Wall clock time and date at job start Sat Mar 6 2021 22:41:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34782 * 1 3 3 O 1.21278 * 119.99769 * 2 1 4 4 C 1.50700 * 119.99852 * 179.97438 * 2 1 3 5 5 N 1.46495 * 112.90643 * 25.18336 * 4 2 1 6 6 C 1.34775 * 120.00430 * 66.38803 * 5 4 2 7 7 O 1.21285 * 119.99855 * 4.99575 * 6 5 4 8 8 C 1.50703 * 119.99965 * 185.00270 * 6 5 4 9 9 O 1.42903 * 109.46853 * 179.97438 * 8 6 5 10 10 C 1.35902 * 116.99856 * 179.97438 * 9 8 6 11 11 C 1.38734 * 120.05487 * 359.72662 * 10 9 8 12 12 C 1.38143 * 119.93955 * 179.69890 * 11 10 9 13 13 C 1.38263 * 120.05740 * 0.60032 * 12 11 10 14 14 C 1.50705 * 119.94436 * 179.69876 * 13 12 11 15 15 O 1.42899 * 109.46838 * 119.97814 * 14 13 12 16 16 Si 1.86296 * 109.47079 * 359.97438 * 14 13 12 17 17 C 1.38269 * 120.11214 * 359.67420 * 13 12 11 18 18 C 1.38140 * 120.05209 * 0.02796 * 17 13 12 19 19 C 1.53956 * 113.61222 * 253.85415 * 4 2 1 20 20 C 1.53782 * 87.11124 * 270.84526 * 19 4 2 21 21 H 1.09003 * 113.61866 * 89.18862 * 20 19 4 22 22 O 1.42898 * 113.61462 * 220.09531 * 20 19 4 23 23 C 1.53778 * 113.60970 * 156.43152 * 4 2 1 24 24 H 0.97001 * 120.00070 * 175.01516 * 1 2 3 25 25 H 0.97001 * 120.00242 * 355.00430 * 1 2 3 26 26 H 0.97005 * 119.99840 * 246.38412 * 5 4 2 27 27 H 1.08997 * 109.46827 * 299.99637 * 8 6 5 28 28 H 1.08997 * 109.47277 * 59.99677 * 8 6 5 29 29 H 1.08000 * 120.02506 * 359.97438 * 11 10 9 30 30 H 1.07999 * 119.97070 * 180.27045 * 12 11 10 31 31 H 1.08998 * 109.46646 * 239.97357 * 14 13 12 32 32 H 0.96703 * 114.00251 * 180.02562 * 15 14 13 33 33 H 1.48500 * 110.00083 * 298.68063 * 16 14 13 34 34 H 1.48501 * 109.99943 * 59.99975 * 16 14 13 35 35 H 1.07997 * 119.97305 * 180.02562 * 17 13 12 36 36 H 1.08002 * 120.02826 * 179.97438 * 18 17 13 37 37 H 1.08993 * 113.53422 * 156.29689 * 19 4 2 38 38 H 1.08991 * 113.66885 * 25.41248 * 19 4 2 39 39 H 0.96704 * 113.99412 * 277.49204 * 22 20 19 40 40 H 1.08996 * 113.61730 * 334.56768 * 23 4 2 41 41 H 1.08998 * 113.61527 * 203.75142 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.3288 -2.4097 -0.5731 6 6 1.0096 -2.4003 -1.8825 7 8 1.4377 -1.5250 -2.6047 8 6 0.1206 -3.4772 -2.4492 9 8 -0.0704 -3.2504 -3.8471 10 6 -0.8528 -4.1385 -4.5149 11 6 -1.4203 -5.2095 -3.8398 12 6 -2.2203 -6.1073 -4.5197 13 6 -2.4456 -5.9463 -5.8743 14 6 -3.3132 -6.9312 -6.6149 15 8 -4.4301 -6.2466 -7.1859 16 14 -3.9225 -8.2346 -5.4314 17 6 -1.8765 -4.8830 -6.5506 18 6 -1.0808 -3.9790 -5.8740 19 6 2.7493 -1.6424 1.3558 20 6 3.9860 -0.8689 0.8689 21 1 3.9573 0.1946 1.1063 22 8 5.2245 -1.4855 1.2268 23 6 3.5277 -1.1930 -0.5629 24 1 -0.4850 -0.8369 -0.0730 25 1 -0.4850 0.8368 0.0732 26 1 1.0470 -3.1481 -0.0106 27 1 0.5881 -4.4504 -2.2991 28 1 -0.8443 -3.4556 -1.9427 29 1 -1.2404 -5.3385 -2.7827 30 1 -2.6659 -6.9387 -3.9937 31 1 -2.7323 -7.4029 -7.4074 32 1 -5.0331 -6.8202 -7.6784 33 1 -2.7715 -8.9750 -4.8549 34 1 -4.7159 -7.6041 -4.3460 35 1 -2.0543 -4.7592 -7.6086 36 1 -0.6361 -3.1488 -6.4027 37 1 2.9293 -2.7078 1.4990 38 1 2.2511 -1.1781 2.2067 39 1 5.5179 -1.2852 2.1262 40 1 3.6578 -0.3659 -1.2608 41 1 3.9216 -2.1349 -0.9447 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_2989410.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:07 Heat of formation + Delta-G solvation = -116.084658 kcal Electronic energy + Delta-G solvation = -27036.472785 eV Core-core repulsion = 22885.085537 eV Total energy + Delta-G solvation = -4151.387248 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.42426 -41.45397 -40.17388 -39.04767 -38.82948 -37.25124 -36.45366 -34.96399 -34.03976 -32.51477 -31.89474 -29.90028 -27.17536 -26.58910 -26.04453 -24.17352 -23.11076 -22.30946 -21.71019 -20.55301 -19.67847 -19.24646 -18.61054 -18.43366 -18.33747 -17.68835 -17.54301 -17.21261 -16.80914 -16.69698 -16.14224 -15.81661 -15.71070 -15.56096 -15.29667 -15.13113 -14.71090 -14.55469 -14.16585 -13.93752 -13.87851 -13.76062 -13.60455 -13.48094 -13.22389 -12.61982 -12.52096 -12.23924 -12.05841 -11.89334 -11.81278 -11.50236 -11.10921 -10.96128 -10.80097 -10.38609 -10.37295 -10.11408 -9.27674 -5.03283 0.20349 0.22704 1.11157 1.22739 1.23417 1.40541 1.56872 1.89695 2.24457 2.31355 2.56177 3.01472 3.12355 3.24736 3.35283 3.37874 3.54301 3.55562 3.68386 3.71797 3.72364 3.74402 3.88060 4.09493 4.16409 4.31677 4.35889 4.39584 4.48508 4.57054 4.69407 4.77215 4.85745 4.99717 5.07401 5.11751 5.15266 5.44117 5.58518 5.64403 5.97705 6.15065 6.20671 6.58350 6.60155 6.83691 7.09183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.540 3.460 3 O -0.524 6.524 4 C 0.128 3.872 5 N -0.718 5.718 6 C 0.512 3.488 7 O -0.490 6.490 8 C 0.040 3.960 9 O -0.286 6.286 10 C 0.133 3.867 11 C -0.204 4.204 12 C -0.083 4.083 13 C -0.111 4.111 14 C -0.067 4.067 15 O -0.546 6.546 16 Si 0.682 3.318 17 C -0.047 4.047 18 C -0.142 4.142 19 C -0.153 4.153 20 C 0.082 3.918 21 H 0.101 0.899 22 O -0.554 6.554 23 C -0.105 4.105 24 H 0.399 0.601 25 H 0.407 0.593 26 H 0.408 0.592 27 H 0.097 0.903 28 H 0.096 0.904 29 H 0.131 0.869 30 H 0.121 0.879 31 H 0.074 0.926 32 H 0.382 0.618 33 H -0.256 1.256 34 H -0.251 1.251 35 H 0.137 0.863 36 H 0.139 0.861 37 H 0.111 0.889 38 H 0.085 0.915 39 H 0.382 0.618 40 H 0.093 0.907 41 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.666 -7.519 3.385 9.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.409 5.409 2 C 0.322 3.678 3 O -0.399 6.399 4 C 0.038 3.962 5 N -0.376 5.376 6 C 0.296 3.704 7 O -0.361 6.361 8 C -0.039 4.039 9 O -0.199 6.199 10 C 0.088 3.912 11 C -0.223 4.223 12 C -0.101 4.101 13 C -0.111 4.111 14 C -0.178 4.178 15 O -0.353 6.353 16 Si 0.584 3.416 17 C -0.065 4.065 18 C -0.161 4.161 19 C -0.191 4.191 20 C 0.023 3.977 21 H 0.119 0.881 22 O -0.360 6.360 23 C -0.143 4.143 24 H 0.227 0.773 25 H 0.238 0.762 26 H 0.244 0.756 27 H 0.115 0.885 28 H 0.114 0.886 29 H 0.149 0.851 30 H 0.138 0.862 31 H 0.092 0.908 32 H 0.230 0.770 33 H -0.181 1.181 34 H -0.176 1.176 35 H 0.155 0.845 36 H 0.156 0.844 37 H 0.129 0.871 38 H 0.103 0.897 39 H 0.230 0.770 40 H 0.112 0.888 41 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -3.449 -6.097 3.261 7.727 hybrid contribution -0.444 -0.120 0.922 1.031 sum -3.893 -6.217 4.183 8.445 Atomic orbital electron populations 1.43699 1.07010 1.13209 1.76991 1.19904 0.82873 0.89926 0.75120 1.90792 1.68106 1.32160 1.48818 1.21610 0.91399 0.85264 0.97892 1.45777 1.57784 1.24600 1.09423 1.20187 0.81401 0.86647 0.82125 1.90850 1.50813 1.36642 1.57809 1.22450 1.00395 0.98621 0.82395 1.86178 1.65036 1.48491 1.20149 1.19021 0.91249 0.88858 0.92110 1.21094 1.03602 0.97032 1.00567 1.20640 0.97664 0.98266 0.93492 1.19283 1.00404 0.98092 0.93336 1.24616 0.89868 0.99976 1.03354 1.86493 1.36879 1.38503 1.73384 0.95269 0.84200 0.81473 0.80661 1.20857 0.93348 0.91929 1.00373 1.20553 1.02196 1.02007 0.91336 1.24017 0.97435 1.03642 0.94023 1.23241 0.82247 0.96573 0.95675 0.88148 1.86534 1.38626 1.74285 1.36520 1.23234 0.89803 1.04678 0.96619 0.77280 0.76173 0.75561 0.88501 0.88577 0.85087 0.86173 0.90766 0.77010 1.18072 1.17614 0.84482 0.84355 0.87100 0.89658 0.77003 0.88810 0.87948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.88 8.77 31.22 0.27 1.15 16 2 C 0.54 1.13 6.69 -10.98 -0.07 1.06 16 3 O -0.52 -3.17 16.08 5.56 0.09 -3.08 16 4 C 0.13 -0.03 1.12 -132.07 -0.15 -0.18 16 5 N -0.72 1.99 4.44 -47.84 -0.21 1.78 16 6 C 0.51 0.17 7.31 -10.99 -0.08 0.09 16 7 O -0.49 -2.75 15.55 -14.36 -0.22 -2.97 16 8 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 9 O -0.29 -0.73 9.67 -39.34 -0.38 -1.11 16 10 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 11 C -0.20 -0.15 9.04 -39.43 -0.36 -0.50 16 12 C -0.08 -0.13 8.66 -39.61 -0.34 -0.48 16 13 C -0.11 -0.21 5.42 -104.60 -0.57 -0.78 16 14 C -0.07 0.03 2.81 36.01 0.10 0.13 16 15 O -0.55 0.08 12.74 -35.23 -0.45 -0.37 16 16 Si 0.68 -1.08 29.78 -169.99 -5.06 -6.15 16 17 C -0.05 -0.09 9.60 -39.61 -0.38 -0.47 16 18 C -0.14 -0.33 9.99 -39.44 -0.39 -0.72 16 19 C -0.15 0.34 7.22 -25.83 -0.19 0.16 16 20 C 0.08 0.04 4.81 -25.92 -0.12 -0.09 16 21 H 0.10 0.12 7.32 -51.93 -0.38 -0.26 16 22 O -0.55 -0.32 13.67 -35.23 -0.48 -0.80 16 23 C -0.10 -0.22 6.15 -25.92 -0.16 -0.38 16 24 H 0.40 -1.41 7.88 -40.82 -0.32 -1.73 16 25 H 0.41 -0.66 8.93 -40.82 -0.36 -1.03 16 26 H 0.41 -2.69 8.71 -40.82 -0.36 -3.04 16 27 H 0.10 -0.40 7.65 -51.93 -0.40 -0.80 16 28 H 0.10 -0.45 7.68 -51.93 -0.40 -0.85 16 29 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 30 H 0.12 0.09 4.87 -52.49 -0.26 -0.17 16 31 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 32 H 0.38 -1.97 8.74 45.56 0.40 -1.57 16 33 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 34 H -0.25 -0.38 7.11 56.52 0.40 0.03 16 35 H 0.14 0.07 8.06 -52.49 -0.42 -0.36 16 36 H 0.14 0.21 8.06 -52.49 -0.42 -0.21 16 37 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.08 -0.27 8.10 -51.93 -0.42 -0.69 16 39 H 0.38 -1.41 9.12 45.56 0.42 -0.99 16 40 H 0.09 0.43 7.85 -51.93 -0.41 0.03 16 41 H 0.10 0.21 8.14 -51.93 -0.42 -0.21 16 LS Contribution 349.15 15.07 5.26 5.26 Total: 0.00 -13.87 349.15 -8.09 -21.96 By element: Atomic # 1 Polarization: -9.54 SS G_CDS: -4.12 Total: -13.66 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -2.79 Total: -2.01 kcal Atomic # 7 Polarization: 2.87 SS G_CDS: 0.06 Total: 2.93 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -1.44 Total: -8.34 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.06 Total: -6.15 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -13.87 -8.09 -21.96 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_2989410.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.124 kcal (2) G-P(sol) polarization free energy of solvation -13.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.091 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.961 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds