Wall clock time and date at job start Sat Mar 6 2021 22:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37866 * 126.46188 * 2 1 4 4 C 1.46679 * 126.23099 * 359.96521 * 3 2 1 5 5 O 1.21694 * 119.99916 * 359.71280 * 4 3 2 6 6 N 1.34774 * 120.00060 * 179.71585 * 4 3 2 7 7 C 1.46499 * 120.00168 * 184.70041 * 6 4 3 8 8 C 1.50704 * 112.85223 * 305.59412 * 7 6 4 9 9 N 1.34776 * 119.99918 * 325.48597 * 8 7 6 10 10 O 1.21275 * 120.00076 * 145.48097 * 8 7 6 11 11 C 1.53784 * 113.61809 * 174.40011 * 7 6 4 12 12 C 1.53785 * 87.07978 * 270.88588 * 11 7 6 13 13 H 1.09004 * 113.61369 * 219.93559 * 12 11 7 14 14 O 1.42903 * 113.61613 * 89.11152 * 12 11 7 15 15 C 1.53787 * 113.61313 * 76.89888 * 7 6 4 16 16 N 1.37649 * 107.53600 * 179.70184 * 3 2 1 17 17 C 1.35534 * 108.64359 * 0.26447 * 16 3 2 18 18 C 1.50700 * 125.56296 * 180.02562 * 17 16 3 19 19 O 1.42903 * 109.47141 * 299.99584 * 18 17 16 20 20 Si 1.86302 * 109.46864 * 179.97438 * 18 17 16 21 21 C 1.35456 * 108.87181 * 359.97438 * 17 16 3 22 22 H 1.08999 * 109.47081 * 89.99817 * 1 2 3 23 23 H 1.09000 * 109.47263 * 210.00286 * 1 2 3 24 24 H 1.09006 * 109.46868 * 329.99668 * 1 2 3 25 25 H 0.96999 * 119.99973 * 4.98257 * 6 4 3 26 26 H 0.97001 * 120.00051 * 354.99449 * 9 8 7 27 27 H 0.96996 * 120.00332 * 174.98724 * 9 8 7 28 28 H 1.08997 * 113.61330 * 25.43313 * 11 7 6 29 29 H 1.09001 * 113.61675 * 156.33701 * 11 7 6 30 30 H 0.96702 * 113.99557 * 179.97438 * 14 12 11 31 31 H 1.08999 * 113.61487 * 203.66421 * 15 7 6 32 32 H 1.08990 * 113.61237 * 334.57320 * 15 7 6 33 33 H 0.97005 * 125.68062 * 180.27730 * 16 3 2 34 34 H 1.08997 * 109.47226 * 60.00060 * 18 17 16 35 35 H 0.96703 * 114.00079 * 300.00339 * 19 18 17 36 36 H 1.48505 * 109.99600 * 180.02562 * 20 18 17 37 37 H 1.48498 * 110.00083 * 301.31508 * 20 18 17 38 38 H 1.07991 * 126.06412 * 179.97438 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8900 2.5092 -0.0007 5 8 0.7028 2.7765 -0.0067 6 7 2.8038 3.4998 0.0052 7 6 2.3706 4.8954 0.1084 8 6 1.3645 5.2756 -0.9473 9 7 1.4444 4.7360 -2.1797 10 8 0.4830 6.0670 -0.6878 11 6 3.5333 5.8934 0.2389 12 6 3.4308 5.6932 1.7602 13 1 3.5596 6.6127 2.3313 14 8 4.2334 4.6177 2.2515 15 6 1.9593 5.3091 1.5314 16 7 3.6284 0.6623 0.0068 17 6 3.6217 -0.6930 0.0051 18 6 4.8433 -1.5755 0.0114 19 8 5.6310 -1.3069 -1.1503 20 14 4.3181 -3.3629 0.0067 21 6 2.3379 -1.1248 -0.0022 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8900 0.5139 25 1 3.7481 3.2889 -0.0631 26 1 2.1901 4.1597 -2.4095 27 1 0.7561 4.9237 -2.8369 28 1 4.4691 5.5316 -0.1870 29 1 3.2812 6.9026 -0.0867 30 1 4.1733 4.4872 3.2078 31 1 1.2770 6.1586 1.5591 32 1 1.6246 4.4756 2.1487 33 1 4.4192 1.2242 0.0122 34 1 5.4332 -1.3729 0.9053 35 1 5.1685 -1.4659 -1.9845 36 1 5.5138 -4.2436 0.0136 37 1 3.4720 -3.6468 1.1937 38 1 2.0136 -2.1549 -0.0056 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13940406.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:40:51 Heat of formation + Delta-G solvation = -74.167847 kcal Electronic energy + Delta-G solvation = -25019.910648 eV Core-core repulsion = 21251.823472 eV Total energy + Delta-G solvation = -3768.087177 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.73894 -41.98123 -39.55957 -39.14956 -37.83084 -36.23694 -34.71419 -34.11716 -33.29543 -31.59511 -28.19026 -27.60543 -27.14225 -26.21580 -23.09005 -22.27857 -21.66121 -20.53850 -20.34879 -19.58470 -19.02133 -18.26101 -18.03184 -17.86464 -16.83960 -16.71910 -16.41082 -15.91062 -15.64963 -15.52078 -15.36110 -15.28793 -14.84709 -14.58743 -14.39460 -14.01916 -13.84623 -13.66772 -13.58514 -13.49172 -13.17676 -12.93103 -12.55666 -12.18422 -12.04294 -11.89501 -11.32145 -11.09281 -10.96989 -10.76784 -10.57871 -10.13628 -9.84327 -9.19344 -5.08935 0.32078 1.08469 1.48335 1.50379 1.61474 1.81085 1.87832 2.12636 2.27408 2.54429 2.77986 3.20667 3.24313 3.38015 3.47935 3.54123 3.72844 3.86544 4.11205 4.15851 4.22176 4.33672 4.42024 4.45906 4.65104 4.71525 4.72776 4.81818 4.91215 5.00011 5.18859 5.22321 5.42144 5.60522 5.84861 5.87438 6.18577 6.32968 6.33446 6.39171 6.43820 7.06165 7.31371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.056 4.056 4 C 0.590 3.410 5 O -0.507 6.507 6 N -0.705 5.705 7 C 0.134 3.866 8 C 0.540 3.460 9 N -0.846 5.846 10 O -0.532 6.532 11 C -0.120 4.120 12 C 0.082 3.918 13 H 0.082 0.918 14 O -0.552 6.552 15 C -0.154 4.154 16 N -0.522 5.522 17 C 0.028 3.972 18 C -0.055 4.055 19 O -0.543 6.543 20 Si 0.721 3.279 21 C -0.202 4.202 22 H 0.070 0.930 23 H 0.065 0.935 24 H 0.080 0.920 25 H 0.402 0.598 26 H 0.398 0.602 27 H 0.403 0.597 28 H 0.091 0.909 29 H 0.118 0.882 30 H 0.387 0.613 31 H 0.115 0.885 32 H 0.083 0.917 33 H 0.417 0.583 34 H 0.116 0.884 35 H 0.383 0.617 36 H -0.253 1.253 37 H -0.253 1.253 38 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.543 -2.133 -1.649 5.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.169 4.169 4 C 0.378 3.622 5 O -0.381 6.381 6 N -0.360 5.360 7 C 0.044 3.956 8 C 0.322 3.678 9 N -0.408 5.408 10 O -0.407 6.407 11 C -0.158 4.158 12 C 0.022 3.978 13 H 0.100 0.900 14 O -0.358 6.358 15 C -0.193 4.193 16 N -0.118 5.118 17 C -0.090 4.090 18 C -0.165 4.165 19 O -0.349 6.349 20 Si 0.620 3.380 21 C -0.226 4.226 22 H 0.089 0.911 23 H 0.084 0.916 24 H 0.099 0.901 25 H 0.238 0.762 26 H 0.225 0.775 27 H 0.235 0.765 28 H 0.110 0.890 29 H 0.136 0.864 30 H 0.235 0.765 31 H 0.133 0.867 32 H 0.102 0.898 33 H 0.255 0.745 34 H 0.133 0.867 35 H 0.231 0.769 36 H -0.178 1.178 37 H -0.177 1.177 38 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.893 -1.926 -1.040 4.466 hybrid contribution 1.048 0.508 0.465 1.254 sum 4.941 -1.418 -0.574 5.173 Atomic orbital electron populations 1.20396 0.88848 1.03238 1.02583 1.19933 0.96009 0.90312 1.00753 1.20105 0.83628 0.93100 1.20033 1.17087 0.85831 0.82936 0.76327 1.90902 1.15679 1.82803 1.48762 1.45512 1.09940 1.04093 1.76430 1.21412 0.95758 0.82602 0.95861 1.20139 0.84763 0.79910 0.82944 1.43708 1.29749 1.52786 1.14575 1.90755 1.34958 1.34563 1.80462 1.23340 0.97144 0.99595 0.95695 1.22670 0.90026 0.90196 0.94877 0.90039 1.86357 1.67931 1.53024 1.28498 1.23964 0.97993 1.03614 0.93721 1.41854 1.07126 1.06551 1.56308 1.21102 0.96823 0.83340 1.07762 1.24965 0.91123 1.08991 0.91445 1.86503 1.41419 1.91267 1.15674 0.94024 0.82193 0.72880 0.88895 1.20609 0.90795 0.99097 1.12118 0.91128 0.91629 0.90106 0.76206 0.77477 0.76549 0.88997 0.86399 0.76487 0.86679 0.89793 0.74486 0.86699 0.76911 1.17791 1.17699 0.83228 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.14 9.83 36.01 0.35 0.21 16 2 C -0.06 -0.10 6.21 -104.16 -0.65 -0.75 16 3 C -0.06 -0.06 7.05 -81.98 -0.58 -0.64 16 4 C 0.59 1.10 7.37 -12.85 -0.09 1.01 16 5 O -0.51 -2.73 13.61 5.19 0.07 -2.66 16 6 N -0.71 0.61 4.20 -49.21 -0.21 0.40 16 7 C 0.13 0.05 1.01 -132.15 -0.13 -0.08 16 8 C 0.54 1.65 5.83 -10.98 -0.06 1.59 16 9 N -0.85 -0.18 8.54 31.22 0.27 0.09 16 10 O -0.53 -3.81 16.76 5.56 0.09 -3.72 16 11 C -0.12 0.23 7.16 -25.91 -0.19 0.05 16 12 C 0.08 -0.15 5.28 -25.91 -0.14 -0.28 16 13 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 14 O -0.55 1.11 13.07 -35.23 -0.46 0.65 16 15 C -0.15 -0.12 7.07 -25.91 -0.18 -0.30 16 16 N -0.52 0.65 5.99 -5.70 -0.03 0.62 16 17 C 0.03 -0.03 6.47 -81.95 -0.53 -0.56 16 18 C -0.05 0.11 3.08 36.01 0.11 0.22 16 19 O -0.54 1.04 12.88 -35.23 -0.45 0.59 16 20 Si 0.72 -1.78 30.54 -169.99 -5.19 -6.97 16 21 C -0.20 0.03 9.27 -39.98 -0.37 -0.35 16 22 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 23 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 24 H 0.08 0.28 6.49 -51.93 -0.34 -0.05 16 25 H 0.40 -1.17 7.75 -40.82 -0.32 -1.49 16 26 H 0.40 -0.82 8.43 -40.82 -0.34 -1.17 16 27 H 0.40 -0.08 8.93 -40.82 -0.36 -0.45 16 28 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 29 H 0.12 -0.27 8.09 -51.93 -0.42 -0.69 16 30 H 0.39 -1.88 9.12 45.56 0.42 -1.46 16 31 H 0.11 0.21 7.35 -51.93 -0.38 -0.17 16 32 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 33 H 0.42 -1.34 8.20 -40.82 -0.33 -1.68 16 34 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 35 H 0.38 -2.07 8.70 45.56 0.40 -1.67 16 36 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 37 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 38 H 0.15 -0.29 6.17 -52.49 -0.32 -0.61 16 LS Contribution 323.31 15.07 4.87 4.87 Total: 0.00 -10.61 323.31 -7.24 -17.85 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -3.73 Total: -11.83 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: -2.46 Total: 0.12 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: 0.03 Total: 1.11 kcal Atomic # 8 Polarization: -4.39 SS G_CDS: -0.75 Total: -5.14 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.19 Total: -6.97 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -10.61 -7.24 -17.85 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13940406.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.317 kcal (2) G-P(sol) polarization free energy of solvation -10.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.932 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.850 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds