Wall clock time and date at job start Sat Mar 6 2021 22:41:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21288 * 119.99746 * 2 1 4 4 C 1.50697 * 120.00524 * 180.02562 * 2 1 3 5 5 N 1.46500 * 112.84711 * 323.89808 * 4 2 1 6 6 C 1.34780 * 119.99944 * 293.72410 * 5 4 2 7 7 O 1.21274 * 119.99751 * 354.99325 * 6 5 4 8 8 C 1.50700 * 119.99800 * 174.99151 * 6 5 4 9 9 C 1.53003 * 109.46792 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.47056 * 180.02562 * 9 8 6 11 11 O 1.42900 * 109.47399 * 179.97438 * 10 9 8 12 12 C 1.35899 * 117.00129 * 179.97438 * 11 10 9 13 13 C 1.38714 * 120.05302 * 179.72095 * 12 11 10 14 14 C 1.38171 * 119.94192 * 179.72194 * 13 12 11 15 15 C 1.50692 * 119.97092 * 180.27923 * 14 13 12 16 16 O 1.42898 * 109.47633 * 300.29900 * 15 14 13 17 17 Si 1.86300 * 109.46947 * 180.30155 * 15 14 13 18 18 C 1.38247 * 120.05248 * 0.57819 * 14 13 12 19 19 C 1.38287 * 120.11063 * 359.68168 * 18 14 13 20 20 C 1.38120 * 120.05848 * 0.03948 * 19 18 14 21 21 C 1.53773 * 113.61621 * 192.69770 * 4 2 1 22 22 C 1.53779 * 87.08390 * 270.80082 * 21 4 2 23 23 H 1.08996 * 113.61319 * 89.20369 * 22 21 4 24 24 O 1.42904 * 113.61280 * 220.01886 * 22 21 4 25 25 C 1.53779 * 87.07870 * 334.56727 * 22 21 4 26 26 H 0.97001 * 119.99727 * 174.98670 * 1 2 3 27 27 H 0.97002 * 120.00498 * 354.97924 * 1 2 3 28 28 H 0.97003 * 120.00266 * 113.72533 * 5 4 2 29 29 H 1.08998 * 109.47025 * 60.00589 * 8 6 5 30 30 H 1.08995 * 109.47311 * 299.99778 * 8 6 5 31 31 H 1.08990 * 109.47281 * 60.00061 * 9 8 6 32 32 H 1.08995 * 109.46763 * 299.99810 * 9 8 6 33 33 H 1.08998 * 109.47433 * 59.99091 * 10 9 8 34 34 H 1.09011 * 109.46833 * 299.99770 * 10 9 8 35 35 H 1.08002 * 120.02971 * 0.02562 * 13 12 11 36 36 H 1.09003 * 109.47515 * 60.30110 * 15 14 13 37 37 H 0.96706 * 114.00265 * 300.00912 * 16 15 14 38 38 H 1.48508 * 109.99914 * 180.02562 * 17 15 14 39 39 H 1.48496 * 110.00142 * 301.31592 * 17 15 14 40 40 H 1.07999 * 119.93831 * 179.69426 * 18 14 13 41 41 H 1.08001 * 119.96762 * 180.02562 * 19 18 14 42 42 H 1.08001 * 120.02703 * 180.02562 * 20 19 18 43 43 H 1.08999 * 113.61579 * 25.35293 * 21 4 2 44 44 H 1.09005 * 113.61260 * 156.24814 * 21 4 2 45 45 H 0.96700 * 113.99331 * 179.97438 * 24 22 21 46 46 H 1.08999 * 113.61520 * 270.88183 * 25 22 21 47 47 H 1.09004 * 113.61246 * 139.98170 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3050 -0.0006 5 7 1.4412 -2.3434 0.7944 6 6 1.3388 -2.2056 2.1313 7 8 1.8715 -1.2683 2.6867 8 6 0.5623 -3.2160 2.9356 9 6 0.6015 -2.8288 4.4153 10 6 -0.1863 -3.8550 5.2321 11 8 -0.1492 -3.4938 6.6142 12 6 -0.8061 -4.3072 7.4824 13 6 -0.8063 -4.0193 8.8393 14 6 -1.4797 -4.8447 9.7193 15 6 -1.4856 -4.5291 11.1928 16 8 -0.1432 -4.5151 11.6824 17 14 -2.4646 -5.8274 12.1020 18 6 -2.1428 -5.9632 9.2498 19 6 -2.1395 -6.2552 7.8981 20 6 -1.4727 -5.4301 7.0137 21 6 3.5997 -1.1513 0.3092 22 6 3.8132 -0.9684 -1.2027 23 1 3.7379 0.0679 -1.5321 24 8 4.9812 -1.6251 -1.6994 25 6 2.5201 -1.7761 -1.4033 26 1 -0.4850 -0.8369 -0.0734 27 1 -0.4851 0.8368 0.0735 28 1 1.0778 -3.1303 0.3588 29 1 1.0069 -4.2027 2.8060 30 1 -0.4722 -3.2357 2.5930 31 1 0.1567 -1.8423 4.5446 32 1 1.6359 -2.8089 4.7583 33 1 0.2588 -4.8415 5.1026 34 1 -1.2209 -3.8754 4.8892 35 1 -0.2846 -3.1481 9.2071 36 1 -1.9411 -3.5519 11.3533 37 1 0.3245 -5.3543 11.5722 38 1 -2.4786 -5.5273 13.5563 39 1 -3.8541 -5.8739 11.5802 40 1 -2.6644 -6.6098 9.9399 41 1 -2.6587 -7.1294 7.5338 42 1 -1.4708 -5.6585 5.9581 43 1 3.8357 -0.2623 0.8942 44 1 4.0580 -2.0560 0.7087 45 1 5.1206 -1.5140 -2.6498 46 1 2.6832 -2.8516 -1.4721 47 1 1.8844 -1.3915 -2.2009 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549616.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:15 Heat of formation + Delta-G solvation = -147.279307 kcal Electronic energy + Delta-G solvation = -30187.184851 eV Core-core repulsion = 25723.369664 eV Total energy + Delta-G solvation = -4463.815187 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.161 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.33423 -41.26898 -40.27481 -39.18707 -39.01813 -37.30297 -36.48505 -34.96589 -34.86134 -33.84035 -32.43989 -31.22796 -28.59898 -27.12359 -26.90485 -26.20899 -23.82887 -23.60869 -22.82843 -21.86106 -21.35677 -20.48352 -19.26649 -19.09234 -18.44542 -18.22577 -17.82313 -17.71045 -17.45484 -17.15729 -16.88335 -16.78011 -16.36723 -16.10459 -16.02651 -15.68873 -15.40407 -15.17472 -14.80409 -14.67507 -14.61980 -14.27271 -14.18675 -13.87810 -13.59247 -13.40896 -13.23938 -13.19176 -13.04375 -12.74010 -12.61302 -12.31279 -12.24544 -11.97410 -11.82870 -11.61865 -11.58855 -11.54680 -11.06104 -10.91739 -10.82336 -10.51200 -10.27352 -9.90450 -9.23682 -4.99303 0.22369 0.41532 1.24823 1.29633 1.51582 1.64452 1.81760 1.96233 2.29939 2.30283 2.69469 3.09857 3.22097 3.41686 3.50100 3.57407 3.61084 3.67286 3.80557 3.86088 3.88713 3.97171 4.08856 4.13336 4.24603 4.25851 4.36020 4.41687 4.43020 4.53124 4.53573 4.59883 4.64311 4.68769 4.76038 4.83314 4.95938 4.99413 5.00888 5.15817 5.25789 5.30278 5.39463 5.46247 5.69592 5.75856 6.24103 6.43715 6.45002 6.73964 6.81170 7.12320 7.18262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.828 5.828 2 C 0.530 3.470 3 O -0.579 6.579 4 C 0.131 3.869 5 N -0.698 5.698 6 C 0.507 3.493 7 O -0.575 6.575 8 C -0.124 4.124 9 C -0.104 4.104 10 C 0.058 3.942 11 O -0.341 6.341 12 C 0.116 3.884 13 C -0.154 4.154 14 C -0.085 4.085 15 C -0.085 4.085 16 O -0.558 6.558 17 Si 0.794 3.206 18 C -0.161 4.161 19 C -0.072 4.072 20 C -0.204 4.204 21 C -0.117 4.117 22 C 0.078 3.922 23 H 0.081 0.919 24 O -0.570 6.570 25 C -0.129 4.129 26 H 0.417 0.583 27 H 0.409 0.591 28 H 0.430 0.570 29 H 0.133 0.867 30 H 0.137 0.863 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.086 0.914 34 H 0.086 0.914 35 H 0.112 0.888 36 H 0.101 0.899 37 H 0.395 0.605 38 H -0.301 1.301 39 H -0.280 1.280 40 H 0.148 0.852 41 H 0.161 0.839 42 H 0.156 0.844 43 H 0.052 0.948 44 H 0.098 0.902 45 H 0.399 0.601 46 H 0.135 0.865 47 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.695 -12.323 -7.866 16.080 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.392 5.392 2 C 0.313 3.687 3 O -0.457 6.457 4 C 0.040 3.960 5 N -0.355 5.355 6 C 0.296 3.704 7 O -0.453 6.453 8 C -0.163 4.163 9 C -0.142 4.142 10 C -0.016 4.016 11 O -0.256 6.256 12 C 0.071 3.929 13 C -0.173 4.173 14 C -0.086 4.086 15 C -0.194 4.194 16 O -0.366 6.366 17 Si 0.700 3.300 18 C -0.178 4.178 19 C -0.089 4.089 20 C -0.223 4.223 21 C -0.156 4.156 22 C 0.018 3.982 23 H 0.099 0.901 24 O -0.378 6.378 25 C -0.167 4.167 26 H 0.249 0.751 27 H 0.240 0.760 28 H 0.270 0.730 29 H 0.151 0.849 30 H 0.155 0.845 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.104 0.896 34 H 0.104 0.896 35 H 0.130 0.870 36 H 0.118 0.882 37 H 0.245 0.755 38 H -0.230 1.230 39 H -0.207 1.207 40 H 0.165 0.835 41 H 0.178 0.822 42 H 0.174 0.826 43 H 0.071 0.929 44 H 0.116 0.884 45 H 0.250 0.750 46 H 0.153 0.847 47 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -6.472 -10.632 -6.197 13.905 hybrid contribution -0.315 1.232 -0.748 1.476 sum -6.788 -9.400 -6.945 13.515 Atomic orbital electron populations 1.43582 1.05926 1.14332 1.75360 1.20416 0.83745 0.90149 0.74419 1.90765 1.69397 1.34427 1.51147 1.21265 0.91820 0.86916 0.95987 1.45730 1.60206 1.23402 1.06176 1.21433 0.79828 0.86589 0.82587 1.90815 1.47833 1.35368 1.71301 1.21554 1.03464 0.99193 0.92073 1.21168 1.00675 0.98639 0.93735 1.23006 1.01872 0.99324 0.77442 1.86059 1.70114 1.50307 1.19092 1.19197 0.93116 0.90836 0.89751 1.20314 1.04195 1.02168 0.90640 1.20209 0.97418 0.95200 0.95744 1.25407 0.90938 1.09766 0.93300 1.86472 1.25228 1.41571 1.83345 0.93505 0.77414 0.84509 0.74613 1.21193 1.02192 0.97386 0.97062 1.21325 0.96224 0.99132 0.92253 1.21609 1.02591 0.95781 1.02293 1.23200 0.93138 1.02846 0.96406 1.23133 0.85177 0.95727 0.94160 0.90074 1.86491 1.44913 1.75882 1.30546 1.23900 0.96624 1.03937 0.92202 0.75116 0.75980 0.72977 0.84862 0.84474 0.92494 0.92511 0.89580 0.89624 0.86961 0.88174 0.75464 1.22981 1.20714 0.83484 0.82158 0.82626 0.92921 0.88385 0.75018 0.84722 0.87885 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.26 8.78 -173.53 -1.52 1.73 16 2 C 0.53 2.46 6.60 87.66 0.58 3.04 16 3 O -0.58 -8.88 16.21 -3.05 -0.05 -8.93 16 4 C 0.13 -0.12 1.05 3.38 0.00 -0.11 16 5 N -0.70 5.36 4.79 -423.95 -2.03 3.33 16 6 C 0.51 -0.78 7.48 87.66 0.66 -0.13 16 7 O -0.58 -6.55 15.02 -3.01 -0.05 -6.60 16 8 C -0.12 1.23 5.70 29.85 0.17 1.40 16 9 C -0.10 0.17 4.87 30.60 0.15 0.31 16 10 C 0.06 -0.23 4.74 71.98 0.34 0.11 16 11 O -0.34 -1.85 10.14 -92.41 -0.94 -2.79 16 12 C 0.12 0.50 6.69 22.51 0.15 0.65 16 13 C -0.15 -0.99 9.55 22.37 0.21 -0.78 16 14 C -0.09 -0.21 5.39 -19.88 -0.11 -0.31 16 15 C -0.09 -0.16 2.82 71.23 0.20 0.04 16 16 O -0.56 -1.80 12.76 -148.98 -1.90 -3.70 16 17 Si 0.79 -1.52 29.79 68.60 2.04 0.52 16 18 C -0.16 0.29 8.67 22.28 0.19 0.48 16 19 C -0.07 0.27 10.04 22.25 0.22 0.49 16 20 C -0.20 0.39 9.04 22.36 0.20 0.59 16 21 C -0.12 -0.72 6.16 31.12 0.19 -0.53 16 22 C 0.08 0.12 4.82 31.12 0.15 0.27 16 23 H 0.08 0.34 7.63 -2.39 -0.02 0.32 16 24 O -0.57 -0.72 13.67 -148.98 -2.04 -2.75 16 25 C -0.13 0.85 7.21 31.12 0.22 1.07 16 26 H 0.42 -4.79 8.47 -92.71 -0.79 -5.58 16 27 H 0.41 -1.69 8.93 -92.71 -0.83 -2.51 16 28 H 0.43 -7.27 8.71 -92.71 -0.81 -8.08 16 29 H 0.13 -2.11 8.14 -2.39 -0.02 -2.13 16 30 H 0.14 -2.33 8.14 -2.39 -0.02 -2.35 16 31 H 0.06 0.20 8.10 -2.39 -0.02 0.19 16 32 H 0.06 0.22 8.10 -2.39 -0.02 0.20 16 33 H 0.09 -0.72 7.66 -2.39 -0.02 -0.73 16 34 H 0.09 -0.73 7.66 -2.38 -0.02 -0.75 16 35 H 0.11 1.06 8.06 -2.91 -0.02 1.03 16 36 H 0.10 0.40 7.96 -2.39 -0.02 0.38 16 37 H 0.40 -2.11 8.70 -74.05 -0.64 -2.75 16 38 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 39 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 40 H 0.15 -0.93 4.87 -2.91 -0.01 -0.95 16 41 H 0.16 -1.59 8.06 -2.91 -0.02 -1.62 16 42 H 0.16 -1.25 6.30 -2.91 -0.02 -1.26 16 43 H 0.05 0.76 7.63 -2.39 -0.02 0.74 16 44 H 0.10 0.58 8.14 -2.38 -0.02 0.56 16 45 H 0.40 -3.11 9.12 -74.06 -0.68 -3.79 16 46 H 0.13 -1.48 8.14 -2.39 -0.02 -1.50 16 47 H 0.10 -1.00 8.10 -2.38 -0.02 -1.02 16 Total: 0.00 -39.43 392.83 -5.57 -45.00 By element: Atomic # 1 Polarization: -29.79 SS G_CDS: -2.63 Total: -32.42 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: 3.54 Total: 6.60 kcal Atomic # 7 Polarization: 8.61 SS G_CDS: -3.55 Total: 5.06 kcal Atomic # 8 Polarization: -19.79 SS G_CDS: -4.97 Total: -24.76 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: 2.04 Total: 0.52 kcal Total: -39.43 -5.57 -45.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549616.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.275 kcal (2) G-P(sol) polarization free energy of solvation -39.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.573 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.005 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds