Wall clock time and date at job start Sat Mar 6 2021 22:41:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34778 * 1 3 3 O 1.21282 * 120.00003 * 2 1 4 4 C 1.50701 * 120.00150 * 180.02562 * 2 1 3 5 5 N 1.46497 * 112.84986 * 323.90710 * 4 2 1 6 6 C 1.34777 * 120.00216 * 293.53604 * 5 4 2 7 7 O 1.21558 * 119.99510 * 354.97512 * 6 5 4 8 8 C 1.47849 * 120.00325 * 174.70975 * 6 5 4 9 9 C 1.39559 * 120.14154 * 179.97438 * 8 6 5 10 10 C 1.37977 * 119.84856 * 179.76549 * 9 8 6 11 11 C 1.50697 * 119.92863 * 180.24913 * 10 9 8 12 12 O 1.42901 * 109.47212 * 270.25501 * 11 10 9 13 13 C 1.35903 * 117.00314 * 179.97438 * 12 11 10 14 14 C 1.38708 * 120.05586 * 179.97438 * 13 12 11 15 15 C 1.38166 * 119.93995 * 180.02562 * 14 13 12 16 16 C 1.50701 * 119.97081 * 180.02562 * 15 14 13 17 17 O 1.42908 * 109.47033 * 65.00138 * 16 15 14 18 18 Si 1.86300 * 109.47207 * 185.00008 * 16 15 14 19 19 C 1.38241 * 120.05635 * 0.02562 * 15 14 13 20 20 C 1.38288 * 120.11548 * 0.02562 * 19 15 14 21 21 C 1.38126 * 120.05063 * 359.67310 * 20 19 15 22 22 C 1.38341 * 120.14397 * 0.50729 * 10 9 8 23 23 C 1.38382 * 120.29504 * 359.73961 * 22 10 9 24 24 C 1.37936 * 120.14316 * 0.02562 * 23 22 10 25 25 C 1.53778 * 113.61702 * 192.70764 * 4 2 1 26 26 C 1.53768 * 87.08416 * 270.80129 * 25 4 2 27 27 H 1.08997 * 113.61657 * 89.19911 * 26 25 4 28 28 O 1.42901 * 113.61587 * 220.01870 * 26 25 4 29 29 C 1.53778 * 113.69079 * 95.17165 * 4 2 1 30 30 H 0.97006 * 119.99887 * 174.95995 * 1 2 3 31 31 H 0.96994 * 119.99782 * 354.95028 * 1 2 3 32 32 H 0.97002 * 120.00117 * 113.52620 * 5 4 2 33 33 H 1.08000 * 120.07415 * 359.97438 * 9 8 6 34 34 H 1.08995 * 109.47104 * 30.25684 * 11 10 9 35 35 H 1.09006 * 109.47099 * 150.25514 * 11 10 9 36 36 H 1.07991 * 120.02857 * 359.97438 * 14 13 12 37 37 H 1.08997 * 109.47119 * 305.00187 * 16 15 14 38 38 H 0.96696 * 113.99471 * 180.02562 * 17 16 15 39 39 H 1.48503 * 110.00070 * 299.99992 * 18 16 15 40 40 H 1.48496 * 109.99688 * 61.32131 * 18 16 15 41 41 H 1.08004 * 119.93953 * 179.97438 * 19 15 14 42 42 H 1.07993 * 119.97313 * 179.97438 * 20 19 15 43 43 H 1.08002 * 120.02093 * 180.32160 * 21 20 19 44 44 H 1.08002 * 119.85411 * 179.72513 * 22 10 9 45 45 H 1.07995 * 119.92598 * 179.97438 * 23 22 10 46 46 H 1.07994 * 120.07342 * 179.97438 * 24 23 22 47 47 H 1.09001 * 113.60937 * 25.34944 * 25 4 2 48 48 H 1.09003 * 113.61245 * 156.24796 * 25 4 2 49 49 H 0.96706 * 114.00291 * 179.97438 * 28 26 25 50 50 H 1.09002 * 113.61675 * 203.67105 * 29 4 2 51 51 H 1.08998 * 113.61943 * 334.58074 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 7 1.4410 -2.3436 0.7942 6 6 1.3418 -2.2077 2.1315 7 8 1.8790 -1.2703 2.6886 8 6 0.5747 -3.1954 2.9200 9 6 0.4705 -3.0578 4.3049 10 6 -0.2509 -3.9805 5.0343 11 6 -0.3693 -3.8305 6.5292 12 8 0.7095 -4.5198 7.1640 13 6 0.7516 -4.4827 8.5219 14 6 1.7711 -5.1309 9.2033 15 6 1.8112 -5.0920 10.5839 16 6 2.9190 -5.7955 11.3249 17 8 4.1683 -5.1745 11.0156 18 14 2.6075 -5.6848 13.1584 19 6 0.8361 -4.4084 11.2859 20 6 -0.1820 -3.7622 10.6089 21 6 -0.2231 -3.7929 9.2286 22 6 -0.8614 -5.0459 4.3971 23 6 -0.7576 -5.1910 3.0248 24 6 -0.0434 -4.2730 2.2833 25 6 3.5997 -1.1515 0.3094 26 6 3.8134 -0.9685 -1.2023 27 1 3.7382 0.0678 -1.5316 28 8 4.9814 -1.6252 -1.6989 29 6 2.5202 -1.7761 -1.4033 30 1 -0.4850 -0.8369 -0.0738 31 1 -0.4849 0.8367 0.0739 32 1 1.0751 -3.1289 0.3581 33 1 0.9506 -2.2292 4.8041 34 1 -0.3302 -2.7736 6.7925 35 1 -1.3170 -4.2532 6.8628 36 1 2.5324 -5.6661 8.6553 37 1 2.9494 -6.8427 11.0241 38 1 4.9278 -5.5769 11.4586 39 1 2.5637 -4.2619 13.5812 40 1 1.3265 -6.3551 13.4972 41 1 0.8691 -4.3796 12.3650 42 1 -0.9428 -3.2292 11.1596 43 1 -1.0155 -3.2837 8.7001 44 1 -1.4212 -5.7678 4.9732 45 1 -1.2362 -6.0252 2.5335 46 1 0.0372 -4.3875 1.2125 47 1 3.8355 -0.2626 0.8945 48 1 4.0579 -2.0563 0.7089 49 1 5.1210 -1.5140 -2.6494 50 1 2.6835 -2.8516 -1.4721 51 1 1.8847 -1.3915 -2.2009 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4549630.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:19 Heat of formation + Delta-G solvation = -91.482631 kcal Electronic energy + Delta-G solvation = -36358.289971 eV Core-core repulsion = 31383.989747 eV Total energy + Delta-G solvation = -4974.300224 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.161 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.36288 -41.42451 -40.80584 -39.53344 -38.94319 -38.73183 -37.27656 -36.42830 -34.88412 -34.33697 -33.22277 -32.58653 -32.23201 -31.06209 -27.89550 -27.13473 -26.82239 -26.55751 -24.87424 -23.67406 -23.23291 -22.92199 -22.06780 -21.29951 -20.43650 -19.39864 -18.96466 -18.81783 -18.40420 -18.35994 -17.69796 -17.44346 -17.34342 -17.21806 -17.12017 -16.73321 -16.17275 -16.00707 -15.90922 -15.83433 -15.55337 -15.40928 -15.17582 -14.93445 -14.63890 -14.55430 -14.49958 -14.26295 -13.94770 -13.82191 -13.64420 -13.57847 -13.53077 -13.19099 -13.17840 -12.86163 -12.52374 -12.43438 -12.21959 -12.09955 -12.00258 -11.78873 -11.76070 -11.42742 -11.07461 -10.94905 -10.74389 -10.37252 -10.32294 -10.16856 -10.10867 -9.89332 -9.24447 -4.96554 -0.38631 0.04054 0.20892 0.40519 1.26714 1.32857 1.59984 1.64865 1.82681 1.97816 2.17504 2.32322 2.64017 2.76810 3.06780 3.18122 3.35858 3.37359 3.43426 3.46527 3.59652 3.59798 3.75151 3.76646 3.82348 3.85710 3.93564 3.96003 4.04306 4.11042 4.15290 4.21654 4.27274 4.33072 4.37662 4.51169 4.53985 4.55049 4.63296 4.74952 4.75177 4.89027 4.96934 5.03642 5.10034 5.11651 5.20288 5.23628 5.25855 5.35023 5.44613 5.60913 5.65978 5.68966 6.14952 6.24885 6.36163 6.63048 6.63094 7.00235 7.15079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.847 5.847 2 C 0.539 3.461 3 O -0.523 6.523 4 C 0.127 3.873 5 N -0.715 5.715 6 C 0.560 3.440 7 O -0.513 6.513 8 C -0.139 4.139 9 C -0.032 4.032 10 C -0.103 4.103 11 C 0.100 3.900 12 O -0.306 6.306 13 C 0.133 3.867 14 C -0.121 4.121 15 C -0.036 4.036 16 C -0.074 4.074 17 O -0.544 6.544 18 Si 0.687 3.313 19 C -0.162 4.162 20 C -0.071 4.071 21 C -0.205 4.205 22 C -0.065 4.065 23 C -0.127 4.127 24 C -0.075 4.075 25 C -0.104 4.104 26 C 0.082 3.918 27 H 0.097 0.903 28 O -0.553 6.553 29 C -0.157 4.157 30 H 0.400 0.600 31 H 0.406 0.594 32 H 0.405 0.595 33 H 0.139 0.861 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.136 0.864 37 H 0.076 0.924 38 H 0.383 0.617 39 H -0.250 1.250 40 H -0.255 1.255 41 H 0.120 0.880 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.132 0.868 45 H 0.136 0.864 46 H 0.129 0.871 47 H 0.095 0.905 48 H 0.102 0.898 49 H 0.381 0.619 50 H 0.111 0.889 51 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.909 -7.012 -2.206 8.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.410 5.410 2 C 0.321 3.679 3 O -0.397 6.397 4 C 0.037 3.963 5 N -0.371 5.371 6 C 0.347 3.653 7 O -0.387 6.387 8 C -0.142 4.142 9 C -0.051 4.051 10 C -0.103 4.103 11 C 0.026 3.974 12 O -0.220 6.220 13 C 0.087 3.913 14 C -0.139 4.139 15 C -0.036 4.036 16 C -0.184 4.184 17 O -0.350 6.350 18 Si 0.589 3.411 19 C -0.179 4.179 20 C -0.090 4.090 21 C -0.223 4.223 22 C -0.083 4.083 23 C -0.145 4.145 24 C -0.094 4.094 25 C -0.143 4.143 26 C 0.022 3.978 27 H 0.115 0.885 28 O -0.359 6.359 29 C -0.195 4.195 30 H 0.228 0.772 31 H 0.237 0.763 32 H 0.242 0.758 33 H 0.157 0.843 34 H 0.094 0.906 35 H 0.094 0.906 36 H 0.153 0.847 37 H 0.094 0.906 38 H 0.231 0.769 39 H -0.175 1.175 40 H -0.180 1.180 41 H 0.137 0.863 42 H 0.148 0.852 43 H 0.150 0.850 44 H 0.150 0.850 45 H 0.153 0.847 46 H 0.147 0.853 47 H 0.114 0.886 48 H 0.120 0.880 49 H 0.229 0.771 50 H 0.129 0.871 51 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -4.705 -5.297 -1.052 7.162 hybrid contribution -1.362 -0.255 -1.302 1.902 sum -6.067 -5.552 -2.354 8.554 Atomic orbital electron populations 1.43705 1.06966 1.13197 1.77162 1.19948 0.82817 0.89988 0.75170 1.90788 1.68111 1.32331 1.48429 1.21532 0.93586 0.86825 0.94348 1.45800 1.61062 1.23544 1.06684 1.18347 0.79955 0.85272 0.81679 1.90868 1.45340 1.32327 1.70189 1.19805 1.02778 0.97351 0.94278 1.21199 0.93582 0.97937 0.92357 1.19417 1.00528 0.96637 0.93689 1.21605 0.89644 0.97502 0.88679 1.86163 1.48382 1.71000 1.16465 1.18975 0.94645 0.95399 0.82233 1.20238 0.98247 1.02598 0.92863 1.19122 0.94570 0.96997 0.92909 1.24734 0.85524 0.97755 1.10421 1.86513 1.15321 1.59748 1.73426 0.95343 0.86038 0.82723 0.77041 1.20811 0.96940 1.01141 0.99034 1.20862 0.97385 0.97143 0.93563 1.21302 1.01005 1.04722 0.95301 1.21351 0.96547 0.95577 0.94868 1.21135 0.99811 0.99681 0.93860 1.21361 0.95148 0.92990 0.99903 1.23220 0.90410 1.05061 0.95558 1.23214 0.83532 0.95614 0.95432 0.88542 1.86546 1.44608 1.75978 1.28734 1.24016 0.98991 1.03167 0.93330 0.77151 0.76266 0.75786 0.84274 0.90599 0.90566 0.84653 0.90585 0.76934 1.17502 1.17955 0.86258 0.85178 0.85030 0.85012 0.84654 0.85317 0.88600 0.87987 0.77089 0.87110 0.89748 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.97 8.78 31.22 0.27 1.25 16 2 C 0.54 1.28 6.61 -10.98 -0.07 1.20 16 3 O -0.52 -3.41 16.21 5.56 0.09 -3.32 16 4 C 0.13 0.04 1.05 -132.16 -0.14 -0.09 16 5 N -0.71 1.01 4.73 -48.86 -0.23 0.78 16 6 C 0.56 1.00 7.43 -12.33 -0.09 0.91 16 7 O -0.51 -3.16 15.39 5.31 0.08 -3.07 16 8 C -0.14 -0.05 5.87 -104.97 -0.62 -0.66 16 9 C -0.03 -0.04 9.25 -39.18 -0.36 -0.41 16 10 C -0.10 -0.02 5.50 -104.68 -0.58 -0.59 16 11 C 0.10 0.00 4.86 36.00 0.17 0.18 16 12 O -0.31 -0.88 10.12 -19.44 -0.20 -1.08 16 13 C 0.13 0.43 6.69 -39.22 -0.26 0.16 16 14 C -0.12 -0.45 9.62 -39.43 -0.38 -0.83 16 15 C -0.04 -0.12 5.38 -104.65 -0.56 -0.68 16 16 C -0.07 -0.05 2.79 36.01 0.10 0.05 16 17 O -0.54 -0.62 12.81 -35.23 -0.45 -1.07 16 18 Si 0.69 -0.41 29.85 -169.99 -5.07 -5.48 16 19 C -0.16 -0.49 8.67 -39.56 -0.34 -0.83 16 20 C -0.07 -0.14 10.04 -39.60 -0.40 -0.54 16 21 C -0.20 -0.37 9.04 -39.43 -0.36 -0.73 16 22 C -0.07 0.09 9.69 -39.49 -0.38 -0.29 16 23 C -0.13 0.31 10.03 -39.64 -0.40 -0.08 16 24 C -0.08 0.18 9.54 -39.19 -0.37 -0.19 16 25 C -0.10 -0.28 6.14 -25.93 -0.16 -0.44 16 26 C 0.08 0.06 4.82 -25.92 -0.13 -0.06 16 27 H 0.10 0.12 7.63 -51.93 -0.40 -0.28 16 28 O -0.55 -0.50 13.67 -35.23 -0.48 -0.98 16 29 C -0.16 0.31 7.21 -25.92 -0.19 0.12 16 30 H 0.40 -1.57 8.47 -40.82 -0.35 -1.91 16 31 H 0.41 -0.67 8.93 -40.82 -0.36 -1.03 16 32 H 0.40 -1.95 6.76 -40.82 -0.28 -2.22 16 33 H 0.14 0.33 7.65 -52.49 -0.40 -0.07 16 34 H 0.08 -0.05 7.59 -51.93 -0.39 -0.45 16 35 H 0.08 -0.14 7.62 -51.93 -0.40 -0.54 16 36 H 0.14 0.44 8.06 -52.49 -0.42 0.02 16 37 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 38 H 0.38 -1.57 8.74 45.56 0.40 -1.18 16 39 H -0.25 -0.65 7.05 56.52 0.40 -0.25 16 40 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 41 H 0.12 0.28 4.86 -52.48 -0.26 0.03 16 42 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 43 H 0.13 -0.08 6.30 -52.49 -0.33 -0.41 16 44 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 45 H 0.14 -0.63 8.06 -52.49 -0.42 -1.06 16 46 H 0.13 -0.73 6.42 -52.49 -0.34 -1.07 16 47 H 0.10 0.51 7.63 -51.93 -0.40 0.11 16 48 H 0.10 0.30 8.14 -51.93 -0.42 -0.12 16 49 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 50 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 51 H 0.08 -0.27 8.10 -51.93 -0.42 -0.69 16 LS Contribution 428.25 15.07 6.45 6.45 Total: 0.00 -14.25 428.25 -10.70 -24.95 By element: Atomic # 1 Polarization: -8.96 SS G_CDS: -5.65 Total: -14.61 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -5.51 Total: -3.81 kcal Atomic # 7 Polarization: 1.98 SS G_CDS: 0.04 Total: 2.02 kcal Atomic # 8 Polarization: -8.57 SS G_CDS: -0.96 Total: -9.53 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.07 Total: -5.48 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -14.25 -10.70 -24.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549630.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.533 kcal (2) G-P(sol) polarization free energy of solvation -14.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds