0.97001 * 119.99578 * 113.53054 * 5 4 2 26 26 H 1.08000 * 120.04481 * 0.02562 * 9 8 6 27 27 H 1.07995 * 119.85036 * 179.78926 * 10 9 8 28 28 H 1.09003 * 109.46802 * 239.97374 * 12 11 10 29 29 H 0.96702 * 114.00118 * 300.00023 * 13 12 11 30 30 H 1.48503 * 109.99802 * 58.68162 * 14 12 11 31 31 H 1.48503 * 109.99973 * 180.02562 * 14 12 11 32 32 H 1.08002 * 119.95834 * 180.02562 * 15 11 10 33 33 H 0.96703 * 114.00074 * 90.00206 * 17 16 15 34 34 H 1.08992 * 113.61360 * 25.35353 * 18 4 2 35 35 H 1.09000 * 113.60848 * 156.16902 * 18 4 2 36 36 H 0.96698 * 114.00452 * 180.02562 * 21 19 18 37 37 H 1.09003 * 113.61340 * 270.88541 * 22 19 18 38 38 H 1.09004 * 113.61754 * 139.98094 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3050 0.0006 5 7 1.4410 -2.3429 0.7963 6 6 1.3418 -2.2059 2.1334 7 8 1.8790 -1.2677 2.6898 8 6 0.5814 -3.1941 2.9218 9 6 -0.0328 -4.2763 2.2873 10 6 -0.7454 -5.1938 3.0290 11 6 -0.8524 -5.0501 4.4024 12 6 -1.6348 -6.0595 5.2025 13 8 -0.7744 -6.6770 6.1619 14 14 -2.3238 -7.3589 4.0590 15 6 -0.2459 -3.9875 5.0431 16 6 0.4754 -3.0553 4.3126 17 8 1.0711 -2.0109 4.9405 18 6 3.5997 -1.1510 0.3106 19 6 3.8134 -0.9694 -1.2014 20 1 3.7368 0.0666 -1.5319 21 8 4.9825 -1.6248 -1.6972 22 6 2.5203 -1.7772 -1.4017 23 1 -0.4850 -0.8369 -0.0738 24 1 -0.4851 0.8368 0.0738 25 1 1.0752 -3.1286 0.3607 26 1 0.0480 -4.3923 1.2166 27 1 -1.2228 -6.0282 2.5370 28 1 -2.4537 -5.5582 5.7184 29 1 -0.0216 -7.1429 5.7729 30 1 -1.2190 -8.0279 3.3260 31 1 -3.0981 -8.3601 4.8358 32 1 -0.3335 -3.8825 6.1144 33 1 1.9762 -2.1903 5.2300 34 1 3.8355 -0.2617 0.8949 35 1 4.0576 -2.0550 0.7121 36 1 5.1225 -1.5139 -2.6475 37 1 2.6835 -2.8528 -1.4696 38 1 1.8848 -1.3932 -2.1998 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13422076.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:22 Heat of formation + Delta-G solvation = -137.926859 kcal Electronic energy + Delta-G solvation = -26040.771642 eV Core-core repulsion = 22043.974864 eV Total energy + Delta-G solvation = -3996.796778 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.114 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.42199 -41.29973 -39.69281 -38.99846 -38.46213 -37.24556 -36.41119 -34.89936 -34.20035 -32.43954 -31.10711 -27.84700 -27.08885 -26.27017 -23.90874 -23.75644 -22.80496 -21.61834 -20.49136 -19.69084 -19.02098 -18.79567 -18.37733 -18.26161 -17.72712 -17.06809 -16.68461 -16.55000 -16.30636 -16.03880 -16.00907 -15.78987 -15.53346 -15.17832 -14.88640 -14.69386 -14.46989 -13.77895 -13.72528 -13.55854 -13.36117 -13.18224 -12.97060 -12.60038 -12.38029 -12.17706 -11.79854 -11.62636 -11.51663 -11.03954 -10.93044 -10.79985 -10.65216 -10.35418 -10.04018 -9.79429 -4.88591 -0.43001 0.15757 1.25356 1.29284 1.63728 1.64995 1.84061 2.02286 2.30430 2.56293 3.08994 3.11954 3.23326 3.36462 3.43564 3.48728 3.60063 3.67187 3.75803 3.85611 4.08342 4.16729 4.28034 4.42992 4.55294 4.61894 4.64485 4.76044 4.77682 4.85318 4.92371 5.03176 5.14255 5.21239 5.25606 5.60237 5.71367 6.24717 6.38145 6.46893 6.68043 6.83890 7.07766 7.14683 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.829 5.829 2 C 0.531 3.469 3 O -0.577 6.577 4 C 0.133 3.867 5 N -0.694 5.694 6 C 0.557 3.443 7 O -0.550 6.550 8 C -0.177 4.177 9 C -0.048 4.048 10 C -0.130 4.130 11 C -0.069 4.069 12 C -0.097 4.097 13 O -0.549 6.549 14 Si 0.784 3.216 15 C -0.142 4.142 16 C 0.151 3.849 17 O -0.501 6.501 18 C -0.116 4.116 19 C 0.080 3.920 20 H 0.083 0.917 21 O -0.569 6.569 22 C -0.129 4.129 23 H 0.417 0.583 24 H 0.409 0.591 25 H 0.425 0.575 26 H 0.178 0.822 27 H 0.167 0.833 28 H 0.124 0.876 29 H 0.388 0.612 30 H -0.268 1.268 31 H -0.310 1.310 32 H 0.130 0.870 33 H 0.406 0.594 34 H 0.055 0.945 35 H 0.098 0.902 36 H 0.399 0.601 37 H 0.136 0.864 38 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.682 -7.989 -7.820 12.540 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.314 3.686 3 O -0.455 6.455 4 C 0.043 3.957 5 N -0.352 5.352 6 C 0.346 3.654 7 O -0.427 6.427 8 C -0.181 4.181 9 C -0.066 4.066 10 C -0.147 4.147 11 C -0.069 4.069 12 C -0.204 4.204 13 O -0.358 6.358 14 Si 0.687 3.313 15 C -0.161 4.161 16 C 0.105 3.895 17 O -0.313 6.313 18 C -0.155 4.155 19 C 0.020 3.980 20 H 0.101 0.899 21 O -0.378 6.378 22 C -0.167 4.167 23 H 0.248 0.752 24 H 0.240 0.760 25 H 0.266 0.734 26 H 0.195 0.805 27 H 0.183 0.817 28 H 0.142 0.858 29 H 0.238 0.762 30 H -0.194 1.194 31 H -0.239 1.239 32 H 0.148 0.852 33 H 0.265 0.735 34 H 0.074 0.926 35 H 0.116 0.884 36 H 0.250 0.750 37 H 0.154 0.846 38 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -5.675 -7.192 -6.713 11.358 hybrid contribution 1.033 -0.122 0.676 1.241 sum -4.642 -7.314 -6.037 10.559 Atomic orbital electron populations 1.43598 1.06037 1.14318 1.75307 1.20374 0.83676 0.90124 0.74448 1.90762 1.69332 1.34293 1.51150 1.21318 0.91879 0.86585 0.95955 1.45567 1.60319 1.23655 1.05612 1.18445 0.79663 0.84926 0.82392 1.90890 1.46804 1.33824 1.71180 1.20327 1.05387 0.98787 0.93558 1.21556 0.92891 0.90288 1.01853 1.21265 1.00088 1.00879 0.92451 1.20509 0.96440 0.95145 0.94835 1.25522 0.95626 1.00778 0.98512 1.86607 1.41882 1.72096 1.35181 0.93985 0.81373 0.76466 0.79429 1.21314 1.00033 0.93805 1.00937 1.18783 0.94409 0.86580 0.89728 1.84724 1.33375 1.36099 1.77149 1.23205 0.92754 1.02973 0.96576 1.23102 0.85080 0.95776 0.94021 0.89905 1.86488 1.44737 1.75974 1.30592 1.23935 0.96743 1.04066 0.91984 0.75223 0.75958 0.73355 0.80513 0.81655 0.85829 0.76231 1.19423 1.23906 0.85232 0.73463 0.92647 0.88378 0.74980 0.84623 0.87584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.19 8.78 -173.53 -1.52 0.66 16 2 C 0.53 2.76 6.61 87.66 0.58 3.34 16 3 O -0.58 -8.89 16.21 -3.05 -0.05 -8.94 16 4 C 0.13 -0.05 1.05 3.39 0.00 -0.05 16 5 N -0.69 3.73 4.73 -427.05 -2.02 1.71 16 6 C 0.56 1.45 7.42 86.69 0.64 2.10 16 7 O -0.55 -7.26 14.20 16.91 0.24 -7.02 16 8 C -0.18 0.19 5.89 -20.01 -0.12 0.07 16 9 C -0.05 0.46 9.53 22.52 0.21 0.67 16 10 C -0.13 1.21 8.65 22.24 0.19 1.40 16 11 C -0.07 0.31 5.39 -19.83 -0.11 0.20 16 12 C -0.10 0.45 2.81 71.24 0.20 0.65 16 13 O -0.55 0.31 12.76 -148.98 -1.90 -1.59 16 14 Si 0.78 -5.91 29.77 68.60 2.04 -3.87 16 15 C -0.14 -0.06 9.53 22.34 0.21 0.15 16 16 C 0.15 0.48 6.72 22.84 0.15 0.63 16 17 O -0.50 -3.73 11.58 -68.73 -0.80 -4.52 16 18 C -0.12 -0.68 6.14 31.12 0.19 -0.49 16 19 C 0.08 0.08 4.82 31.12 0.15 0.23 16 20 H 0.08 0.29 7.63 -2.38 -0.02 0.27 16 21 O -0.57 -0.36 13.67 -148.98 -2.04 -2.40 16 22 C -0.13 0.89 7.22 31.12 0.22 1.11 16 23 H 0.42 -4.05 8.47 -92.70 -0.79 -4.84 16 24 H 0.41 -1.20 8.93 -92.70 -0.83 -2.03 16 25 H 0.43 -6.18 6.75 -92.71 -0.63 -6.81 16 26 H 0.18 -3.31 6.41 -2.91 -0.02 -3.33 16 27 H 0.17 -2.49 4.85 -2.91 -0.01 -2.51 16 28 H 0.12 -0.62 7.96 -2.39 -0.02 -0.64 16 29 H 0.39 -2.63 8.70 -74.06 -0.64 -3.27 16 30 H -0.27 1.49 7.11 99.48 0.71 2.20 16 31 H -0.31 -0.60 7.11 99.48 0.71 0.10 16 32 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 33 H 0.41 0.52 9.06 -74.06 -0.67 -0.15 16 34 H 0.05 0.76 7.63 -2.39 -0.02 0.74 16 35 H 0.10 0.56 8.14 -2.39 -0.02 0.54 16 36 H 0.40 -3.37 9.12 -74.06 -0.68 -4.04 16 37 H 0.14 -1.55 8.14 -2.39 -0.02 -1.57 16 38 H 0.11 -1.09 8.10 -2.38 -0.02 -1.11 16 Total: 0.00 -35.69 325.65 -6.49 -42.18 By element: Atomic # 1 Polarization: -23.23 SS G_CDS: -2.99 Total: -26.22 kcal Atomic # 6 Polarization: 7.47 SS G_CDS: 2.54 Total: 10.01 kcal Atomic # 7 Polarization: 5.92 SS G_CDS: -3.55 Total: 2.37 kcal Atomic # 8 Polarization: -19.92 SS G_CDS: -4.54 Total: -24.47 kcal Atomic # 14 Polarization: -5.91 SS G_CDS: 2.04 Total: -3.87 kcal Total: -35.69 -6.49 -42.18 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13422076.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.747 kcal (2) G-P(sol) polarization free energy of solvation -35.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.180 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds