Wall clock time and date at job start Sat Mar 6 2021 22:41:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34789 * 1 3 3 O 1.21277 * 120.00165 * 2 1 4 4 C 1.50702 * 119.99605 * 180.28342 * 2 1 3 5 5 N 1.46500 * 112.85385 * 46.05352 * 4 2 1 6 6 C 1.34773 * 119.99824 * 57.49118 * 5 4 2 7 7 O 1.21280 * 120.00153 * 354.88914 * 6 5 4 8 8 C 1.50707 * 119.99763 * 174.88752 * 6 5 4 9 9 C 1.53001 * 109.46832 * 180.02562 * 8 6 5 10 10 O 1.42899 * 109.47063 * 179.97438 * 9 8 6 11 11 C 1.35899 * 117.00490 * 180.02562 * 10 9 8 12 12 C 1.38729 * 120.05244 * 359.72315 * 11 10 9 13 13 C 1.38148 * 119.94493 * 179.70209 * 12 11 10 14 14 C 1.38270 * 120.05224 * 0.60019 * 13 12 11 15 15 C 1.50700 * 119.94352 * 179.70212 * 14 13 12 16 16 O 1.42901 * 109.47036 * 119.97421 * 15 14 13 17 17 Si 1.86298 * 109.46996 * 359.97438 * 15 14 13 18 18 C 1.38262 * 120.10970 * 359.67871 * 14 13 12 19 19 C 1.38143 * 120.05725 * 0.02562 * 18 14 13 20 20 C 1.53777 * 113.61029 * 274.85621 * 4 2 1 21 21 C 1.53787 * 87.08166 * 270.88746 * 20 4 2 22 22 H 1.08995 * 113.61448 * 89.11762 * 21 20 4 23 23 O 1.42906 * 113.61379 * 219.93770 * 21 20 4 24 24 C 1.53778 * 113.60899 * 177.36035 * 4 2 1 25 25 H 0.96996 * 119.99775 * 354.99342 * 1 2 3 26 26 H 0.96991 * 120.00017 * 174.99918 * 1 2 3 27 27 H 0.96994 * 119.99730 * 237.49960 * 5 4 2 28 28 H 1.08996 * 109.46922 * 299.99798 * 8 6 5 29 29 H 1.08994 * 109.47164 * 60.00434 * 8 6 5 30 30 H 1.09003 * 109.47440 * 299.99752 * 9 8 6 31 31 H 1.09004 * 109.47342 * 60.00039 * 9 8 6 32 32 H 1.08006 * 120.02854 * 359.97438 * 12 11 10 33 33 H 1.08003 * 119.97369 * 180.27290 * 13 12 11 34 34 H 1.08994 * 109.46944 * 239.97455 * 15 14 13 35 35 H 0.96699 * 113.99753 * 179.97438 * 16 15 14 36 36 H 1.48499 * 110.00012 * 298.67930 * 17 15 14 37 37 H 1.48498 * 110.00313 * 60.00147 * 17 15 14 38 38 H 1.08006 * 119.96890 * 180.02562 * 18 14 13 39 39 H 1.08006 * 120.02579 * 180.02562 * 19 18 14 40 40 H 1.08992 * 113.61721 * 25.43396 * 20 4 2 41 41 H 1.09000 * 113.61663 * 156.34100 * 20 4 2 42 42 H 0.96699 * 113.99349 * 179.97438 * 23 21 20 43 43 H 1.09007 * 113.61052 * 203.66088 * 24 4 2 44 44 H 1.08997 * 113.62155 * 334.56159 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3479 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1013 -1.3052 -0.0065 5 7 1.5744 -2.2615 -0.9832 6 6 1.5104 -1.9267 -2.2871 7 8 1.8012 -0.8034 -2.6398 8 6 1.0774 -2.9484 -3.3069 9 6 1.0916 -2.3160 -4.7000 10 8 0.6816 -3.2848 -5.6672 11 6 0.6399 -2.8823 -6.9645 12 6 0.9809 -1.5798 -7.2991 13 6 0.9436 -1.1748 -8.6193 14 6 0.5549 -2.0627 -9.6054 15 6 0.5086 -1.6163 -11.0440 16 8 1.3977 -2.4209 -11.8212 17 14 1.0277 0.1694 -11.1570 18 6 0.2090 -3.3596 -9.2737 19 6 0.2505 -3.7713 -7.9557 20 6 2.3059 -1.9051 1.3946 21 6 3.6091 -1.0918 1.4666 22 1 3.4764 -0.0896 1.8739 23 8 4.6923 -1.7988 2.0742 24 6 3.6282 -1.1345 -0.0705 25 1 -0.4849 0.8368 0.0733 26 1 -0.4850 -0.8368 -0.0732 27 1 1.2715 -3.1355 -0.6914 28 1 1.7627 -3.7957 -3.2859 29 1 0.0692 -3.2904 -3.0731 30 1 0.4066 -1.4684 -4.7214 31 1 2.1000 -1.9741 -4.9337 32 1 1.2795 -0.8844 -6.5286 33 1 1.2133 -0.1622 -8.8809 34 1 -0.5066 -1.7244 -11.4254 35 1 1.4191 -2.1892 -12.7598 36 1 0.0922 1.0205 -10.3788 37 1 2.4104 0.3301 -10.6399 38 1 -0.0940 -4.0515 -10.0458 39 1 -0.0194 -4.7846 -7.6972 40 1 1.5543 -1.5904 2.1184 41 1 2.4641 -2.9836 1.3889 42 1 5.5147 -1.2925 2.1220 43 1 4.1479 -2.0024 -0.4768 44 1 3.9442 -0.1977 -0.5294 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549602.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:09 Heat of formation + Delta-G solvation = -139.403480 kcal Electronic energy + Delta-G solvation = -28697.556202 eV Core-core repulsion = 24389.620155 eV Total energy + Delta-G solvation = -4307.936047 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.39497 -41.43807 -40.32712 -39.18124 -39.04187 -37.26610 -36.51589 -34.85969 -34.25662 -33.27705 -32.18547 -31.59652 -27.29617 -27.08226 -26.29865 -25.38343 -23.81151 -23.03469 -22.16835 -21.42499 -20.51311 -19.68388 -19.23782 -18.41474 -18.37542 -18.09590 -17.81102 -17.57282 -17.34280 -16.86277 -16.77511 -16.12236 -15.99724 -15.90404 -15.58400 -15.48138 -15.16156 -14.88843 -14.80273 -14.54283 -14.14907 -13.97896 -13.81470 -13.68857 -13.60281 -13.41335 -13.07089 -12.89355 -12.56537 -12.52247 -12.06858 -11.99134 -11.93210 -11.82640 -11.51164 -11.28974 -10.93798 -10.84942 -10.34218 -10.32934 -10.20582 -9.33766 -5.00018 0.09177 0.14867 1.19663 1.28115 1.33410 1.58466 1.59215 1.94039 2.26545 2.27241 2.48562 3.10432 3.17558 3.29072 3.35012 3.45688 3.56271 3.62531 3.67810 3.73032 3.79247 3.88103 3.92519 4.06837 4.09681 4.20712 4.32757 4.42250 4.51007 4.54844 4.59097 4.60232 4.67735 4.71763 4.78829 4.79690 4.87197 5.03437 5.09675 5.16789 5.34234 5.56395 5.69297 6.15538 6.19793 6.31920 6.71569 6.91564 7.00059 7.11742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.831 5.831 2 C 0.535 3.465 3 O -0.577 6.577 4 C 0.130 3.870 5 N -0.693 5.693 6 C 0.518 3.482 7 O -0.570 6.570 8 C -0.127 4.127 9 C 0.070 3.930 10 O -0.313 6.313 11 C 0.125 3.875 12 C -0.212 4.212 13 C -0.105 4.105 14 C -0.129 4.129 15 C -0.068 4.068 16 O -0.563 6.563 17 Si 0.768 3.232 18 C -0.054 4.054 19 C -0.150 4.150 20 C -0.100 4.100 21 C 0.080 3.920 22 H 0.081 0.919 23 O -0.565 6.565 24 C -0.158 4.158 25 H 0.408 0.592 26 H 0.415 0.585 27 H 0.431 0.569 28 H 0.132 0.868 29 H 0.139 0.861 30 H 0.063 0.937 31 H 0.057 0.943 32 H 0.132 0.868 33 H 0.114 0.886 34 H 0.099 0.901 35 H 0.404 0.596 36 H -0.293 1.293 37 H -0.304 1.304 38 H 0.155 0.845 39 H 0.155 0.845 40 H 0.103 0.897 41 H 0.134 0.866 42 H 0.398 0.602 43 H 0.107 0.893 44 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.119 -6.179 -0.168 8.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.318 3.682 3 O -0.455 6.455 4 C 0.040 3.960 5 N -0.350 5.350 6 C 0.305 3.695 7 O -0.448 6.448 8 C -0.166 4.166 9 C -0.005 4.005 10 O -0.227 6.227 11 C 0.080 3.920 12 C -0.231 4.231 13 C -0.122 4.122 14 C -0.129 4.129 15 C -0.178 4.178 16 O -0.373 6.373 17 Si 0.676 3.324 18 C -0.071 4.071 19 C -0.169 4.169 20 C -0.138 4.138 21 C 0.021 3.979 22 H 0.099 0.901 23 O -0.373 6.373 24 C -0.197 4.197 25 H 0.240 0.760 26 H 0.246 0.754 27 H 0.271 0.729 28 H 0.150 0.850 29 H 0.157 0.843 30 H 0.081 0.919 31 H 0.076 0.924 32 H 0.150 0.850 33 H 0.131 0.869 34 H 0.117 0.883 35 H 0.255 0.745 36 H -0.220 1.220 37 H -0.232 1.232 38 H 0.172 0.828 39 H 0.173 0.827 40 H 0.121 0.879 41 H 0.152 0.848 42 H 0.248 0.752 43 H 0.125 0.875 44 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -4.508 -5.047 0.724 6.806 hybrid contribution 0.042 0.569 0.427 0.713 sum -4.466 -4.478 1.151 6.428 Atomic orbital electron populations 1.43591 1.06065 1.14210 1.75582 1.20266 0.83580 0.90086 0.74251 1.90746 1.69312 1.34408 1.51035 1.21356 0.94043 0.88166 0.92473 1.45662 1.65399 1.18874 1.05085 1.20869 0.76304 0.88492 0.83809 1.90835 1.49703 1.23684 1.80605 1.21425 1.07669 0.98211 0.89316 1.22463 1.00147 0.90702 0.87228 1.85952 1.83012 1.40148 1.13558 1.19112 0.96061 0.92659 0.84199 1.21302 1.07862 0.96463 0.97481 1.20800 0.99255 0.98817 0.93351 1.19652 1.03479 0.95368 0.94441 1.24639 0.97918 1.06246 0.89024 1.86437 1.64753 1.60549 1.25553 0.94621 0.75841 0.73566 0.88341 1.21090 0.95482 0.94883 0.95683 1.20805 1.04328 1.00737 0.90982 1.23341 0.96072 1.03077 0.91296 1.23071 0.88490 0.95644 0.90741 0.90097 1.86433 1.23230 1.45293 1.82388 1.23947 0.93715 1.03304 0.98737 0.75998 0.75361 0.72866 0.84958 0.84266 0.91916 0.92449 0.84985 0.86892 0.88303 0.74501 1.22035 1.23226 0.82781 0.82701 0.87862 0.84823 0.75207 0.87464 0.92430 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 1.98 8.85 -173.52 -1.53 0.45 16 2 C 0.54 2.85 5.67 87.66 0.50 3.35 16 3 O -0.58 -9.11 16.49 -3.02 -0.05 -9.16 16 4 C 0.13 -0.12 1.04 3.38 0.00 -0.12 16 5 N -0.69 4.63 5.05 -423.93 -2.14 2.49 16 6 C 0.52 -0.36 7.55 87.66 0.66 0.31 16 7 O -0.57 -6.01 14.93 -3.03 -0.05 -6.05 16 8 C -0.13 0.76 6.07 29.85 0.18 0.94 16 9 C 0.07 0.12 4.03 71.98 0.29 0.41 16 10 O -0.31 -1.28 10.14 -92.41 -0.94 -2.21 16 11 C 0.13 0.86 6.69 22.50 0.15 1.01 16 12 C -0.21 -1.83 9.04 22.37 0.20 -1.63 16 13 C -0.10 -0.96 8.66 22.26 0.19 -0.76 16 14 C -0.13 -0.85 5.42 -19.85 -0.11 -0.95 16 15 C -0.07 -0.04 2.81 71.24 0.20 0.16 16 16 O -0.56 -0.18 12.74 -148.98 -1.90 -2.08 16 17 Si 0.77 0.33 29.78 68.60 2.04 2.38 16 18 C -0.05 -0.23 9.60 22.25 0.21 -0.02 16 19 C -0.15 -0.67 9.99 22.36 0.22 -0.45 16 20 C -0.10 0.54 7.19 31.12 0.22 0.77 16 21 C 0.08 0.03 4.85 31.12 0.15 0.18 16 22 H 0.08 0.21 7.97 -2.39 -0.02 0.20 16 23 O -0.57 -0.07 13.67 -148.98 -2.04 -2.11 16 24 C -0.16 -0.48 6.93 31.12 0.22 -0.27 16 25 H 0.41 -1.17 8.93 -92.71 -0.83 -2.00 16 26 H 0.42 -3.78 8.63 -92.71 -0.80 -4.58 16 27 H 0.43 -6.49 8.67 -92.71 -0.80 -7.29 16 28 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 29 H 0.14 -1.62 8.14 -2.39 -0.02 -1.64 16 30 H 0.06 0.22 7.61 -2.39 -0.02 0.21 16 31 H 0.06 0.27 7.63 -2.39 -0.02 0.26 16 32 H 0.13 1.00 6.30 -2.91 -0.02 0.98 16 33 H 0.11 1.03 4.87 -2.91 -0.01 1.01 16 34 H 0.10 -0.41 7.96 -2.39 -0.02 -0.43 16 35 H 0.40 -4.18 8.74 -74.06 -0.65 -4.83 16 36 H -0.29 -1.84 7.11 99.48 0.71 -1.13 16 37 H -0.30 -2.74 7.11 99.48 0.71 -2.04 16 38 H 0.15 0.01 8.06 -2.91 -0.02 -0.01 16 39 H 0.16 -0.01 8.06 -2.91 -0.02 -0.03 16 40 H 0.10 -0.80 8.09 -2.39 -0.02 -0.82 16 41 H 0.13 -1.25 8.14 -2.39 -0.02 -1.27 16 42 H 0.40 -2.49 9.12 -74.06 -0.68 -3.16 16 43 H 0.11 0.14 8.14 -2.38 -0.02 0.12 16 44 H 0.06 0.59 7.46 -2.39 -0.02 0.58 16 Total: 0.00 -34.65 372.08 -5.91 -40.56 By element: Atomic # 1 Polarization: -24.57 SS G_CDS: -2.61 Total: -27.18 kcal Atomic # 6 Polarization: -0.38 SS G_CDS: 3.30 Total: 2.92 kcal Atomic # 7 Polarization: 6.62 SS G_CDS: -3.67 Total: 2.94 kcal Atomic # 8 Polarization: -16.65 SS G_CDS: -4.97 Total: -21.62 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: 2.04 Total: 2.38 kcal Total: -34.65 -5.91 -40.56 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549602.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.843 kcal (2) G-P(sol) polarization free energy of solvation -34.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.495 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.908 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds