Wall clock time and date at job start Sun Mar 7 2021 04:59:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46907 * 110.99901 * 2 1 4 4 C 1.39046 * 111.00645 * 236.04404 * 2 1 3 5 5 C 1.39200 * 119.93237 * 239.73126 * 4 2 1 6 6 C 1.50693 * 119.96220 * 359.97438 * 5 4 2 7 7 O 1.42900 * 109.47490 * 284.99968 * 6 5 4 8 8 Si 1.86306 * 109.46810 * 165.00134 * 6 5 4 9 9 C 1.37628 * 120.06680 * 179.71768 * 5 4 2 10 10 C 1.39780 * 119.93094 * 0.54923 * 9 5 4 11 11 C 1.47514 * 120.06729 * 179.74490 * 10 9 5 12 12 O 1.21603 * 120.00312 * 359.97438 * 11 10 9 13 13 N 1.34778 * 120.00104 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00273 * 175.05785 * 13 11 10 15 15 C 1.50700 * 112.85250 * 67.38977 * 14 13 11 16 16 N 1.34782 * 119.99525 * 36.12099 * 15 14 13 17 17 O 1.21278 * 120.00336 * 216.11852 * 15 14 13 18 18 C 1.53787 * 113.61332 * 296.19538 * 14 13 11 19 19 C 1.53779 * 87.08212 * 270.88236 * 18 14 13 20 20 H 1.08998 * 113.61736 * 220.01650 * 19 18 14 21 21 O 1.42906 * 113.61062 * 89.19976 * 19 18 14 22 22 C 1.53783 * 87.08348 * 334.56965 * 19 18 14 23 23 C 1.39814 * 119.86357 * 359.72236 * 10 9 5 24 24 C 1.37585 * 119.92839 * 359.97438 * 23 10 9 25 25 H 1.09002 * 109.46899 * 183.95490 * 1 2 3 26 26 H 1.08996 * 109.47017 * 63.95935 * 1 2 3 27 27 H 1.08996 * 109.47124 * 303.95898 * 1 2 3 28 28 H 1.08991 * 109.47126 * 56.04461 * 3 2 1 29 29 H 1.09003 * 109.46990 * 176.04857 * 3 2 1 30 30 H 1.09000 * 109.46826 * 296.04332 * 3 2 1 31 31 H 1.08998 * 109.47487 * 45.00744 * 6 5 4 32 32 H 0.96698 * 114.00235 * 179.97438 * 7 6 5 33 33 H 1.48504 * 109.99909 * 60.00089 * 8 6 5 34 34 H 1.48500 * 109.99785 * 181.31728 * 8 6 5 35 35 H 1.07999 * 120.03654 * 180.25153 * 9 5 4 36 36 H 0.97001 * 119.99918 * 355.06442 * 13 11 10 37 37 H 0.97006 * 119.99708 * 355.00429 * 16 15 14 38 38 H 0.96998 * 119.99582 * 175.00848 * 16 15 14 39 39 H 1.08995 * 113.61460 * 25.43248 * 18 14 13 40 40 H 1.08998 * 113.61432 * 156.25158 * 18 14 13 41 41 H 0.96706 * 113.99997 * 180.02562 * 21 19 18 42 42 H 1.08997 * 113.60976 * 270.88173 * 22 19 18 43 43 H 1.08997 * 113.61610 * 139.97639 * 22 19 18 44 44 H 1.07998 * 120.03547 * 180.02562 * 23 10 9 45 45 H 1.08002 * 119.96678 * 180.02562 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9674 -0.7250 -1.0767 5 6 2.7840 -1.8297 -0.8518 6 6 3.1270 -2.2375 0.5578 7 8 4.0943 -1.3325 1.0936 8 14 3.8281 -3.9636 0.5516 9 6 3.2742 -2.5527 -1.9153 10 6 2.9605 -2.1701 -3.2226 11 6 3.4889 -2.9396 -4.3648 12 8 4.1984 -3.9077 -4.1697 13 7 3.1852 -2.5697 -5.6248 14 6 3.7957 -3.2661 -6.7600 15 6 3.3343 -4.6951 -6.8868 16 7 2.0612 -5.0212 -6.5877 17 8 4.1086 -5.5516 -7.2579 18 6 5.3231 -3.1030 -6.8336 19 6 5.0691 -1.8416 -7.6755 20 1 5.7633 -1.7249 -8.5078 21 8 4.9319 -0.6514 -6.8964 22 6 3.7267 -2.4753 -8.0771 23 6 2.1447 -1.0567 -3.4453 24 6 1.6527 -0.3417 -2.3778 25 1 -0.3633 -1.0252 0.0709 26 1 -0.3633 0.4511 -0.9233 27 1 -0.3633 0.5740 0.8523 28 1 1.5898 1.9164 0.8523 29 1 3.0828 1.3433 0.0708 30 1 1.7043 1.8723 -0.9233 31 1 2.2271 -2.2132 1.1723 32 1 4.3621 -1.5345 2.0006 33 1 5.0556 -4.0102 -0.2829 34 1 4.1409 -4.3897 1.9393 35 1 3.9044 -3.4121 -1.7401 36 1 2.5625 -1.8423 -5.7800 37 1 1.4621 -4.3515 -6.2222 38 1 1.7442 -5.9255 -6.7380 39 1 5.7873 -2.8980 -5.8689 40 1 5.8216 -3.9024 -7.3818 41 1 4.7715 0.1454 -7.4204 42 1 3.7887 -3.1023 -8.9666 43 1 2.9022 -1.7635 -8.1164 44 1 1.9003 -0.7588 -4.4542 45 1 1.0221 0.5182 -2.5491 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13422196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:28 Heat of formation + Delta-G solvation = -63.467430 kcal Electronic energy + Delta-G solvation = -30470.842737 eV Core-core repulsion = 26263.918186 eV Total energy + Delta-G solvation = -4206.924550 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.156 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.30437 -41.32770 -39.76196 -39.10037 -37.77348 -37.23138 -36.15876 -34.70989 -34.01132 -32.70878 -31.21609 -28.61852 -27.33747 -27.03527 -26.87941 -25.73746 -23.41920 -22.78530 -22.29494 -21.27887 -20.29623 -19.09676 -19.00473 -18.39138 -18.01003 -17.88476 -17.73150 -17.15693 -16.55511 -16.24864 -16.11086 -15.99295 -15.69533 -15.61545 -15.29458 -15.06395 -15.00972 -14.75499 -14.55155 -14.03263 -13.90182 -13.68072 -13.64497 -13.47978 -13.32929 -13.07295 -13.05090 -12.75099 -12.68687 -12.43671 -12.07038 -11.84880 -11.66674 -11.26629 -11.14757 -10.91432 -10.61555 -10.30922 -10.08702 -10.03745 -9.73754 -9.57778 -4.87807 -0.32693 0.17623 1.36773 1.51125 1.67416 1.70389 1.93975 2.06504 2.50832 2.68077 2.75895 2.91574 3.23266 3.32924 3.38928 3.55871 3.65683 3.74819 3.76328 3.89265 4.03519 4.09815 4.22296 4.25481 4.28273 4.43155 4.45101 4.46593 4.50390 4.50830 4.65144 4.74715 4.79043 4.81561 4.84365 4.94846 5.04652 5.06978 5.15374 5.27164 5.32282 5.57694 5.78111 5.83822 6.25210 6.30027 6.39582 6.53315 6.58106 7.13271 7.30890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.509 5.509 3 C 0.031 3.969 4 C 0.144 3.856 5 C -0.059 4.059 6 C -0.052 4.052 7 O -0.528 6.528 8 Si 0.665 3.335 9 C -0.050 4.050 10 C -0.134 4.134 11 C 0.563 3.437 12 O -0.517 6.517 13 N -0.699 5.699 14 C 0.133 3.867 15 C 0.533 3.467 16 N -0.849 5.849 17 O -0.530 6.530 18 C -0.115 4.115 19 C 0.082 3.918 20 H 0.081 0.919 21 O -0.544 6.544 22 C -0.156 4.156 23 C -0.066 4.066 24 C -0.159 4.159 25 H 0.073 0.927 26 H 0.032 0.968 27 H 0.076 0.924 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.030 0.970 31 H 0.083 0.917 32 H 0.378 0.622 33 H -0.252 1.252 34 H -0.258 1.258 35 H 0.144 0.856 36 H 0.405 0.595 37 H 0.399 0.601 38 H 0.403 0.597 39 H 0.090 0.910 40 H 0.120 0.880 41 H 0.381 0.619 42 H 0.111 0.889 43 H 0.089 0.911 44 H 0.128 0.872 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.602 5.342 -1.754 9.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.230 5.230 3 C -0.115 4.115 4 C 0.049 3.951 5 C -0.060 4.060 6 C -0.162 4.162 7 O -0.335 6.335 8 Si 0.567 3.433 9 C -0.069 4.069 10 C -0.137 4.137 11 C 0.351 3.649 12 O -0.393 6.393 13 N -0.354 5.354 14 C 0.043 3.957 15 C 0.315 3.685 16 N -0.412 5.412 17 O -0.405 6.405 18 C -0.154 4.154 19 C 0.022 3.978 20 H 0.099 0.901 21 O -0.349 6.349 22 C -0.194 4.194 23 C -0.085 4.085 24 C -0.179 4.179 25 H 0.092 0.908 26 H 0.051 0.949 27 H 0.095 0.905 28 H 0.093 0.907 29 H 0.094 0.906 30 H 0.049 0.951 31 H 0.101 0.899 32 H 0.225 0.775 33 H -0.176 1.176 34 H -0.183 1.183 35 H 0.162 0.838 36 H 0.242 0.758 37 H 0.227 0.773 38 H 0.234 0.766 39 H 0.109 0.891 40 H 0.138 0.862 41 H 0.229 0.771 42 H 0.129 0.871 43 H 0.107 0.893 44 H 0.146 0.854 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -5.559 3.343 -1.322 6.620 hybrid contribution -0.824 1.928 -0.256 2.112 sum -6.383 5.271 -1.578 8.427 Atomic orbital electron populations 1.22521 0.85474 1.03003 1.01259 1.59383 1.08392 1.14697 1.40490 1.22449 1.01655 0.86550 1.00848 1.18798 0.94440 0.93053 0.88822 1.19117 0.97786 0.95288 0.93785 1.24490 0.95688 1.02709 0.93348 1.86573 1.60757 1.52572 1.33585 0.95284 0.87028 0.79058 0.81972 1.21177 0.96281 0.98813 0.90628 1.19720 1.02576 0.98210 0.93221 1.18189 0.80323 0.83863 0.82505 1.90875 1.36712 1.26651 1.85042 1.45433 1.47980 1.37952 1.04036 1.21415 0.96676 0.89253 0.88368 1.20387 0.81995 0.90060 0.76051 1.43766 1.13104 1.16337 1.67966 1.90762 1.53435 1.49673 1.46595 1.23317 0.93163 0.96135 1.02751 1.22690 0.95130 0.85945 0.94022 0.90141 1.86543 1.94695 1.16976 1.36702 1.23932 1.00502 0.99626 0.95364 1.21121 0.94965 0.93382 0.99067 1.21599 1.02322 1.01140 0.92810 0.90847 0.94899 0.90508 0.90651 0.90569 0.95122 0.89939 0.77475 1.17635 1.18306 0.83848 0.75826 0.77279 0.76620 0.89141 0.86231 0.77131 0.87078 0.89294 0.85400 0.85257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.34 60.06 0.56 0.52 16 2 N -0.51 -0.12 4.20 -186.86 -0.78 -0.90 16 3 C 0.03 -0.01 9.38 60.07 0.56 0.55 16 4 C 0.14 0.13 4.70 -83.86 -0.39 -0.27 16 5 C -0.06 -0.11 5.31 -104.49 -0.55 -0.66 16 6 C -0.05 -0.06 2.32 36.00 0.08 0.03 16 7 O -0.53 -1.06 12.86 -35.23 -0.45 -1.52 16 8 Si 0.67 0.67 30.18 -169.99 -5.13 -4.46 16 9 C -0.05 -0.13 8.19 -39.23 -0.32 -0.45 16 10 C -0.13 -0.19 5.88 -104.95 -0.62 -0.80 16 11 C 0.56 1.45 7.24 -12.48 -0.09 1.36 16 12 O -0.52 -3.48 15.04 5.28 0.08 -3.40 16 13 N -0.70 0.48 4.03 -48.95 -0.20 0.29 16 14 C 0.13 0.08 0.96 -132.15 -0.13 -0.05 16 15 C 0.53 1.56 6.61 -10.98 -0.07 1.48 16 16 N -0.85 0.40 8.83 31.22 0.28 0.67 16 17 O -0.53 -3.81 16.74 5.56 0.09 -3.71 16 18 C -0.12 -0.24 6.66 -25.92 -0.17 -0.41 16 19 C 0.08 -0.11 5.27 -25.92 -0.14 -0.24 16 20 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 21 O -0.54 0.72 13.09 -35.23 -0.46 0.26 16 22 C -0.16 0.39 7.20 -25.92 -0.19 0.20 16 23 C -0.07 0.08 9.52 -39.23 -0.37 -0.30 16 24 C -0.16 0.11 8.53 -39.45 -0.34 -0.22 16 25 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 26 H 0.03 -0.08 7.09 -51.93 -0.37 -0.45 16 27 H 0.08 -0.18 8.12 -51.93 -0.42 -0.60 16 28 H 0.07 -0.10 8.12 -51.93 -0.42 -0.52 16 29 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 30 H 0.03 -0.03 7.32 -51.93 -0.38 -0.41 16 31 H 0.08 0.00 7.77 -51.93 -0.40 -0.40 16 32 H 0.38 -0.63 8.74 45.56 0.40 -0.23 16 33 H -0.25 -1.20 6.76 56.52 0.38 -0.82 16 34 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 35 H 0.14 0.50 4.46 -52.49 -0.23 0.27 16 36 H 0.40 -1.49 6.71 -40.82 -0.27 -1.77 16 37 H 0.40 -1.19 8.33 -40.82 -0.34 -1.53 16 38 H 0.40 -0.45 8.93 -40.82 -0.36 -0.82 16 39 H 0.09 0.42 7.38 -51.93 -0.38 0.04 16 40 H 0.12 0.32 7.34 -51.93 -0.38 -0.06 16 41 H 0.38 -2.11 9.12 45.56 0.42 -1.69 16 42 H 0.11 -0.29 8.10 -51.93 -0.42 -0.71 16 43 H 0.09 -0.41 8.10 -51.93 -0.42 -0.83 16 44 H 0.13 -0.54 6.40 -52.49 -0.34 -0.88 16 45 H 0.13 -0.30 6.99 -52.49 -0.37 -0.67 16 LS Contribution 369.39 15.07 5.57 5.57 Total: 0.00 -11.97 369.39 -8.37 -20.35 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -5.19 Total: -13.87 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -2.18 Total: 0.73 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.71 Total: 0.06 kcal Atomic # 8 Polarization: -7.63 SS G_CDS: -0.74 Total: -8.37 kcal Atomic # 14 Polarization: 0.67 SS G_CDS: -5.13 Total: -4.46 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -11.97 -8.37 -20.35 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13422196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.120 kcal (2) G-P(sol) polarization free energy of solvation -11.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.348 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds