Wall clock time and date at job start Sun Mar 7 2021 04:59:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37790 * 119.84614 * 2 1 4 4 C 1.39705 * 119.90179 * 180.23376 * 3 2 1 5 5 C 1.47542 * 120.18693 * 179.78881 * 4 3 2 6 6 O 1.21591 * 120.00105 * 179.71916 * 5 4 3 7 7 N 1.34777 * 120.00161 * 359.72238 * 5 4 3 8 8 C 1.46500 * 120.00110 * 175.22269 * 7 5 4 9 9 C 1.50709 * 112.84745 * 305.60855 * 8 7 5 10 10 N 1.34773 * 120.00165 * 313.97526 * 9 8 7 11 11 O 1.21281 * 119.99657 * 133.97148 * 9 8 7 12 12 C 1.53779 * 113.61495 * 174.41548 * 8 7 5 13 13 C 1.53779 * 87.08277 * 219.93073 * 12 8 7 14 14 H 1.09001 * 113.61639 * 270.88921 * 13 12 8 15 15 O 1.42890 * 113.61528 * 140.06161 * 13 12 8 16 16 C 1.53780 * 113.69462 * 76.87800 * 8 7 5 17 17 C 1.40137 * 119.62366 * 359.51116 * 4 3 2 18 18 O 1.35647 * 120.15211 * 180.22952 * 17 4 3 19 19 C 1.38705 * 119.69294 * 0.25772 * 17 4 3 20 20 C 1.50704 * 119.95285 * 180.02562 * 19 17 4 21 21 O 1.42903 * 109.47242 * 74.99908 * 20 19 17 22 22 Si 1.86302 * 109.47037 * 194.99474 * 20 19 17 23 23 C 1.38059 * 120.09090 * 359.97438 * 19 17 4 24 24 H 1.09002 * 109.47261 * 270.23126 * 1 2 3 25 25 H 1.08996 * 109.47181 * 30.23684 * 1 2 3 26 26 H 1.09002 * 109.47156 * 150.23634 * 1 2 3 27 27 H 1.07994 * 120.05196 * 0.02562 * 3 2 1 28 28 H 0.96999 * 119.99819 * 355.21823 * 7 5 4 29 29 H 0.97008 * 120.00121 * 4.99277 * 10 9 8 30 30 H 0.96993 * 120.00373 * 184.99810 * 10 9 8 31 31 H 1.09007 * 113.61036 * 105.38494 * 12 8 7 32 32 H 1.09000 * 113.61482 * 334.48028 * 12 8 7 33 33 H 0.96707 * 114.00600 * 181.52827 * 15 13 12 34 34 H 1.08996 * 113.61424 * 25.44332 * 16 8 7 35 35 H 1.09003 * 113.61325 * 254.53941 * 16 8 7 36 36 H 0.96706 * 113.99979 * 90.00698 * 18 17 4 37 37 H 1.08995 * 109.47330 * 314.99519 * 20 19 17 38 38 H 0.96703 * 114.00062 * 180.02562 * 21 20 19 39 39 H 1.48500 * 110.00389 * 178.67883 * 22 20 19 40 40 H 1.48496 * 110.00097 * 299.99987 * 22 20 19 41 41 H 1.07996 * 119.80862 * 180.02562 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0049 5 6 4.3304 2.4726 -0.0097 6 8 5.5463 2.4698 -0.0088 7 7 3.6592 3.6413 -0.0149 8 6 4.3907 4.9066 0.0861 9 6 5.2988 4.9633 1.2876 10 7 4.8462 4.5669 2.4936 11 8 6.4368 5.3655 1.1691 12 6 3.4976 6.1487 -0.0702 13 6 4.6382 6.7681 -0.8949 14 1 5.3627 7.3180 -0.2941 15 8 4.1869 7.5056 -2.0325 16 6 5.0752 5.3309 -1.2240 17 6 4.2837 -0.0210 0.0005 18 8 5.6401 -0.0322 0.0005 19 6 3.5771 -1.2145 0.0054 20 6 4.3174 -2.5272 0.0118 21 8 4.8541 -2.7650 1.3147 22 14 3.1449 -3.9036 -0.4373 23 6 2.1966 -1.2016 0.0053 24 1 -0.3634 0.0041 1.0277 25 1 -0.3633 0.8878 -0.5175 26 1 -0.3633 -0.8921 -0.5102 27 1 1.6511 2.1294 0.0004 28 1 2.6918 3.6447 -0.0856 29 1 3.9615 4.1777 2.5757 30 1 5.4051 4.6709 3.2795 31 1 3.3050 6.6688 0.8682 32 1 2.5914 5.9650 -0.6473 33 1 4.9006 7.8781 -2.5683 34 1 4.6004 4.9237 -2.1165 35 1 6.1562 5.1908 -1.2170 36 1 6.0335 -0.0315 0.8839 37 1 5.1293 -2.4901 -0.7144 38 1 5.3452 -3.5944 1.3925 39 1 3.8697 -5.1994 -0.4656 40 1 2.0333 -3.9648 0.5454 41 1 1.6510 -2.1336 0.0095 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13422088.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:25 Heat of formation + Delta-G solvation = -128.422000 kcal Electronic energy + Delta-G solvation = -28361.792923 eV Core-core repulsion = 24209.870688 eV Total energy + Delta-G solvation = -4151.922235 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.34783 -41.38019 -39.53918 -38.89999 -38.05407 -37.70966 -36.33398 -34.74116 -34.21224 -33.24918 -32.51376 -27.72972 -27.03689 -26.93661 -26.70562 -24.82527 -22.98462 -21.92234 -21.32275 -20.42665 -19.58588 -19.05622 -18.63539 -18.31755 -18.28253 -17.81959 -17.35162 -16.71589 -16.64159 -16.08471 -15.86264 -15.76443 -15.41902 -15.37074 -15.09584 -15.02606 -14.64688 -14.59178 -14.14773 -13.87854 -13.73923 -13.58008 -13.28581 -13.25065 -13.13376 -12.71407 -12.54004 -12.48913 -11.87148 -11.79681 -11.70361 -11.24981 -11.04152 -10.76106 -10.69943 -10.50850 -10.25750 -10.10554 -9.56118 -5.06227 -0.38193 0.01208 1.16326 1.38060 1.48215 1.67820 1.82498 1.94626 2.32854 2.50080 3.12466 3.13819 3.15813 3.20010 3.38228 3.46819 3.54436 3.69895 3.70532 3.78453 3.99743 4.02869 4.10783 4.25000 4.38015 4.47370 4.51832 4.53514 4.54267 4.67766 4.75101 4.87021 4.92372 4.93597 5.06184 5.13838 5.23178 5.27491 5.52655 5.74980 6.20589 6.31901 6.33965 6.62684 6.72984 7.10663 7.21463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.068 4.068 4 C -0.165 4.165 5 C 0.558 3.442 6 O -0.497 6.497 7 N -0.716 5.716 8 C 0.131 3.869 9 C 0.544 3.456 10 N -0.848 5.848 11 O -0.521 6.521 12 C -0.118 4.118 13 C 0.082 3.918 14 H 0.093 0.907 15 O -0.556 6.556 16 C -0.152 4.152 17 C 0.192 3.808 18 O -0.473 6.473 19 C -0.104 4.104 20 C -0.073 4.073 21 O -0.537 6.537 22 Si 0.689 3.311 23 C -0.074 4.074 24 H 0.074 0.926 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.132 0.868 28 H 0.404 0.596 29 H 0.400 0.600 30 H 0.405 0.595 31 H 0.088 0.912 32 H 0.111 0.889 33 H 0.385 0.615 34 H 0.101 0.899 35 H 0.092 0.908 36 H 0.399 0.601 37 H 0.083 0.917 38 H 0.382 0.618 39 H -0.258 1.258 40 H -0.253 1.253 41 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.390 -1.399 0.184 7.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.345 3.655 6 O -0.371 6.371 7 N -0.373 5.373 8 C 0.040 3.960 9 C 0.325 3.675 10 N -0.412 5.412 11 O -0.395 6.395 12 C -0.156 4.156 13 C 0.022 3.978 14 H 0.111 0.889 15 O -0.362 6.362 16 C -0.191 4.191 17 C 0.145 3.855 18 O -0.284 6.284 19 C -0.104 4.104 20 C -0.182 4.182 21 O -0.345 6.345 22 Si 0.590 3.410 23 C -0.092 4.092 24 H 0.093 0.907 25 H 0.091 0.909 26 H 0.092 0.908 27 H 0.150 0.850 28 H 0.242 0.758 29 H 0.228 0.772 30 H 0.237 0.763 31 H 0.107 0.893 32 H 0.129 0.871 33 H 0.233 0.767 34 H 0.120 0.880 35 H 0.111 0.889 36 H 0.258 0.742 37 H 0.101 0.899 38 H 0.230 0.770 39 H -0.183 1.183 40 H -0.178 1.178 41 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -7.043 -1.460 -0.056 7.193 hybrid contribution 0.823 -0.460 1.461 1.739 sum -6.220 -1.920 1.405 6.659 Atomic orbital electron populations 1.20837 0.89906 1.03633 1.02960 1.19773 0.96813 0.92148 1.00932 1.21113 0.91995 0.98327 0.97191 1.20260 0.93900 0.93021 1.09728 1.18146 0.87490 0.83184 0.76675 1.90911 1.12756 1.86876 1.46508 1.45839 1.10427 1.04144 1.76893 1.21503 0.94478 0.84512 0.95468 1.19787 0.87105 0.76619 0.83953 1.43700 1.21832 1.65964 1.09665 1.90774 1.17815 1.46035 1.84827 1.23354 0.98405 0.92573 1.01255 1.23117 0.95765 0.90685 0.88195 0.88927 1.86460 1.37550 1.72266 1.39962 1.23958 1.03381 0.96063 0.95739 1.18194 0.83970 0.89685 0.93665 1.84678 1.14187 1.95870 1.33654 1.19556 0.93357 0.93543 1.03981 1.24714 1.03933 1.01418 0.88173 1.86534 1.73614 1.44722 1.29629 0.94900 0.80078 0.76591 0.89426 1.21136 0.92759 0.98624 0.96672 0.90701 0.90907 0.90848 0.85024 0.75838 0.77183 0.76323 0.89338 0.87063 0.76658 0.88042 0.88895 0.74227 0.89941 0.76960 1.18319 1.17790 0.84598 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.45 10.00 36.01 0.36 0.81 16 2 C -0.10 0.16 5.87 -104.67 -0.61 -0.46 16 3 C -0.07 0.12 9.18 -39.20 -0.36 -0.24 16 4 C -0.17 -0.18 5.89 -104.84 -0.62 -0.79 16 5 C 0.56 1.25 7.44 -12.47 -0.09 1.15 16 6 O -0.50 -3.18 14.17 -16.59 -0.24 -3.42 16 7 N -0.72 0.73 5.00 -48.95 -0.24 0.49 16 8 C 0.13 0.06 1.03 -132.16 -0.14 -0.07 16 9 C 0.54 1.50 5.71 -10.98 -0.06 1.44 16 10 N -0.85 0.55 8.85 31.22 0.28 0.82 16 11 O -0.52 -3.65 16.47 5.56 0.09 -3.56 16 12 C -0.12 0.17 7.18 -25.92 -0.19 -0.02 16 13 C 0.08 0.04 4.85 -25.92 -0.13 -0.09 16 14 H 0.09 0.09 7.96 -51.93 -0.41 -0.33 16 15 O -0.56 -0.31 13.67 -35.23 -0.48 -0.79 16 16 C -0.15 -0.27 6.91 -25.92 -0.18 -0.45 16 17 C 0.19 0.45 6.69 -38.70 -0.26 0.19 16 18 O -0.47 -1.67 10.91 -40.52 -0.44 -2.12 16 19 C -0.10 -0.11 5.30 -104.51 -0.55 -0.66 16 20 C -0.07 0.00 2.37 36.01 0.09 0.08 16 21 O -0.54 -0.34 12.86 -35.23 -0.45 -0.79 16 22 Si 0.69 -0.98 30.19 -169.99 -5.13 -6.11 16 23 C -0.07 0.04 8.30 -39.53 -0.33 -0.29 16 24 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 25 H 0.07 -0.35 8.08 -51.93 -0.42 -0.77 16 26 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 27 H 0.13 -0.65 6.42 -52.49 -0.34 -0.99 16 28 H 0.40 -1.71 6.70 -40.82 -0.27 -1.98 16 29 H 0.40 -1.27 8.63 -40.82 -0.35 -1.62 16 30 H 0.41 -0.51 8.93 -40.82 -0.36 -0.88 16 31 H 0.09 -0.22 8.09 -51.93 -0.42 -0.64 16 32 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.39 -1.14 9.12 45.56 0.42 -0.73 16 34 H 0.10 0.15 8.14 -51.93 -0.42 -0.27 16 35 H 0.09 0.40 7.47 -51.93 -0.39 0.01 16 36 H 0.40 0.52 9.06 45.56 0.41 0.94 16 37 H 0.08 -0.01 7.83 -51.93 -0.41 -0.42 16 38 H 0.38 -1.16 8.74 45.56 0.40 -0.76 16 39 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 40 H -0.25 -0.19 6.74 56.52 0.38 0.20 16 41 H 0.14 -0.25 4.87 -52.49 -0.26 -0.51 16 LS Contribution 347.11 15.07 5.23 5.23 Total: 0.00 -12.58 347.11 -7.77 -20.35 By element: Atomic # 1 Polarization: -7.40 SS G_CDS: -3.31 Total: -10.71 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -3.07 Total: 0.60 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: 0.03 Total: 1.31 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: -1.52 Total: -10.67 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.13 Total: -6.11 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -12.58 -7.77 -20.35 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13422088.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.071 kcal (2) G-P(sol) polarization free energy of solvation -12.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.351 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds