Wall clock time and date at job start Sat Mar 6 2021 22:40:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21283 * 120.00075 * 2 1 4 4 C 1.50705 * 119.99876 * 179.97438 * 2 1 3 5 5 N 1.46495 * 112.85036 * 326.54141 * 4 2 1 6 6 C 1.34779 * 120.00124 * 174.71355 * 5 4 2 7 7 O 1.21286 * 119.99786 * 355.16808 * 6 5 4 8 8 C 1.50693 * 120.00369 * 175.16503 * 6 5 4 9 9 C 1.53043 * 109.33179 * 179.65412 * 8 6 5 10 10 C 1.53543 * 108.56262 * 169.82815 * 9 8 6 11 11 N 1.47023 * 107.65960 * 299.05601 * 10 9 8 12 12 C 1.38926 * 118.88834 * 43.65998 * 11 10 9 13 13 C 1.30885 * 121.77923 * 346.52001 * 12 11 10 14 14 C 1.50708 * 118.37875 * 180.55745 * 13 12 11 15 15 O 1.42901 * 109.46816 * 120.16580 * 14 13 12 16 16 Si 1.86302 * 109.46850 * 0.16736 * 14 13 12 17 17 C 1.53777 * 113.61484 * 195.34234 * 4 2 1 18 18 C 1.53778 * 87.08262 * 270.80586 * 17 4 2 19 19 H 1.08995 * 113.62122 * 89.11476 * 18 17 4 20 20 O 1.42905 * 113.61240 * 219.93742 * 18 17 4 21 21 C 1.53781 * 87.08250 * 334.56781 * 18 17 4 22 22 H 0.96995 * 119.99774 * 174.99734 * 1 2 3 23 23 H 0.96992 * 119.99741 * 355.00063 * 1 2 3 24 24 H 0.96998 * 120.00382 * 354.98841 * 5 4 2 25 25 H 1.08999 * 109.32864 * 60.00011 * 8 6 5 26 26 H 1.09002 * 109.62254 * 289.55598 * 9 8 6 27 27 H 1.08997 * 109.62118 * 49.92255 * 9 8 6 28 28 H 1.09002 * 109.81599 * 58.59288 * 10 9 8 29 29 H 1.08996 * 109.82209 * 179.50710 * 10 9 8 30 30 H 0.97007 * 120.55859 * 223.68471 * 11 10 9 31 31 H 1.08001 * 119.07684 * 166.68370 * 12 11 10 32 32 H 1.08995 * 109.47082 * 240.16606 * 14 13 12 33 33 H 0.96695 * 114.00284 * 180.02562 * 15 14 13 34 34 H 1.48495 * 110.00021 * 298.67800 * 16 14 13 35 35 H 1.48500 * 110.00090 * 59.99849 * 16 14 13 36 36 H 1.09009 * 113.61093 * 25.35130 * 17 4 2 37 37 H 1.08991 * 113.61763 * 156.16936 * 17 4 2 38 38 H 0.96701 * 113.99562 * 179.97438 * 20 18 17 39 39 H 1.08999 * 113.61141 * 270.88934 * 21 18 17 40 40 H 1.08996 * 113.62150 * 139.98489 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1013 -1.3052 0.0006 5 7 1.4104 -2.3606 0.7453 6 6 1.9027 -3.6152 0.7498 7 8 2.8670 -3.8906 0.0675 8 6 1.2553 -4.6758 1.6023 9 6 1.9999 -5.9999 1.4160 10 6 1.4975 -6.9958 2.4712 11 7 1.7978 -6.4319 3.7954 12 6 1.5471 -5.0846 4.0237 13 6 1.3026 -4.2531 3.0429 14 6 1.0534 -2.8048 3.3770 15 8 2.0313 -1.9909 2.7263 16 14 1.1717 -2.5636 5.2205 17 6 3.5861 -1.1591 0.3733 18 6 3.8597 -0.9427 -1.1244 19 1 3.7958 0.1004 -1.4338 20 8 5.0478 -1.5873 -1.5881 21 6 2.5759 -1.7451 -1.3945 22 1 -0.4849 -0.8368 -0.0733 23 1 -0.4849 0.8368 0.0732 24 1 0.5963 -2.1575 1.2321 25 1 0.2165 -4.8000 1.2967 26 1 1.8033 -6.3931 0.4186 27 1 3.0705 -5.8386 1.5414 28 1 0.4219 -7.1360 2.3645 29 1 2.0092 -7.9507 2.3513 30 1 2.1652 -6.9910 4.4978 31 1 1.5569 -4.7134 5.0378 32 1 0.0582 -2.5194 3.0363 33 1 1.9321 -1.0443 2.8974 34 1 0.1389 -3.3804 5.9069 35 1 2.5241 -2.9493 5.6975 36 1 3.7981 -0.2834 0.9869 37 1 4.0281 -2.0722 0.7719 38 1 5.2251 -1.4551 -2.5295 39 1 2.7422 -2.8189 -1.4805 40 1 1.9724 -1.3427 -2.2081 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_15608500.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:40:58 Heat of formation + Delta-G solvation = -66.317576 kcal Electronic energy + Delta-G solvation = -26886.891643 eV Core-core repulsion = 23091.833401 eV Total energy + Delta-G solvation = -3795.058242 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.141 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.49126 -40.88620 -39.38300 -38.44727 -37.74225 -36.11670 -34.86521 -33.96621 -32.99689 -32.92414 -27.62138 -26.87579 -26.68455 -25.38768 -23.17196 -22.77980 -21.86379 -20.20443 -19.60432 -19.05007 -18.72662 -18.31262 -18.09047 -17.65140 -17.54710 -16.68139 -16.57699 -16.02299 -15.77807 -15.60748 -15.31728 -15.05798 -14.76137 -14.72586 -14.57831 -13.99437 -13.63250 -13.52065 -13.48249 -13.24422 -13.17727 -12.87237 -12.52853 -12.30815 -12.08219 -11.69292 -11.66476 -11.41387 -11.28957 -10.82726 -10.73594 -10.42583 -10.28327 -9.43689 -8.53279 -4.89503 1.10143 1.30228 1.40301 1.64045 1.85313 2.01209 2.16548 2.35461 2.52754 3.30213 3.46354 3.49047 3.59003 3.71876 3.74445 3.83286 3.94027 4.01026 4.18073 4.20149 4.24660 4.32171 4.52540 4.60267 4.61875 4.73663 4.77768 4.86958 4.99226 5.04947 5.12429 5.18827 5.24813 5.36044 5.57110 5.83771 6.20422 6.30418 6.66355 6.76416 6.87607 6.89988 7.19376 7.43076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.825 5.825 2 C 0.548 3.452 3 O -0.560 6.560 4 C 0.151 3.849 5 N -0.660 5.660 6 C 0.540 3.460 7 O -0.570 6.570 8 C -0.036 4.036 9 C -0.119 4.119 10 C 0.123 3.877 11 N -0.753 5.753 12 C 0.132 3.868 13 C -0.243 4.243 14 C -0.056 4.056 15 O -0.548 6.548 16 Si 0.746 3.254 17 C -0.101 4.101 18 C 0.073 3.927 19 H 0.087 0.913 20 O -0.575 6.575 21 C -0.168 4.168 22 H 0.416 0.584 23 H 0.417 0.583 24 H 0.412 0.588 25 H 0.121 0.879 26 H 0.085 0.915 27 H 0.047 0.953 28 H 0.076 0.924 29 H 0.096 0.904 30 H 0.408 0.592 31 H 0.116 0.884 32 H 0.102 0.898 33 H 0.382 0.618 34 H -0.288 1.288 35 H -0.315 1.315 36 H 0.076 0.924 37 H 0.081 0.919 38 H 0.391 0.609 39 H 0.116 0.884 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.780 -0.319 1.557 9.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.390 5.390 2 C 0.330 3.670 3 O -0.437 6.437 4 C 0.060 3.940 5 N -0.315 5.315 6 C 0.328 3.672 7 O -0.450 6.450 8 C -0.057 4.057 9 C -0.158 4.158 10 C -0.001 4.001 11 N -0.383 5.383 12 C 0.010 3.990 13 C -0.254 4.254 14 C -0.168 4.168 15 O -0.356 6.356 16 Si 0.656 3.344 17 C -0.140 4.140 18 C 0.014 3.986 19 H 0.105 0.895 20 O -0.382 6.382 21 C -0.207 4.207 22 H 0.247 0.753 23 H 0.250 0.750 24 H 0.252 0.748 25 H 0.138 0.862 26 H 0.104 0.896 27 H 0.066 0.934 28 H 0.094 0.906 29 H 0.114 0.886 30 H 0.244 0.756 31 H 0.133 0.867 32 H 0.119 0.881 33 H 0.231 0.769 34 H -0.216 1.216 35 H -0.244 1.244 36 H 0.094 0.906 37 H 0.099 0.901 38 H 0.240 0.760 39 H 0.133 0.867 40 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -8.281 -1.090 2.159 8.627 hybrid contribution -0.246 -0.449 -0.149 0.533 sum -8.527 -1.539 2.010 8.895 Atomic orbital electron populations 1.43649 1.05541 1.14754 1.75100 1.19596 0.83597 0.88625 0.75185 1.90812 1.69144 1.33204 1.50546 1.21117 0.92097 0.86272 0.94501 1.45368 1.28715 1.06753 1.50645 1.20435 0.83093 0.83218 0.80434 1.90648 1.28779 1.81923 1.43649 1.19735 1.01450 0.93116 0.91432 1.21667 0.99567 0.94466 1.00076 1.21730 1.00975 0.96433 0.80998 1.44635 1.71252 1.07399 1.15050 1.20237 0.96230 0.85807 0.96750 1.19862 1.18573 0.93909 0.93059 1.24371 0.95150 0.89106 1.08164 1.86959 1.54991 1.21813 1.71812 0.94530 0.75735 0.89324 0.74846 1.23048 0.93319 1.02431 0.95228 1.23255 0.84098 0.95113 0.96134 0.89519 1.86536 1.44043 1.76456 1.31178 1.24214 0.97244 1.04449 0.94814 0.75282 0.74957 0.74761 0.86176 0.89630 0.93423 0.90565 0.88559 0.75642 0.86716 0.88092 0.76854 1.21607 1.24374 0.90564 0.90063 0.76028 0.86651 0.90367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 8.77 8.60 -173.52 -1.49 7.28 16 2 C 0.55 -0.73 7.23 87.66 0.63 -0.09 16 3 O -0.56 -3.99 16.16 -3.04 -0.05 -4.04 16 4 C 0.15 0.12 1.34 3.39 0.00 0.12 16 5 N -0.66 2.16 2.62 -423.93 -1.11 1.05 16 6 C 0.54 1.84 5.71 87.65 0.50 2.34 16 7 O -0.57 -7.06 11.53 -3.05 -0.04 -7.10 16 8 C -0.04 0.02 2.74 -12.43 -0.03 -0.01 16 9 C -0.12 -0.18 4.91 30.79 0.15 -0.03 16 10 C 0.12 -0.36 7.16 86.46 0.62 0.26 16 11 N -0.75 0.49 5.83 -346.08 -2.02 -1.52 16 12 C 0.13 0.20 9.61 83.65 0.80 1.01 16 13 C -0.24 0.07 5.28 -16.52 -0.09 -0.02 16 14 C -0.06 0.31 1.84 71.24 0.13 0.44 16 15 O -0.55 1.87 6.94 -148.98 -1.03 0.84 16 16 Si 0.75 -2.74 29.66 68.60 2.03 -0.71 16 17 C -0.10 -0.81 5.69 31.12 0.18 -0.63 16 18 C 0.07 0.58 4.82 31.12 0.15 0.73 16 19 H 0.09 0.63 7.55 -2.39 -0.02 0.61 16 20 O -0.57 -6.14 13.67 -148.98 -2.04 -8.18 16 21 C -0.17 -0.77 6.78 31.12 0.21 -0.56 16 22 H 0.42 -6.51 7.97 -92.71 -0.74 -7.25 16 23 H 0.42 -5.22 8.93 -92.71 -0.83 -6.05 16 24 H 0.41 -4.13 5.22 -92.71 -0.48 -4.62 16 25 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 26 H 0.09 0.03 8.14 -2.39 -0.02 0.02 16 27 H 0.05 0.42 7.75 -2.39 -0.02 0.40 16 28 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 29 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 30 H 0.41 -1.43 8.96 -92.70 -0.83 -2.26 16 31 H 0.12 0.22 4.34 -2.91 -0.01 0.21 16 32 H 0.10 -1.34 7.09 -2.39 -0.02 -1.35 16 33 H 0.38 -3.74 8.74 -74.06 -0.65 -4.39 16 34 H -0.29 -0.32 7.11 99.48 0.71 0.39 16 35 H -0.31 -2.07 7.11 99.48 0.71 -1.37 16 36 H 0.08 0.62 7.68 -2.38 -0.02 0.60 16 37 H 0.08 1.20 6.57 -2.39 -0.02 1.19 16 38 H 0.39 0.62 9.12 -74.06 -0.68 -0.06 16 39 H 0.12 1.14 5.34 -2.39 -0.01 1.12 16 40 H 0.08 0.10 8.10 -2.39 -0.02 0.08 16 Total: 0.00 -27.79 308.27 -5.48 -33.27 By element: Atomic # 1 Polarization: -21.45 SS G_CDS: -3.00 Total: -24.45 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: 3.26 Total: 3.56 kcal Atomic # 7 Polarization: 11.43 SS G_CDS: -4.62 Total: 6.81 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: -3.16 Total: -18.47 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.03 Total: -0.71 kcal Total: -27.79 -5.48 -33.27 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_15608500.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.050 kcal (2) G-P(sol) polarization free energy of solvation -27.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.838 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds