Wall clock time and date at job start Sat Mar 6 2021 22:40:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21279 * 120.00348 * 2 1 4 4 C 1.50702 * 119.99828 * 180.02562 * 2 1 3 5 5 N 1.46498 * 112.84906 * 323.88213 * 4 2 1 6 6 C 1.34772 * 120.00097 * 293.51648 * 5 4 2 7 7 O 1.21284 * 119.99642 * 354.99264 * 6 5 4 8 8 C 1.50698 * 120.00172 * 174.99174 * 6 5 4 9 9 C 1.53536 * 109.82309 * 280.00057 * 8 6 5 10 10 C 1.53044 * 108.56341 * 179.45021 * 9 8 6 11 11 C 1.50201 * 110.31896 * 49.56775 * 10 9 8 12 12 C 1.50692 * 118.54654 * 159.92537 * 11 10 9 13 13 O 1.42902 * 109.47461 * 300.02260 * 12 11 10 14 14 Si 1.86307 * 109.47012 * 180.02562 * 12 11 10 15 15 C 1.31115 * 122.90374 * 339.95343 * 11 10 9 16 16 N 1.38925 * 121.85416 * 0.40152 * 15 11 10 17 17 C 1.53777 * 113.61367 * 192.68423 * 4 2 1 18 18 C 1.53786 * 87.08439 * 270.79869 * 17 4 2 19 19 H 1.08998 * 113.61463 * 89.19904 * 18 17 4 20 20 O 1.42896 * 113.61502 * 220.01778 * 18 17 4 21 21 C 1.53782 * 113.69044 * 95.14846 * 4 2 1 22 22 H 0.96997 * 120.00413 * 174.98434 * 1 2 3 23 23 H 0.97003 * 119.99441 * 354.98388 * 1 2 3 24 24 H 0.97007 * 120.00105 * 113.51850 * 5 4 2 25 25 H 1.08999 * 109.81486 * 40.86543 * 8 6 5 26 26 H 1.09002 * 109.62344 * 59.72706 * 9 8 6 27 27 H 1.09003 * 109.77646 * 299.26269 * 9 8 6 28 28 H 1.09005 * 109.32275 * 289.31020 * 10 9 8 29 29 H 1.08994 * 109.33063 * 169.83171 * 10 9 8 30 30 H 1.08999 * 109.47198 * 60.02882 * 12 11 10 31 31 H 0.96694 * 113.99979 * 179.97438 * 13 12 11 32 32 H 1.48498 * 109.99825 * 60.00307 * 14 12 11 33 33 H 1.48499 * 109.99894 * 181.31797 * 14 12 11 34 34 H 1.08002 * 119.07199 * 180.12274 * 15 11 10 35 35 H 0.97000 * 120.55838 * 166.65933 * 16 15 11 36 36 H 1.08997 * 113.61750 * 25.34799 * 17 4 2 37 37 H 1.09000 * 113.61648 * 156.25301 * 17 4 2 38 38 H 0.96704 * 114.00068 * 179.97438 * 20 18 17 39 39 H 1.08998 * 113.61511 * 203.67576 * 21 4 2 40 40 H 1.08999 * 113.62034 * 334.58170 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4412 -2.3434 0.7947 6 6 1.3428 -2.2074 2.1320 7 8 1.8791 -1.2720 2.6874 8 6 0.5665 -3.2174 2.9370 9 6 -0.9361 -2.9172 2.8394 10 6 -1.6964 -3.9660 3.6543 11 6 -1.0964 -4.0971 5.0250 12 6 -1.9319 -4.7056 6.1217 13 8 -3.1109 -3.9212 6.3134 14 14 -0.9479 -4.7442 7.7032 15 6 0.1219 -3.7049 5.3097 16 7 0.9483 -3.1272 4.3541 17 6 3.5997 -1.1515 0.3089 18 6 3.8129 -0.9688 -1.2031 19 1 3.7376 0.0674 -1.5327 20 8 4.9807 -1.6256 -1.7000 21 6 2.5196 -1.7764 -1.4033 22 1 -0.4850 -0.8368 -0.0734 23 1 -0.4849 0.8369 0.0735 24 1 1.0749 -3.1288 0.3589 25 1 0.7678 -4.2214 2.5633 26 1 -1.2518 -2.9640 1.7972 27 1 -1.1405 -1.9241 3.2395 28 1 -1.6432 -4.9277 3.1437 29 1 -2.7403 -3.6656 3.7446 30 1 -2.2125 -5.7214 5.8435 31 1 -3.6973 -4.2554 7.0058 32 1 -0.5592 -3.3651 8.0933 33 1 -1.7493 -5.3711 8.7848 34 1 0.4918 -3.8305 6.3166 35 1 1.7632 -2.6715 4.6172 36 1 3.8359 -0.2625 0.8936 37 1 4.0581 -2.0561 0.7083 38 1 5.1200 -1.5147 -2.6505 39 1 2.6827 -2.8520 -1.4720 40 1 1.8839 -1.3920 -2.2009 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_15413834.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:40:56 Heat of formation + Delta-G solvation = -106.053881 kcal Electronic energy + Delta-G solvation = -25231.353317 eV Core-core repulsion = 21434.571979 eV Total energy + Delta-G solvation = -3796.781338 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.141 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.41831 -40.90429 -39.38092 -38.96952 -37.51809 -36.47253 -34.92568 -34.18884 -33.25604 -32.77745 -27.98072 -27.09028 -26.23038 -25.25746 -23.72270 -22.97854 -21.71476 -20.50751 -19.44958 -19.16268 -18.85803 -18.42149 -18.33431 -17.72205 -17.51522 -16.88708 -16.55746 -16.02357 -16.00489 -15.58395 -15.37269 -15.27538 -14.76553 -14.70299 -14.38031 -14.12630 -13.91367 -13.77490 -13.56219 -13.36851 -13.27789 -13.09626 -12.62086 -12.56778 -11.89471 -11.75615 -11.61548 -11.53428 -11.25354 -11.02941 -10.84335 -10.81911 -10.33593 -10.31439 -8.42132 -4.93072 1.21262 1.28949 1.33977 1.47426 1.58067 1.74421 1.97996 2.28976 2.59322 3.09797 3.22300 3.36330 3.52087 3.58140 3.60407 3.75575 3.82968 3.98778 4.06828 4.14262 4.27853 4.48793 4.54973 4.57861 4.61962 4.67097 4.76748 4.81614 4.84149 4.91688 5.07642 5.19706 5.23654 5.33542 5.60372 5.69000 6.18829 6.27679 6.40983 6.69006 6.79347 6.83197 7.02818 7.12532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.829 5.829 2 C 0.531 3.469 3 O -0.578 6.578 4 C 0.133 3.867 5 N -0.691 5.691 6 C 0.513 3.487 7 O -0.561 6.561 8 C 0.141 3.859 9 C -0.122 4.122 10 C -0.053 4.053 11 C -0.246 4.246 12 C -0.053 4.053 13 O -0.562 6.562 14 Si 0.733 3.267 15 C 0.136 3.864 16 N -0.739 5.739 17 C -0.115 4.115 18 C 0.079 3.921 19 H 0.082 0.918 20 O -0.569 6.569 21 C -0.129 4.129 22 H 0.417 0.583 23 H 0.408 0.592 24 H 0.430 0.570 25 H 0.127 0.873 26 H 0.113 0.887 27 H 0.046 0.954 28 H 0.090 0.910 29 H 0.066 0.934 30 H 0.087 0.913 31 H 0.388 0.612 32 H -0.312 1.312 33 H -0.295 1.295 34 H 0.137 0.863 35 H 0.406 0.594 36 H 0.054 0.946 37 H 0.100 0.900 38 H 0.399 0.601 39 H 0.136 0.864 40 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.552 -9.305 -6.305 11.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.313 3.687 3 O -0.456 6.456 4 C 0.042 3.958 5 N -0.348 5.348 6 C 0.299 3.701 7 O -0.438 6.438 8 C 0.033 3.967 9 C -0.160 4.160 10 C -0.090 4.090 11 C -0.256 4.256 12 C -0.163 4.163 13 O -0.371 6.371 14 Si 0.641 3.359 15 C 0.016 3.984 16 N -0.371 5.371 17 C -0.154 4.154 18 C 0.019 3.981 19 H 0.099 0.901 20 O -0.378 6.378 21 C -0.167 4.167 22 H 0.248 0.752 23 H 0.240 0.760 24 H 0.271 0.729 25 H 0.144 0.856 26 H 0.132 0.868 27 H 0.065 0.935 28 H 0.108 0.892 29 H 0.084 0.916 30 H 0.105 0.895 31 H 0.237 0.763 32 H -0.241 1.241 33 H -0.223 1.223 34 H 0.154 0.846 35 H 0.242 0.758 36 H 0.073 0.927 37 H 0.119 0.881 38 H 0.250 0.750 39 H 0.154 0.846 40 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.328 -7.676 -5.083 9.496 hybrid contribution -1.504 0.784 0.268 1.717 sum -3.832 -6.892 -4.815 9.240 Atomic orbital electron populations 1.43605 1.06012 1.14314 1.75331 1.20387 0.83670 0.90136 0.74463 1.90767 1.69334 1.34366 1.51121 1.21315 0.91909 0.86620 0.95977 1.45619 1.59764 1.23703 1.05703 1.21109 0.79672 0.86290 0.82990 1.90801 1.47270 1.34459 1.71246 1.21181 0.94676 0.98575 0.82318 1.21862 0.91833 0.99377 1.02957 1.19982 0.98675 0.99109 0.91272 1.20134 0.93841 1.14153 0.97463 1.24597 0.90257 0.96516 1.04952 1.86541 1.34225 1.56071 1.60308 0.94908 0.85563 0.80176 0.75211 1.20360 0.90891 0.94329 0.92868 1.44360 1.27081 1.62158 1.03544 1.23204 0.92721 1.03043 0.96464 1.23114 0.85137 0.95701 0.94175 0.90061 1.86489 1.44859 1.75872 1.30561 1.23928 0.96702 1.04075 0.92043 0.75195 0.75998 0.72889 0.85555 0.86836 0.93489 0.89171 0.91580 0.89501 0.76251 1.24116 1.22308 0.84640 0.75796 0.92690 0.88145 0.74994 0.84594 0.87826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.28 8.78 -173.53 -1.52 1.76 16 2 C 0.53 2.10 6.61 87.66 0.58 2.68 16 3 O -0.58 -8.37 16.21 -3.03 -0.05 -8.42 16 4 C 0.13 -0.23 1.05 3.38 0.00 -0.23 16 5 N -0.69 5.34 4.79 -423.93 -2.03 3.31 16 6 C 0.51 -0.52 6.75 87.66 0.59 0.07 16 7 O -0.56 -5.60 15.11 -3.04 -0.05 -5.65 16 8 C 0.14 -0.69 3.36 44.32 0.15 -0.54 16 9 C -0.12 0.65 5.47 30.79 0.17 0.82 16 10 C -0.05 0.17 5.83 29.71 0.17 0.35 16 11 C -0.25 -0.05 5.48 -16.76 -0.09 -0.14 16 12 C -0.05 0.03 2.82 71.23 0.20 0.23 16 13 O -0.56 -1.67 12.51 -148.98 -1.86 -3.53 16 14 Si 0.73 -0.11 29.68 68.60 2.04 1.93 16 15 C 0.14 0.05 9.63 83.41 0.80 0.85 16 16 N -0.74 -0.02 5.47 -329.00 -1.80 -1.82 16 17 C -0.12 -0.55 6.14 31.12 0.19 -0.36 16 18 C 0.08 0.04 4.82 31.12 0.15 0.19 16 19 H 0.08 0.26 7.63 -2.39 -0.02 0.24 16 20 O -0.57 -0.15 13.67 -148.98 -2.04 -2.19 16 21 C -0.13 0.96 7.21 31.12 0.22 1.18 16 22 H 0.42 -4.66 8.47 -92.71 -0.79 -5.45 16 23 H 0.41 -1.61 8.93 -92.71 -0.83 -2.44 16 24 H 0.43 -7.11 8.71 -92.70 -0.81 -7.91 16 25 H 0.13 -1.39 8.14 -2.39 -0.02 -1.41 16 26 H 0.11 -1.44 8.14 -2.39 -0.02 -1.46 16 27 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 28 H 0.09 -0.69 8.14 -2.38 -0.02 -0.71 16 29 H 0.07 0.00 7.82 -2.39 -0.02 -0.02 16 30 H 0.09 -0.40 7.96 -2.39 -0.02 -0.42 16 31 H 0.39 -1.65 8.74 -74.06 -0.65 -2.30 16 32 H -0.31 -2.72 7.11 99.48 0.71 -2.01 16 33 H -0.30 -1.40 7.11 99.48 0.71 -0.70 16 34 H 0.14 -0.19 4.37 -2.91 -0.01 -0.20 16 35 H 0.41 0.78 8.09 -92.71 -0.75 0.04 16 36 H 0.05 0.70 7.63 -2.39 -0.02 0.68 16 37 H 0.10 0.43 8.14 -2.39 -0.02 0.41 16 38 H 0.40 -3.44 9.12 -74.05 -0.68 -4.12 16 39 H 0.14 -1.60 8.14 -2.39 -0.02 -1.62 16 40 H 0.10 -1.08 8.10 -2.39 -0.02 -1.10 16 Total: 0.00 -32.50 330.04 -7.47 -39.97 By element: Atomic # 1 Polarization: -27.14 SS G_CDS: -3.30 Total: -30.45 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: 3.14 Total: 5.09 kcal Atomic # 7 Polarization: 8.60 SS G_CDS: -5.35 Total: 3.25 kcal Atomic # 8 Polarization: -15.80 SS G_CDS: -4.00 Total: -19.79 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.04 Total: 1.93 kcal Total: -32.50 -7.47 -39.97 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_15413834.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.082 kcal (2) G-P(sol) polarization free energy of solvation -32.499 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.971 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds