Wall clock time and date at job start Sat Mar 6 2021 22:41:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34778 * 1 3 3 O 1.21282 * 120.00003 * 2 1 4 4 C 1.50701 * 120.00150 * 180.02562 * 2 1 3 5 5 N 1.46497 * 112.84986 * 323.90710 * 4 2 1 6 6 C 1.34777 * 120.00216 * 293.53604 * 5 4 2 7 7 O 1.21558 * 119.99510 * 354.97512 * 6 5 4 8 8 C 1.47849 * 120.00325 * 174.70975 * 6 5 4 9 9 C 1.39559 * 120.14154 * 179.97438 * 8 6 5 10 10 C 1.37977 * 119.84856 * 179.76549 * 9 8 6 11 11 C 1.50697 * 119.92863 * 180.24913 * 10 9 8 12 12 O 1.42901 * 109.47212 * 270.25501 * 11 10 9 13 13 C 1.35903 * 117.00314 * 179.97438 * 12 11 10 14 14 C 1.38708 * 120.05586 * 179.97438 * 13 12 11 15 15 C 1.38166 * 119.93995 * 180.02562 * 14 13 12 16 16 C 1.50701 * 119.97081 * 180.02562 * 15 14 13 17 17 O 1.42908 * 109.47033 * 65.00138 * 16 15 14 18 18 Si 1.86300 * 109.47207 * 185.00008 * 16 15 14 19 19 C 1.38241 * 120.05635 * 0.02562 * 15 14 13 20 20 C 1.38288 * 120.11548 * 0.02562 * 19 15 14 21 21 C 1.38126 * 120.05063 * 359.67310 * 20 19 15 22 22 C 1.38341 * 120.14397 * 0.50729 * 10 9 8 23 23 C 1.38382 * 120.29504 * 359.73961 * 22 10 9 24 24 C 1.37936 * 120.14316 * 0.02562 * 23 22 10 25 25 C 1.53778 * 113.61702 * 192.70764 * 4 2 1 26 26 C 1.53768 * 87.08416 * 270.80129 * 25 4 2 27 27 H 1.08997 * 113.61657 * 89.19911 * 26 25 4 28 28 O 1.42901 * 113.61587 * 220.01870 * 26 25 4 29 29 C 1.53778 * 113.69079 * 95.17165 * 4 2 1 30 30 H 0.97006 * 119.99887 * 174.95995 * 1 2 3 31 31 H 0.96994 * 119.99782 * 354.95028 * 1 2 3 32 32 H 0.97002 * 120.00117 * 113.52620 * 5 4 2 33 33 H 1.08000 * 120.07415 * 359.97438 * 9 8 6 34 34 H 1.08995 * 109.47104 * 30.25684 * 11 10 9 35 35 H 1.09006 * 109.47099 * 150.25514 * 11 10 9 36 36 H 1.07991 * 120.02857 * 359.97438 * 14 13 12 37 37 H 1.08997 * 109.47119 * 305.00187 * 16 15 14 38 38 H 0.96696 * 113.99471 * 180.02562 * 17 16 15 39 39 H 1.48503 * 110.00070 * 299.99992 * 18 16 15 40 40 H 1.48496 * 109.99688 * 61.32131 * 18 16 15 41 41 H 1.08004 * 119.93953 * 179.97438 * 19 15 14 42 42 H 1.07993 * 119.97313 * 179.97438 * 20 19 15 43 43 H 1.08002 * 120.02093 * 180.32160 * 21 20 19 44 44 H 1.08002 * 119.85411 * 179.72513 * 22 10 9 45 45 H 1.07995 * 119.92598 * 179.97438 * 23 22 10 46 46 H 1.07994 * 120.07342 * 179.97438 * 24 23 22 47 47 H 1.09001 * 113.60937 * 25.34944 * 25 4 2 48 48 H 1.09003 * 113.61245 * 156.24796 * 25 4 2 49 49 H 0.96706 * 114.00291 * 179.97438 * 28 26 25 50 50 H 1.09002 * 113.61675 * 203.67105 * 29 4 2 51 51 H 1.08998 * 113.61943 * 334.58074 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 7 1.4410 -2.3436 0.7942 6 6 1.3418 -2.2077 2.1315 7 8 1.8790 -1.2703 2.6886 8 6 0.5747 -3.1954 2.9200 9 6 0.4705 -3.0578 4.3049 10 6 -0.2509 -3.9805 5.0343 11 6 -0.3693 -3.8305 6.5292 12 8 0.7095 -4.5198 7.1640 13 6 0.7516 -4.4827 8.5219 14 6 1.7711 -5.1309 9.2033 15 6 1.8112 -5.0920 10.5839 16 6 2.9190 -5.7955 11.3249 17 8 4.1683 -5.1745 11.0156 18 14 2.6075 -5.6848 13.1584 19 6 0.8361 -4.4084 11.2859 20 6 -0.1820 -3.7622 10.6089 21 6 -0.2231 -3.7929 9.2286 22 6 -0.8614 -5.0459 4.3971 23 6 -0.7576 -5.1910 3.0248 24 6 -0.0434 -4.2730 2.2833 25 6 3.5997 -1.1515 0.3094 26 6 3.8134 -0.9685 -1.2023 27 1 3.7382 0.0678 -1.5316 28 8 4.9814 -1.6252 -1.6989 29 6 2.5202 -1.7761 -1.4033 30 1 -0.4850 -0.8369 -0.0738 31 1 -0.4849 0.8367 0.0739 32 1 1.0751 -3.1289 0.3581 33 1 0.9506 -2.2292 4.8041 34 1 -0.3302 -2.7736 6.7925 35 1 -1.3170 -4.2532 6.8628 36 1 2.5324 -5.6661 8.6553 37 1 2.9494 -6.8427 11.0241 38 1 4.9278 -5.5769 11.4586 39 1 2.5637 -4.2619 13.5812 40 1 1.3265 -6.3551 13.4972 41 1 0.8691 -4.3796 12.3650 42 1 -0.9428 -3.2292 11.1596 43 1 -1.0155 -3.2837 8.7001 44 1 -1.4212 -5.7678 4.9732 45 1 -1.2362 -6.0252 2.5335 46 1 0.0372 -4.3875 1.2125 47 1 3.8355 -0.2626 0.8945 48 1 4.0579 -2.0563 0.7089 49 1 5.1210 -1.5140 -2.6494 50 1 2.6835 -2.8516 -1.4721 51 1 1.8847 -1.3915 -2.2009 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549630.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:18 Heat of formation + Delta-G solvation = -101.846432 kcal Electronic energy + Delta-G solvation = -36358.739379 eV Core-core repulsion = 31383.989747 eV Total energy + Delta-G solvation = -4974.749632 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.161 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.45498 -41.52069 -40.86519 -39.64574 -39.06862 -38.80494 -37.34069 -36.53339 -34.96476 -34.41544 -33.20510 -32.71494 -32.15225 -31.19172 -27.91097 -27.19939 -26.86208 -26.59598 -24.90633 -23.83584 -23.17056 -22.99573 -22.14840 -21.34140 -20.53439 -19.42213 -19.06870 -18.85730 -18.44297 -18.40043 -17.77900 -17.59166 -17.34264 -17.23875 -17.14512 -16.81142 -16.25905 -16.08593 -16.01480 -15.92818 -15.56517 -15.52551 -15.27311 -14.91512 -14.71145 -14.67042 -14.59997 -14.31313 -13.96352 -13.77638 -13.70126 -13.59053 -13.54130 -13.35467 -13.23383 -12.80852 -12.66730 -12.50252 -12.29981 -12.14426 -12.07309 -11.86269 -11.84841 -11.59885 -11.16136 -11.01980 -10.84382 -10.44229 -10.41273 -10.06718 -10.04574 -10.03012 -9.42609 -4.95224 -0.32165 0.04507 0.11594 0.20996 1.20302 1.26307 1.57050 1.63685 1.77682 1.95190 2.11894 2.27709 2.48320 2.81056 3.06098 3.18956 3.34936 3.36039 3.47275 3.49392 3.56829 3.68521 3.72250 3.78309 3.79880 3.83886 3.94084 4.04272 4.09832 4.10889 4.12309 4.17126 4.27798 4.37558 4.45879 4.51196 4.56480 4.57674 4.68783 4.73453 4.80518 4.82137 4.85398 4.87696 5.06736 5.13496 5.15942 5.18227 5.26889 5.27469 5.35797 5.52520 5.67500 5.75088 6.19009 6.23450 6.30455 6.81730 6.87047 6.97455 7.09855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.828 5.828 2 C 0.532 3.468 3 O -0.575 6.575 4 C 0.131 3.869 5 N -0.691 5.691 6 C 0.559 3.441 7 O -0.568 6.568 8 C -0.153 4.153 9 C -0.056 4.056 10 C -0.114 4.114 11 C 0.096 3.904 12 O -0.323 6.323 13 C 0.123 3.877 14 C -0.142 4.142 15 C -0.052 4.052 16 C -0.087 4.087 17 O -0.566 6.566 18 Si 0.786 3.214 19 C -0.182 4.182 20 C -0.074 4.074 21 C -0.207 4.207 22 C -0.067 4.067 23 C -0.122 4.122 24 C -0.062 4.062 25 C -0.119 4.119 26 C 0.081 3.919 27 H 0.086 0.914 28 O -0.569 6.569 29 C -0.129 4.129 30 H 0.416 0.584 31 H 0.410 0.590 32 H 0.426 0.574 33 H 0.112 0.888 34 H 0.075 0.925 35 H 0.098 0.902 36 H 0.131 0.869 37 H 0.094 0.906 38 H 0.404 0.596 39 H -0.297 1.297 40 H -0.285 1.285 41 H 0.121 0.879 42 H 0.153 0.847 43 H 0.155 0.845 44 H 0.150 0.850 45 H 0.168 0.832 46 H 0.168 0.832 47 H 0.055 0.945 48 H 0.095 0.905 49 H 0.400 0.600 50 H 0.134 0.866 51 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.904 -9.666 -4.008 12.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.392 5.392 2 C 0.314 3.686 3 O -0.453 6.453 4 C 0.040 3.960 5 N -0.348 5.348 6 C 0.348 3.652 7 O -0.447 6.447 8 C -0.156 4.156 9 C -0.075 4.075 10 C -0.114 4.114 11 C 0.022 3.978 12 O -0.237 6.237 13 C 0.078 3.922 14 C -0.161 4.161 15 C -0.052 4.052 16 C -0.196 4.196 17 O -0.376 6.376 18 Si 0.691 3.309 19 C -0.200 4.200 20 C -0.092 4.092 21 C -0.225 4.225 22 C -0.085 4.085 23 C -0.140 4.140 24 C -0.080 4.080 25 C -0.158 4.158 26 C 0.022 3.978 27 H 0.103 0.897 28 O -0.378 6.378 29 C -0.167 4.167 30 H 0.248 0.752 31 H 0.242 0.758 32 H 0.267 0.733 33 H 0.130 0.870 34 H 0.093 0.907 35 H 0.116 0.884 36 H 0.149 0.851 37 H 0.112 0.888 38 H 0.255 0.745 39 H -0.225 1.225 40 H -0.212 1.212 41 H 0.139 0.861 42 H 0.171 0.829 43 H 0.172 0.828 44 H 0.167 0.833 45 H 0.186 0.814 46 H 0.185 0.815 47 H 0.074 0.926 48 H 0.114 0.886 49 H 0.251 0.749 50 H 0.153 0.847 51 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -6.726 -8.035 -2.916 10.876 hybrid contribution -0.761 0.594 -0.753 1.224 sum -7.486 -7.441 -3.669 11.175 Atomic orbital electron populations 1.43581 1.05938 1.14344 1.75339 1.20315 0.83720 0.90004 0.74531 1.90763 1.69305 1.34166 1.51028 1.21375 0.91899 0.86684 0.96029 1.45553 1.59996 1.23703 1.05569 1.18686 0.79304 0.84752 0.82476 1.90854 1.47732 1.34680 1.71399 1.19761 1.03825 0.98311 0.93713 1.21142 0.94836 0.98120 0.93378 1.19461 1.01161 0.97217 0.93590 1.21798 0.89775 0.97484 0.88779 1.86138 1.49724 1.71424 1.16408 1.19164 0.94945 0.95565 0.82563 1.20366 0.98781 1.03606 0.93339 1.19509 0.95460 0.97160 0.93086 1.24993 0.84910 0.98351 1.11346 1.86461 1.16264 1.60590 1.74256 0.94323 0.83636 0.78759 0.74181 1.21020 0.97682 1.01942 0.99326 1.21204 0.97494 0.96652 0.93861 1.21561 1.01202 1.04372 0.95398 1.21666 0.95932 0.94974 0.95893 1.21553 0.98966 1.00142 0.93334 1.21747 0.93293 0.91191 1.01784 1.23221 0.92836 1.02939 0.96790 1.23097 0.85080 0.95851 0.93804 0.89659 1.86497 1.44818 1.75887 1.30600 1.23934 0.96804 1.04042 0.91896 0.75244 0.75845 0.73266 0.86975 0.90711 0.88393 0.85131 0.88773 0.74461 1.22461 1.21168 0.86143 0.82887 0.82787 0.83254 0.81436 0.81451 0.92588 0.88623 0.74931 0.84747 0.87395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.04 8.78 -173.53 -1.52 0.52 16 2 C 0.53 3.08 6.61 87.66 0.58 3.66 16 3 O -0.57 -9.05 16.21 -3.03 -0.05 -9.10 16 4 C 0.13 0.13 1.05 3.38 0.00 0.13 16 5 N -0.69 2.45 4.73 -426.76 -2.02 0.43 16 6 C 0.56 2.58 7.43 86.79 0.64 3.23 16 7 O -0.57 -8.89 15.39 -3.90 -0.06 -8.95 16 8 C -0.15 -0.14 5.87 -20.09 -0.12 -0.25 16 9 C -0.06 -0.26 9.25 22.53 0.21 -0.05 16 10 C -0.11 -0.10 5.50 -19.90 -0.11 -0.21 16 11 C 0.10 0.09 4.86 71.23 0.35 0.43 16 12 O -0.32 -2.36 10.12 -92.46 -0.94 -3.30 16 13 C 0.12 0.97 6.69 22.51 0.15 1.12 16 14 C -0.14 -1.32 9.62 22.37 0.22 -1.11 16 15 C -0.05 -0.42 5.38 -19.88 -0.11 -0.52 16 16 C -0.09 -0.19 2.79 71.24 0.20 0.01 16 17 O -0.57 -1.71 12.81 -148.98 -1.91 -3.62 16 18 Si 0.79 -0.52 29.85 68.60 2.05 1.53 16 19 C -0.18 -1.33 8.67 22.28 0.19 -1.14 16 20 C -0.07 -0.33 10.04 22.26 0.22 -0.11 16 21 C -0.21 -0.88 9.04 22.37 0.20 -0.68 16 22 C -0.07 0.28 9.69 22.33 0.22 0.50 16 23 C -0.12 0.97 10.03 22.23 0.22 1.20 16 24 C -0.06 0.46 9.54 22.53 0.21 0.67 16 25 C -0.12 -0.92 6.14 31.12 0.19 -0.73 16 26 C 0.08 0.18 4.82 31.12 0.15 0.33 16 27 H 0.09 0.36 7.63 -2.39 -0.02 0.35 16 28 O -0.57 -1.06 13.67 -148.98 -2.04 -3.10 16 29 C -0.13 0.73 7.21 31.12 0.22 0.95 16 30 H 0.42 -3.90 8.47 -92.70 -0.79 -4.69 16 31 H 0.41 -1.28 8.93 -92.71 -0.83 -2.11 16 32 H 0.43 -5.34 6.76 -92.71 -0.63 -5.96 16 33 H 0.11 1.02 7.65 -2.91 -0.02 1.00 16 34 H 0.07 0.03 7.59 -2.39 -0.02 0.02 16 35 H 0.10 -0.39 7.62 -2.38 -0.02 -0.41 16 36 H 0.13 1.17 8.06 -2.92 -0.02 1.15 16 37 H 0.09 -0.18 7.96 -2.39 -0.02 -0.20 16 38 H 0.40 -3.29 8.74 -74.06 -0.65 -3.94 16 39 H -0.30 -2.03 7.05 99.48 0.70 -1.33 16 40 H -0.28 -1.16 7.11 99.48 0.71 -0.45 16 41 H 0.12 0.73 4.86 -2.91 -0.01 0.72 16 42 H 0.15 -0.17 8.06 -2.91 -0.02 -0.19 16 43 H 0.15 -0.20 6.30 -2.91 -0.02 -0.22 16 44 H 0.15 -1.20 8.06 -2.91 -0.02 -1.22 16 45 H 0.17 -2.36 8.06 -2.91 -0.02 -2.38 16 46 H 0.17 -2.66 6.42 -2.91 -0.02 -2.68 16 47 H 0.06 0.86 7.63 -2.39 -0.02 0.85 16 48 H 0.10 0.78 8.14 -2.39 -0.02 0.76 16 49 H 0.40 -2.98 9.12 -74.05 -0.68 -3.66 16 50 H 0.13 -1.33 8.14 -2.39 -0.02 -1.35 16 51 H 0.11 -1.02 8.10 -2.39 -0.02 -1.04 16 Total: 0.00 -40.04 428.25 -5.11 -45.14 By element: Atomic # 1 Polarization: -24.53 SS G_CDS: -2.47 Total: -27.00 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 3.85 Total: 7.44 kcal Atomic # 7 Polarization: 4.49 SS G_CDS: -3.54 Total: 0.95 kcal Atomic # 8 Polarization: -23.08 SS G_CDS: -4.99 Total: -28.07 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: 2.05 Total: 1.53 kcal Total: -40.04 -5.11 -45.14 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549630.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.703 kcal (2) G-P(sol) polarization free energy of solvation -40.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.739 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.143 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds