Wall clock time and date at job start Sat Mar 6 2021 22:41:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34766 * 1 3 3 O 1.21288 * 120.00367 * 2 1 4 4 C 1.50697 * 120.00299 * 180.02562 * 2 1 3 5 5 N 1.46501 * 112.84893 * 324.14626 * 4 2 1 6 6 C 1.34770 * 119.99661 * 293.73416 * 5 4 2 7 7 O 1.21277 * 120.00347 * 354.77837 * 6 5 4 8 8 C 1.50708 * 119.99837 * 175.05110 * 6 5 4 9 9 C 1.52995 * 109.46934 * 180.02562 * 8 6 5 10 10 O 1.42905 * 109.46950 * 179.97438 * 9 8 6 11 11 C 1.35901 * 117.00316 * 179.97438 * 10 9 8 12 12 C 1.38709 * 120.05893 * 180.02562 * 11 10 9 13 13 C 1.38164 * 119.94328 * 180.02562 * 12 11 10 14 14 C 1.50701 * 119.97085 * 180.02562 * 13 12 11 15 15 O 1.42905 * 109.46907 * 299.99995 * 14 13 12 16 16 Si 1.86293 * 109.47369 * 179.97438 * 14 13 12 17 17 C 1.38237 * 120.05671 * 359.97438 * 13 12 11 18 18 C 1.38284 * 120.11241 * 0.02732 * 17 13 12 19 19 C 1.38124 * 120.05759 * 359.67377 * 18 17 13 20 20 C 1.53786 * 113.61827 * 192.94775 * 4 2 1 21 21 C 1.53779 * 87.07903 * 270.80154 * 20 4 2 22 22 H 1.09003 * 113.61576 * 89.20131 * 21 20 4 23 23 O 1.42907 * 113.61199 * 220.01742 * 21 20 4 24 24 C 1.53776 * 87.08417 * 334.56588 * 21 20 4 25 25 H 0.97000 * 120.00097 * 174.97439 * 1 2 3 26 26 H 0.97003 * 120.00169 * 354.98175 * 1 2 3 27 27 H 0.96995 * 119.99947 * 113.73680 * 5 4 2 28 28 H 1.08997 * 109.47275 * 300.00373 * 8 6 5 29 29 H 1.09001 * 109.47053 * 60.00085 * 8 6 5 30 30 H 1.08999 * 109.47084 * 299.99413 * 9 8 6 31 31 H 1.08996 * 109.47295 * 60.00525 * 9 8 6 32 32 H 1.08003 * 120.02262 * 359.97438 * 12 11 10 33 33 H 1.09006 * 109.47373 * 59.99557 * 14 13 12 34 34 H 0.96705 * 113.99812 * 180.02562 * 15 14 13 35 35 H 1.48509 * 109.99958 * 298.67984 * 16 14 13 36 36 H 1.48501 * 109.99940 * 59.99889 * 16 14 13 37 37 H 1.08006 * 119.94334 * 180.02562 * 17 13 12 38 38 H 1.08004 * 119.97214 * 179.97438 * 18 17 13 39 39 H 1.07997 * 120.03115 * 180.32386 * 19 18 17 40 40 H 1.08995 * 113.60948 * 25.34651 * 20 4 2 41 41 H 1.08994 * 113.61580 * 156.16665 * 20 4 2 42 42 H 0.96696 * 113.99911 * 180.02562 * 23 21 20 43 43 H 1.09003 * 113.61352 * 270.88570 * 24 21 20 44 44 H 1.08999 * 113.61577 * 139.98369 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3050 -0.0006 5 7 1.4381 -2.3452 0.7897 6 6 1.3305 -2.2101 2.1263 7 8 1.8643 -1.2761 2.6863 8 6 0.5521 -3.2231 2.9258 9 6 0.5853 -2.8388 4.4063 10 8 -0.1533 -3.7990 5.1644 11 6 -0.2226 -3.6037 6.5075 12 6 -0.9228 -4.4974 7.3043 13 6 -0.9922 -4.2962 8.6695 14 6 -1.7523 -5.2671 9.5359 15 8 -3.1196 -5.3051 9.1222 16 14 -1.6558 -4.7200 11.3140 17 6 -0.3640 -3.2057 9.2414 18 6 0.3347 -2.3133 8.4492 19 6 0.4122 -2.5132 7.0848 20 6 3.5985 -1.1521 0.3152 21 6 3.8176 -0.9659 -1.1955 22 1 3.7436 0.0711 -1.5229 23 8 4.9874 -1.6216 -1.6893 24 6 2.5252 -1.7731 -1.4028 25 1 -0.4850 -0.8368 -0.0736 26 1 -0.4850 0.8368 0.0735 27 1 1.0765 -3.1311 0.3510 28 1 -0.4811 -3.2433 2.5792 29 1 0.9982 -4.2091 2.7958 30 1 1.6185 -2.8184 4.7533 31 1 0.1389 -1.8529 4.5360 32 1 -1.4141 -5.3493 6.8578 33 1 -1.3153 -6.2609 9.4377 34 1 -3.6698 -5.9107 9.6377 35 1 -0.2411 -4.7074 11.7655 36 1 -2.2481 -3.3662 11.4617 37 1 -0.4191 -3.0505 10.3089 38 1 0.8243 -1.4618 8.8984 39 1 0.9624 -1.8188 6.4671 40 1 3.8322 -0.2644 0.9029 41 1 4.0550 -2.0572 0.7157 42 1 5.1308 -1.5078 -2.6388 43 1 2.6887 -2.8485 -1.4733 44 1 1.8926 -1.3868 -2.2019 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549614.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:12 Heat of formation + Delta-G solvation = -138.709776 kcal Electronic energy + Delta-G solvation = -28702.810003 eV Core-core repulsion = 24394.904037 eV Total energy + Delta-G solvation = -4307.905965 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.39105 -41.43059 -40.33034 -39.16324 -38.99754 -37.34098 -36.50412 -34.93495 -34.18719 -33.11219 -32.70679 -30.97029 -27.37182 -27.10004 -26.69072 -25.11599 -23.84353 -23.08152 -22.07747 -21.42951 -20.50907 -19.29628 -19.19406 -18.44840 -18.40019 -18.07051 -17.77923 -17.54579 -17.44435 -17.21128 -16.78836 -16.12089 -16.03183 -15.92111 -15.66447 -15.38370 -15.08139 -14.68803 -14.65606 -14.56369 -14.26424 -14.10974 -13.78807 -13.59291 -13.48447 -13.34468 -13.03504 -12.88909 -12.63401 -12.42541 -12.18130 -11.91989 -11.86388 -11.82453 -11.58799 -11.12484 -11.00029 -10.84259 -10.43960 -10.34050 -9.98924 -9.43562 -4.94667 0.03930 0.20154 1.18841 1.27879 1.38051 1.56632 1.64480 1.97731 2.27028 2.27894 2.48156 3.07423 3.19822 3.35197 3.40273 3.46928 3.57036 3.65508 3.73311 3.78309 3.80910 3.83272 3.94453 4.11324 4.12784 4.15395 4.30530 4.37825 4.51791 4.53689 4.58654 4.62485 4.69092 4.74189 4.81853 4.82555 4.91547 5.07257 5.18222 5.19134 5.26439 5.51219 5.67614 6.18100 6.21124 6.33610 6.80356 6.90587 7.02896 7.10705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.829 5.829 2 C 0.531 3.469 3 O -0.576 6.576 4 C 0.131 3.869 5 N -0.695 5.695 6 C 0.519 3.481 7 O -0.570 6.570 8 C -0.128 4.128 9 C 0.070 3.930 10 O -0.315 6.315 11 C 0.125 3.875 12 C -0.134 4.134 13 C -0.051 4.051 14 C -0.081 4.081 15 O -0.563 6.563 16 Si 0.782 3.218 17 C -0.181 4.181 18 C -0.078 4.078 19 C -0.212 4.212 20 C -0.116 4.116 21 C 0.079 3.921 22 H 0.083 0.917 23 O -0.570 6.570 24 C -0.130 4.130 25 H 0.417 0.583 26 H 0.409 0.591 27 H 0.430 0.570 28 H 0.137 0.863 29 H 0.133 0.867 30 H 0.063 0.937 31 H 0.062 0.938 32 H 0.143 0.857 33 H 0.099 0.901 34 H 0.405 0.595 35 H -0.288 1.288 36 H -0.299 1.299 37 H 0.120 0.880 38 H 0.146 0.854 39 H 0.140 0.860 40 H 0.055 0.945 41 H 0.098 0.902 42 H 0.399 0.601 43 H 0.134 0.866 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.662 -8.647 -3.501 10.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.313 3.687 3 O -0.455 6.455 4 C 0.041 3.959 5 N -0.352 5.352 6 C 0.307 3.693 7 O -0.447 6.447 8 C -0.168 4.168 9 C -0.006 4.006 10 O -0.229 6.229 11 C 0.080 3.920 12 C -0.152 4.152 13 C -0.052 4.052 14 C -0.190 4.190 15 O -0.373 6.373 16 Si 0.688 3.312 17 C -0.199 4.199 18 C -0.096 4.096 19 C -0.230 4.230 20 C -0.155 4.155 21 C 0.019 3.981 22 H 0.101 0.899 23 O -0.378 6.378 24 C -0.168 4.168 25 H 0.248 0.752 26 H 0.241 0.759 27 H 0.271 0.729 28 H 0.155 0.845 29 H 0.151 0.849 30 H 0.081 0.919 31 H 0.081 0.919 32 H 0.160 0.840 33 H 0.117 0.883 34 H 0.257 0.743 35 H -0.216 1.216 36 H -0.227 1.227 37 H 0.138 0.862 38 H 0.164 0.836 39 H 0.158 0.842 40 H 0.074 0.926 41 H 0.117 0.883 42 H 0.250 0.750 43 H 0.152 0.848 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -4.289 -6.737 -2.501 8.369 hybrid contribution -0.044 0.647 -0.977 1.172 sum -4.333 -6.090 -3.478 8.244 Atomic orbital electron populations 1.43604 1.05981 1.14364 1.75338 1.20363 0.83697 0.90087 0.74504 1.90769 1.69325 1.34285 1.51074 1.21318 0.91885 0.86721 0.96019 1.45643 1.59972 1.23580 1.05979 1.20841 0.79718 0.85994 0.82772 1.90816 1.47762 1.35228 1.70943 1.21435 1.04189 0.99990 0.91140 1.22488 0.95897 0.91176 0.90995 1.85952 1.70627 1.50786 1.15561 1.19104 0.95473 0.94427 0.83010 1.20375 1.01759 1.00968 0.92131 1.19535 0.96645 0.95246 0.93728 1.24874 0.84702 1.01391 1.08046 1.86443 1.18340 1.69412 1.63082 0.94441 0.79843 0.81186 0.75701 1.20972 1.02884 0.96556 0.99467 1.21144 0.96677 0.98738 0.93016 1.21513 1.05134 0.99746 0.96636 1.23206 0.92791 1.03033 0.96479 1.23128 0.85044 0.95761 0.94191 0.89913 1.86490 1.44765 1.75861 1.30727 1.23918 0.96722 1.03997 0.92175 0.75171 0.75912 0.72897 0.84505 0.84860 0.91863 0.91933 0.83960 0.88324 0.74345 1.21602 1.22717 0.86233 0.83587 0.84214 0.92566 0.88314 0.74992 0.84786 0.87854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.29 8.78 -173.54 -1.52 1.77 16 2 C 0.53 2.19 6.60 87.66 0.58 2.77 16 3 O -0.58 -8.30 16.20 -3.06 -0.05 -8.35 16 4 C 0.13 -0.16 1.05 3.38 0.00 -0.15 16 5 N -0.69 5.03 4.78 -423.92 -2.03 3.01 16 6 C 0.52 -0.68 7.48 87.66 0.66 -0.02 16 7 O -0.57 -5.52 15.02 -3.02 -0.05 -5.56 16 8 C -0.13 0.84 6.07 29.85 0.18 1.02 16 9 C 0.07 0.07 4.03 71.98 0.29 0.36 16 10 O -0.32 -1.36 10.14 -92.44 -0.94 -2.30 16 11 C 0.13 0.91 6.69 22.51 0.15 1.06 16 12 C -0.13 -0.96 9.55 22.36 0.21 -0.74 16 13 C -0.05 -0.35 5.42 -19.88 -0.11 -0.46 16 14 C -0.08 -0.03 2.81 71.24 0.20 0.17 16 15 O -0.56 -0.13 12.74 -148.98 -1.90 -2.03 16 16 Si 0.78 -0.99 29.79 68.60 2.04 1.05 16 17 C -0.18 -1.38 8.67 22.28 0.19 -1.18 16 18 C -0.08 -0.50 10.04 22.25 0.22 -0.28 16 19 C -0.21 -1.42 9.04 22.37 0.20 -1.22 16 20 C -0.12 -0.63 6.15 31.12 0.19 -0.43 16 21 C 0.08 0.09 4.82 31.12 0.15 0.24 16 22 H 0.08 0.30 7.62 -2.39 -0.02 0.28 16 23 O -0.57 -0.57 13.67 -148.98 -2.04 -2.61 16 24 C -0.13 0.86 7.21 31.12 0.22 1.08 16 25 H 0.42 -4.59 8.47 -92.71 -0.78 -5.38 16 26 H 0.41 -1.74 8.93 -92.71 -0.83 -2.57 16 27 H 0.43 -6.80 8.71 -92.71 -0.81 -7.61 16 28 H 0.14 -1.59 8.14 -2.39 -0.02 -1.61 16 29 H 0.13 -1.42 8.14 -2.39 -0.02 -1.44 16 30 H 0.06 0.19 7.60 -2.39 -0.02 0.17 16 31 H 0.06 0.19 7.64 -2.39 -0.02 0.17 16 32 H 0.14 0.71 8.06 -2.91 -0.02 0.68 16 33 H 0.10 -0.40 7.96 -2.38 -0.02 -0.42 16 34 H 0.41 -4.38 8.74 -74.05 -0.65 -5.03 16 35 H -0.29 -1.20 7.11 99.48 0.71 -0.49 16 36 H -0.30 -2.00 7.11 99.48 0.71 -1.29 16 37 H 0.12 0.77 4.87 -2.91 -0.01 0.75 16 38 H 0.15 0.30 8.06 -2.91 -0.02 0.28 16 39 H 0.14 0.65 6.30 -2.91 -0.02 0.63 16 40 H 0.06 0.73 7.64 -2.39 -0.02 0.71 16 41 H 0.10 0.51 8.14 -2.39 -0.02 0.50 16 42 H 0.40 -3.18 9.12 -74.06 -0.68 -3.86 16 43 H 0.13 -1.43 8.14 -2.39 -0.02 -1.45 16 44 H 0.10 -0.99 8.10 -2.39 -0.02 -1.01 16 Total: 0.00 -35.07 371.36 -5.72 -40.79 By element: Atomic # 1 Polarization: -25.38 SS G_CDS: -2.60 Total: -27.98 kcal Atomic # 6 Polarization: -1.14 SS G_CDS: 3.35 Total: 2.21 kcal Atomic # 7 Polarization: 8.32 SS G_CDS: -3.55 Total: 4.77 kcal Atomic # 8 Polarization: -15.88 SS G_CDS: -4.97 Total: -20.85 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: 2.04 Total: 1.05 kcal Total: -35.07 -5.72 -40.79 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549614.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.924 kcal (2) G-P(sol) polarization free energy of solvation -35.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.786 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds