Wall clock time and date at job start Sat Mar 6 2021 22:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37866 * 126.46188 * 2 1 4 4 C 1.46679 * 126.23099 * 359.96521 * 3 2 1 5 5 O 1.21694 * 119.99916 * 359.71280 * 4 3 2 6 6 N 1.34774 * 120.00060 * 179.71585 * 4 3 2 7 7 C 1.46499 * 120.00168 * 184.70041 * 6 4 3 8 8 C 1.50704 * 112.85223 * 305.59412 * 7 6 4 9 9 N 1.34776 * 119.99918 * 325.48597 * 8 7 6 10 10 O 1.21275 * 120.00076 * 145.48097 * 8 7 6 11 11 C 1.53784 * 113.61809 * 174.40011 * 7 6 4 12 12 C 1.53785 * 87.07978 * 270.88588 * 11 7 6 13 13 H 1.09004 * 113.61369 * 219.93559 * 12 11 7 14 14 O 1.42903 * 113.61613 * 89.11152 * 12 11 7 15 15 C 1.53787 * 113.61313 * 76.89888 * 7 6 4 16 16 N 1.37649 * 107.53600 * 179.70184 * 3 2 1 17 17 C 1.35534 * 108.64359 * 0.26447 * 16 3 2 18 18 C 1.50700 * 125.56296 * 180.02562 * 17 16 3 19 19 O 1.42903 * 109.47141 * 299.99584 * 18 17 16 20 20 Si 1.86302 * 109.46864 * 179.97438 * 18 17 16 21 21 C 1.35456 * 108.87181 * 359.97438 * 17 16 3 22 22 H 1.08999 * 109.47081 * 89.99817 * 1 2 3 23 23 H 1.09000 * 109.47263 * 210.00286 * 1 2 3 24 24 H 1.09006 * 109.46868 * 329.99668 * 1 2 3 25 25 H 0.96999 * 119.99973 * 4.98257 * 6 4 3 26 26 H 0.97001 * 120.00051 * 354.99449 * 9 8 7 27 27 H 0.96996 * 120.00332 * 174.98724 * 9 8 7 28 28 H 1.08997 * 113.61330 * 25.43313 * 11 7 6 29 29 H 1.09001 * 113.61675 * 156.33701 * 11 7 6 30 30 H 0.96702 * 113.99557 * 179.97438 * 14 12 11 31 31 H 1.08999 * 113.61487 * 203.66421 * 15 7 6 32 32 H 1.08990 * 113.61237 * 334.57320 * 15 7 6 33 33 H 0.97005 * 125.68062 * 180.27730 * 16 3 2 34 34 H 1.08997 * 109.47226 * 60.00060 * 18 17 16 35 35 H 0.96703 * 114.00079 * 300.00339 * 19 18 17 36 36 H 1.48505 * 109.99600 * 180.02562 * 20 18 17 37 37 H 1.48498 * 110.00083 * 301.31508 * 20 18 17 38 38 H 1.07991 * 126.06412 * 179.97438 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8900 2.5092 -0.0007 5 8 0.7028 2.7765 -0.0067 6 7 2.8038 3.4998 0.0052 7 6 2.3706 4.8954 0.1084 8 6 1.3645 5.2756 -0.9473 9 7 1.4444 4.7360 -2.1797 10 8 0.4830 6.0670 -0.6878 11 6 3.5333 5.8934 0.2389 12 6 3.4308 5.6932 1.7602 13 1 3.5596 6.6127 2.3313 14 8 4.2334 4.6177 2.2515 15 6 1.9593 5.3091 1.5314 16 7 3.6284 0.6623 0.0068 17 6 3.6217 -0.6930 0.0051 18 6 4.8433 -1.5755 0.0114 19 8 5.6310 -1.3069 -1.1503 20 14 4.3181 -3.3629 0.0067 21 6 2.3379 -1.1248 -0.0022 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8900 0.5139 25 1 3.7481 3.2889 -0.0631 26 1 2.1901 4.1597 -2.4095 27 1 0.7561 4.9237 -2.8369 28 1 4.4691 5.5316 -0.1870 29 1 3.2812 6.9026 -0.0867 30 1 4.1733 4.4872 3.2078 31 1 1.2770 6.1586 1.5591 32 1 1.6246 4.4756 2.1487 33 1 4.4192 1.2242 0.0122 34 1 5.4332 -1.3729 0.9053 35 1 5.1685 -1.4659 -1.9845 36 1 5.5138 -4.2436 0.0136 37 1 3.4720 -3.6468 1.1937 38 1 2.0136 -2.1549 -0.0056 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13940406.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:40:51 Heat of formation + Delta-G solvation = -84.306345 kcal Electronic energy + Delta-G solvation = -25020.350287 eV Core-core repulsion = 21251.823472 eV Total energy + Delta-G solvation = -3768.526815 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.75969 -42.01292 -39.74672 -39.22473 -37.68004 -36.21751 -34.80898 -34.20019 -33.34407 -31.55239 -28.23544 -27.59668 -27.09977 -26.22174 -23.16375 -22.27220 -21.61270 -20.59502 -20.37376 -19.58033 -19.07145 -18.17393 -18.02464 -17.90826 -16.82135 -16.67919 -16.44495 -15.96391 -15.73068 -15.58242 -15.36090 -15.33993 -14.87450 -14.62833 -14.37441 -13.96238 -13.78812 -13.64916 -13.57986 -13.54607 -13.27319 -12.99252 -12.58656 -12.17488 -11.99447 -11.79508 -11.46298 -11.21527 -10.95500 -10.75577 -10.65698 -10.25016 -9.82511 -9.21259 -4.90895 0.26786 1.23199 1.34431 1.50665 1.72767 1.79624 1.94773 2.17000 2.21564 2.47418 2.92963 3.23874 3.40582 3.48120 3.56540 3.61843 3.71535 3.91256 4.11662 4.21590 4.29263 4.43432 4.55134 4.62441 4.69579 4.71029 4.77603 4.80435 4.83216 4.88478 5.13465 5.20601 5.34818 5.60023 5.75004 5.83126 6.22572 6.30555 6.43326 6.69118 6.73451 6.98389 7.17414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.083 4.083 3 C -0.066 4.066 4 C 0.590 3.410 5 O -0.549 6.549 6 N -0.685 5.685 7 C 0.130 3.870 8 C 0.532 3.468 9 N -0.833 5.833 10 O -0.583 6.583 11 C -0.110 4.110 12 C 0.095 3.905 13 H 0.099 0.901 14 O -0.558 6.558 15 C -0.163 4.163 16 N -0.509 5.509 17 C 0.038 3.962 18 C -0.052 4.052 19 O -0.553 6.553 20 Si 0.800 3.200 21 C -0.209 4.209 22 H 0.071 0.929 23 H 0.076 0.924 24 H 0.056 0.944 25 H 0.416 0.584 26 H 0.410 0.590 27 H 0.405 0.595 28 H 0.112 0.888 29 H 0.122 0.878 30 H 0.399 0.601 31 H 0.098 0.902 32 H 0.065 0.935 33 H 0.428 0.572 34 H 0.117 0.883 35 H 0.399 0.601 36 H -0.295 1.295 37 H -0.287 1.287 38 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.570 -2.586 -2.032 7.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.092 4.092 3 C -0.179 4.179 4 C 0.379 3.621 5 O -0.426 6.426 6 N -0.340 5.340 7 C 0.039 3.961 8 C 0.316 3.684 9 N -0.395 5.395 10 O -0.462 6.462 11 C -0.147 4.147 12 C 0.036 3.964 13 H 0.116 0.884 14 O -0.366 6.366 15 C -0.202 4.202 16 N -0.107 5.107 17 C -0.082 4.082 18 C -0.162 4.162 19 O -0.361 6.361 20 Si 0.705 3.295 21 C -0.233 4.233 22 H 0.089 0.911 23 H 0.095 0.905 24 H 0.075 0.925 25 H 0.254 0.746 26 H 0.240 0.760 27 H 0.236 0.764 28 H 0.130 0.870 29 H 0.141 0.859 30 H 0.250 0.750 31 H 0.117 0.883 32 H 0.084 0.916 33 H 0.268 0.732 34 H 0.134 0.866 35 H 0.249 0.751 36 H -0.222 1.222 37 H -0.214 1.214 38 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 5.986 -2.380 -1.461 6.606 hybrid contribution 0.442 0.568 0.587 0.929 sum 6.428 -1.812 -0.874 6.736 Atomic orbital electron populations 1.20321 0.89413 1.02542 1.02427 1.20120 0.96102 0.91342 1.01623 1.19955 0.84537 0.92525 1.20933 1.17245 0.85489 0.83632 0.75704 1.90892 1.17457 1.83414 1.50836 1.45298 1.10215 1.03222 1.75274 1.21459 0.96420 0.83502 0.94688 1.20646 0.84612 0.79260 0.83896 1.43639 1.29968 1.51978 1.13889 1.90722 1.37095 1.36956 1.81407 1.23363 0.96666 0.99065 0.95653 1.22583 0.87761 0.90747 0.95327 0.88363 1.86320 1.67436 1.52971 1.29876 1.23974 0.99824 1.02455 0.93968 1.41791 1.06722 1.06668 1.55474 1.21276 0.96952 0.83404 1.06526 1.25003 0.90626 1.08783 0.91795 1.86481 1.41870 1.91257 1.16446 0.93032 0.78878 0.70716 0.86917 1.20812 0.90850 0.99467 1.12141 0.91077 0.90481 0.92540 0.74626 0.76025 0.76351 0.86973 0.85944 0.74996 0.88327 0.91602 0.73217 0.86586 0.75054 1.22225 1.21363 0.81722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.40 9.83 71.24 0.70 0.30 16 2 C -0.08 -0.30 6.21 -19.56 -0.12 -0.42 16 3 C -0.07 -0.15 7.05 40.35 0.28 0.14 16 4 C 0.59 2.70 7.37 86.45 0.64 3.34 16 5 O -0.55 -7.08 13.61 -4.33 -0.06 -7.14 16 6 N -0.69 1.21 4.20 -427.82 -1.80 -0.59 16 7 C 0.13 0.16 1.01 3.39 0.00 0.17 16 8 C 0.53 3.99 5.83 87.66 0.51 4.50 16 9 N -0.83 -1.00 8.54 -173.54 -1.48 -2.49 16 10 O -0.58 -9.78 16.76 -3.01 -0.05 -9.83 16 11 C -0.11 0.53 7.16 31.12 0.22 0.75 16 12 C 0.10 -0.41 5.28 31.12 0.16 -0.25 16 13 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 14 O -0.56 3.01 13.07 -148.98 -1.95 1.06 16 15 C -0.16 -0.46 7.07 31.13 0.22 -0.24 16 16 N -0.51 1.81 5.99 -171.93 -1.03 0.78 16 17 C 0.04 -0.12 6.47 41.34 0.27 0.15 16 18 C -0.05 0.29 3.08 71.24 0.22 0.51 16 19 O -0.55 3.19 12.88 -148.98 -1.92 1.27 16 20 Si 0.80 -4.52 30.54 68.60 2.10 -2.42 16 21 C -0.21 0.19 9.27 22.01 0.20 0.40 16 22 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 23 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 24 H 0.06 0.54 6.49 -2.38 -0.02 0.53 16 25 H 0.42 -2.94 7.75 -92.71 -0.72 -3.66 16 26 H 0.41 -1.71 8.43 -92.71 -0.78 -2.49 16 27 H 0.41 0.26 8.93 -92.71 -0.83 -0.57 16 28 H 0.11 -0.97 8.10 -2.39 -0.02 -0.99 16 29 H 0.12 -0.65 8.09 -2.39 -0.02 -0.67 16 30 H 0.40 -4.36 9.12 -74.06 -0.68 -5.03 16 31 H 0.10 0.61 7.35 -2.39 -0.02 0.59 16 32 H 0.07 0.40 8.14 -2.39 -0.02 0.38 16 33 H 0.43 -3.48 8.20 -92.70 -0.76 -4.24 16 34 H 0.12 -0.61 7.96 -2.39 -0.02 -0.63 16 35 H 0.40 -5.17 8.70 -74.06 -0.64 -5.82 16 36 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 37 H -0.29 -0.06 7.11 99.48 0.71 0.65 16 38 H 0.17 -0.79 6.17 -2.92 -0.02 -0.81 16 Total: 0.00 -26.83 323.31 -6.06 -32.89 By element: Atomic # 1 Polarization: -19.69 SS G_CDS: -3.18 Total: -22.87 kcal Atomic # 6 Polarization: 6.03 SS G_CDS: 3.31 Total: 9.34 kcal Atomic # 7 Polarization: 2.02 SS G_CDS: -4.31 Total: -2.30 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: -3.98 Total: -14.64 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.10 Total: -2.42 kcal Total: -26.83 -6.06 -32.89 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13940406.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.413 kcal (2) G-P(sol) polarization free energy of solvation -26.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.061 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds