Wall clock time and date at job start Sat Mar 6 2021 22:41:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.36545 * 126.64704 * 2 1 4 4 C 1.46655 * 125.98623 * 0.02581 * 3 2 1 5 5 O 1.21702 * 120.00069 * 359.97438 * 4 3 2 6 6 N 1.34773 * 120.00167 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00108 * 174.99413 * 6 4 3 8 8 C 1.50691 * 112.85215 * 293.52881 * 7 6 4 9 9 N 1.34774 * 119.99931 * 323.90263 * 8 7 6 10 10 O 1.21285 * 120.00480 * 143.89833 * 8 7 6 11 11 C 1.53784 * 113.61359 * 162.22074 * 7 6 4 12 12 C 1.53781 * 87.08417 * 220.01983 * 11 7 6 13 13 H 1.09003 * 113.69391 * 270.87934 * 12 11 7 14 14 O 1.42897 * 113.61605 * 139.97924 * 12 11 7 15 15 C 1.53783 * 87.07937 * 25.43494 * 12 11 7 16 16 O 1.34915 * 108.03005 * 179.75975 * 3 2 1 17 17 C 1.33930 * 109.37910 * 0.43754 * 16 3 2 18 18 C 1.50700 * 125.61552 * 179.82666 * 17 16 3 19 19 O 1.42902 * 109.46934 * 269.69267 * 18 17 16 20 20 C 1.35904 * 116.99623 * 180.02562 * 19 18 17 21 21 C 1.38732 * 120.05152 * 179.97438 * 20 19 18 22 22 C 1.38149 * 119.94255 * 179.97438 * 21 20 19 23 23 C 1.38261 * 120.05643 * 0.02562 * 22 21 20 24 24 C 1.50696 * 119.94787 * 180.02562 * 23 22 21 25 25 O 1.42900 * 109.46856 * 299.99710 * 24 23 22 26 26 Si 1.86294 * 109.47480 * 179.97438 * 24 23 22 27 27 C 1.38273 * 120.10970 * 0.27090 * 23 22 21 28 28 C 1.38141 * 120.05610 * 359.45730 * 27 23 22 29 29 C 1.35128 * 108.76991 * 359.56044 * 17 16 3 30 30 H 1.09000 * 109.47441 * 269.99613 * 1 2 3 31 31 H 1.09002 * 109.47334 * 29.99570 * 1 2 3 32 32 H 1.09008 * 109.47163 * 149.99633 * 1 2 3 33 33 H 0.97008 * 120.00136 * 354.98796 * 6 4 3 34 34 H 0.97001 * 120.00346 * 354.97391 * 9 8 7 35 35 H 0.97008 * 120.00353 * 174.97502 * 9 8 7 36 36 H 1.09003 * 113.61921 * 334.56687 * 11 7 6 37 37 H 1.08998 * 113.61340 * 105.47241 * 11 7 6 38 38 H 0.96704 * 113.99734 * 82.51087 * 14 12 11 39 39 H 1.09007 * 113.61381 * 220.01866 * 15 12 11 40 40 H 1.08991 * 113.69076 * 89.12766 * 15 12 11 41 41 H 1.09003 * 109.47455 * 149.69182 * 18 17 16 42 42 H 1.08997 * 109.47403 * 29.68832 * 18 17 16 43 43 H 1.08004 * 120.03105 * 359.95677 * 21 20 19 44 44 H 1.07999 * 119.96905 * 179.97438 * 22 21 20 45 45 H 1.09002 * 109.47200 * 59.99407 * 24 23 22 46 46 H 0.96703 * 114.00325 * 179.97438 * 25 24 23 47 47 H 1.48504 * 110.00255 * 59.99824 * 26 24 23 48 48 H 1.48502 * 110.00374 * 181.31837 * 26 24 23 49 49 H 1.08001 * 119.96823 * 179.73129 * 27 23 22 50 50 H 1.07998 * 120.02793 * 180.26866 * 28 27 23 51 51 H 1.08004 * 126.44395 * 180.28560 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3219 1.0955 0.0000 4 6 1.8842 2.4952 0.0005 5 8 0.6966 2.7614 0.0006 6 7 2.7970 3.4868 -0.0001 7 6 2.3632 4.8817 -0.1102 8 6 1.7423 5.1977 -1.4464 9 7 2.2222 4.6207 -2.5658 10 8 0.8106 5.9712 -1.5146 11 6 3.4322 5.8959 0.3297 12 6 2.2932 6.6925 0.9877 13 1 1.8248 7.4179 0.3224 14 8 2.6423 7.2483 2.2570 15 6 1.5266 5.3631 1.0871 16 8 3.6005 0.6648 0.0054 17 6 3.6183 -0.6743 -0.0009 18 6 4.8550 -1.5355 -0.0015 19 8 5.2455 -1.8073 -1.3490 20 6 6.3508 -2.5777 -1.5275 21 6 6.7862 -2.8814 -2.8092 22 6 7.9104 -3.6643 -2.9882 23 6 8.6010 -4.1453 -1.8912 24 6 9.8273 -4.9985 -2.0892 25 8 9.4759 -6.1752 -2.8199 26 14 10.5222 -5.4818 -0.4297 27 6 8.1655 -3.8490 -0.6128 28 6 7.0452 -3.0620 -0.4285 29 6 2.3448 -1.1262 -0.0006 30 1 -0.3634 -0.0001 1.0276 31 1 -0.3634 0.8900 -0.5138 32 1 -0.3634 -0.8900 -0.5139 33 1 3.7413 3.2768 0.0726 34 1 3.0122 4.0595 -2.5219 35 1 1.7777 4.7666 -3.4157 36 1 4.1507 5.4915 1.0427 37 1 3.9069 6.4180 -0.5011 38 1 3.1246 8.0846 2.2010 39 1 0.4628 5.4550 0.8677 40 1 1.7231 4.8121 2.0067 41 1 4.6448 -2.4737 0.5122 42 1 5.6620 -1.0130 0.5122 43 1 6.2467 -2.5065 -3.6665 44 1 8.2495 -3.9014 -3.9857 45 1 10.5759 -4.4350 -2.6461 46 1 10.2185 -6.7723 -2.9848 47 1 9.5113 -6.2505 0.3400 48 1 11.7501 -6.2970 -0.6110 49 1 8.7042 -4.2295 0.2425 50 1 6.7080 -2.8272 0.5703 51 1 2.0307 -2.1595 -0.0004 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549632.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:22 Heat of formation + Delta-G solvation = -112.009229 kcal Electronic energy + Delta-G solvation = -37476.370827 eV Core-core repulsion = 32310.724451 eV Total energy + Delta-G solvation = -5165.646375 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.160 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.96934 -42.34688 -41.25116 -40.15219 -39.14584 -39.03852 -37.36804 -36.60542 -35.32893 -34.91505 -34.08727 -33.13966 -32.03122 -31.59885 -28.97317 -28.49430 -27.13596 -26.44110 -26.06973 -24.18742 -23.43175 -22.70083 -22.41503 -22.07742 -20.89071 -20.50095 -19.46228 -19.42727 -19.14282 -18.53949 -18.43301 -17.77120 -17.72933 -17.48043 -16.97781 -16.81144 -16.76252 -16.46458 -16.06969 -15.99025 -15.75546 -15.61662 -15.42057 -15.24159 -14.83710 -14.69880 -14.46120 -14.32620 -14.14965 -14.08107 -13.93153 -13.82969 -13.72559 -13.60237 -13.48700 -13.40084 -13.35925 -12.86943 -12.65003 -12.49015 -12.12527 -11.91519 -11.86090 -11.73195 -11.62408 -11.29781 -11.02958 -10.84841 -10.82822 -10.47404 -10.47144 -10.00935 -9.76437 -9.19796 -4.91684 -0.30921 0.29312 0.33794 0.92868 1.14876 1.32998 1.33303 1.61866 1.79647 1.84776 1.97065 2.26241 2.36466 2.64334 3.05388 3.18714 3.25537 3.40433 3.43441 3.56011 3.59302 3.61118 3.76909 3.79060 3.84822 4.00585 4.03666 4.09773 4.11682 4.27141 4.32204 4.42560 4.45505 4.49444 4.51414 4.58032 4.58406 4.67811 4.71904 4.73314 4.77493 4.84357 4.93867 4.99567 5.04791 5.12296 5.18353 5.27491 5.30316 5.53632 5.61537 5.67792 5.70673 6.14464 6.23098 6.30384 6.60552 6.78893 6.83257 7.07616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C -0.092 4.092 3 C -0.091 4.091 4 C 0.605 3.395 5 O -0.531 6.531 6 N -0.690 5.690 7 C 0.130 3.870 8 C 0.533 3.467 9 N -0.831 5.831 10 O -0.569 6.569 11 C -0.132 4.132 12 C 0.083 3.917 13 H 0.088 0.912 14 O -0.569 6.569 15 C -0.115 4.115 16 O -0.153 6.153 17 C 0.019 3.981 18 C 0.134 3.866 19 O -0.324 6.324 20 C 0.126 3.874 21 C -0.161 4.161 22 C -0.063 4.063 23 C -0.124 4.124 24 C -0.083 4.083 25 O -0.560 6.560 26 Si 0.763 3.237 27 C -0.080 4.080 28 C -0.200 4.200 29 C -0.190 4.190 30 H 0.079 0.921 31 H 0.068 0.932 32 H 0.085 0.915 33 H 0.426 0.574 34 H 0.414 0.586 35 H 0.411 0.589 36 H 0.131 0.869 37 H 0.105 0.895 38 H 0.400 0.600 39 H 0.063 0.937 40 H 0.098 0.902 41 H 0.126 0.874 42 H 0.109 0.891 43 H 0.135 0.865 44 H 0.134 0.866 45 H 0.093 0.907 46 H 0.394 0.606 47 H -0.298 1.298 48 H -0.291 1.291 49 H 0.147 0.853 50 H 0.162 0.838 51 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.509 -1.468 1.064 10.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.095 4.095 3 C -0.143 4.143 4 C 0.393 3.607 5 O -0.409 6.409 6 N -0.345 5.345 7 C 0.039 3.961 8 C 0.316 3.684 9 N -0.394 5.394 10 O -0.447 6.447 11 C -0.170 4.170 12 C 0.024 3.976 13 H 0.106 0.894 14 O -0.377 6.377 15 C -0.154 4.154 16 O -0.049 6.049 17 C -0.033 4.033 18 C 0.060 3.940 19 O -0.239 6.239 20 C 0.081 3.919 21 C -0.180 4.180 22 C -0.081 4.081 23 C -0.124 4.124 24 C -0.191 4.191 25 O -0.370 6.370 26 Si 0.669 3.331 27 C -0.097 4.097 28 C -0.219 4.219 29 C -0.209 4.209 30 H 0.098 0.902 31 H 0.086 0.914 32 H 0.104 0.896 33 H 0.266 0.734 34 H 0.245 0.755 35 H 0.243 0.757 36 H 0.149 0.851 37 H 0.124 0.876 38 H 0.251 0.749 39 H 0.082 0.918 40 H 0.117 0.883 41 H 0.144 0.856 42 H 0.127 0.873 43 H 0.153 0.847 44 H 0.152 0.848 45 H 0.111 0.889 46 H 0.244 0.756 47 H -0.225 1.225 48 H -0.218 1.218 49 H 0.164 0.836 50 H 0.180 0.820 51 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 8.551 -1.347 1.797 8.841 hybrid contribution 0.529 -1.016 -1.517 1.901 sum 9.080 -2.363 0.280 9.387 Atomic orbital electron populations 1.20449 0.87811 1.03705 1.03329 1.20931 0.98220 0.91482 0.98859 1.21606 0.81881 0.94217 1.16605 1.16670 0.85549 0.82312 0.76171 1.90935 1.16995 1.82549 1.50452 1.45598 1.10905 1.03605 1.74423 1.21471 0.99904 0.82239 0.92455 1.20246 0.82174 0.79548 0.86468 1.43631 1.33567 1.52203 1.10004 1.90768 1.29670 1.37055 1.87187 1.23955 0.96318 0.94399 1.02377 1.23081 0.95126 0.93748 0.85690 0.89407 1.86491 1.78861 1.43910 1.28457 1.23227 0.99666 0.95835 0.96691 1.83955 1.27592 1.22358 1.71014 1.22360 0.96765 0.80314 1.03902 1.21270 0.91839 0.98098 0.82787 1.86101 1.42269 1.66347 1.29134 1.19042 0.86508 0.91799 0.94556 1.20627 0.98962 1.02872 0.95535 1.20930 0.93383 0.94328 0.99423 1.19432 0.98383 1.00747 0.93859 1.24972 0.98386 0.87970 1.07793 1.86546 1.40399 1.34213 1.75856 0.94275 0.75764 0.86885 0.76186 1.21000 0.95645 0.96806 0.96292 1.21459 0.98194 1.03076 0.99143 1.21873 0.91074 1.01137 1.06795 0.90201 0.91356 0.89580 0.73447 0.75526 0.75731 0.85062 0.87617 0.74926 0.91781 0.88324 0.85621 0.87260 0.84734 0.84787 0.88882 0.75600 1.22528 1.21845 0.83573 0.82044 0.80257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.31 9.82 71.23 0.70 0.39 16 2 C -0.09 -0.32 6.20 -19.74 -0.12 -0.44 16 3 C -0.09 -0.31 7.13 24.07 0.17 -0.14 16 4 C 0.61 2.97 7.44 86.44 0.64 3.61 16 5 O -0.53 -6.54 13.78 -4.36 -0.06 -6.60 16 6 N -0.69 1.21 4.78 -427.86 -2.05 -0.84 16 7 C 0.13 0.13 1.05 3.38 0.00 0.13 16 8 C 0.53 2.92 6.61 87.65 0.58 3.50 16 9 N -0.83 1.32 8.78 -173.54 -1.52 -0.20 16 10 O -0.57 -8.24 16.21 -3.05 -0.05 -8.29 16 11 C -0.13 0.67 7.21 31.12 0.22 0.89 16 12 C 0.08 0.11 4.82 31.12 0.15 0.26 16 13 H 0.09 0.28 7.63 -2.39 -0.02 0.26 16 14 O -0.57 -0.60 13.67 -148.98 -2.04 -2.64 16 15 C -0.12 -0.70 6.14 31.12 0.19 -0.50 16 16 O -0.15 0.00 10.41 -5.05 -0.05 -0.05 16 17 C 0.02 -0.03 6.94 24.97 0.17 0.14 16 18 C 0.13 -0.88 5.27 71.24 0.38 -0.50 16 19 O -0.32 0.18 10.12 -92.47 -0.94 -0.75 16 20 C 0.13 -0.04 6.69 22.51 0.15 0.11 16 21 C -0.16 -0.19 9.99 22.37 0.22 0.03 16 22 C -0.06 -0.07 9.60 22.25 0.21 0.14 16 23 C -0.12 -0.02 5.42 -19.85 -0.11 -0.13 16 24 C -0.08 0.18 2.81 71.23 0.20 0.38 16 25 O -0.56 -0.59 12.74 -148.98 -1.90 -2.49 16 26 Si 0.76 -2.92 29.78 68.60 2.04 -0.87 16 27 C -0.08 0.20 8.66 22.26 0.19 0.39 16 28 C -0.20 0.76 9.04 22.36 0.20 0.96 16 29 C -0.19 0.11 10.73 22.07 0.24 0.35 16 30 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 31 H 0.07 0.52 6.44 -2.39 -0.02 0.51 16 32 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 33 H 0.43 -3.34 8.47 -92.70 -0.79 -4.12 16 34 H 0.41 -2.89 8.47 -92.71 -0.79 -3.68 16 35 H 0.41 -1.06 8.93 -92.70 -0.83 -1.89 16 36 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 37 H 0.11 -0.89 8.10 -2.39 -0.02 -0.91 16 38 H 0.40 -3.21 9.12 -74.05 -0.68 -3.88 16 39 H 0.06 0.80 7.63 -2.38 -0.02 0.79 16 40 H 0.10 0.61 8.14 -2.39 -0.02 0.59 16 41 H 0.13 -1.41 7.66 -2.39 -0.02 -1.43 16 42 H 0.11 -1.17 7.66 -2.39 -0.02 -1.19 16 43 H 0.13 0.00 8.06 -2.91 -0.02 -0.03 16 44 H 0.13 -0.03 8.06 -2.91 -0.02 -0.05 16 45 H 0.09 -0.55 7.96 -2.39 -0.02 -0.57 16 46 H 0.39 -2.64 8.74 -74.06 -0.65 -3.29 16 47 H -0.30 -0.95 7.11 99.48 0.71 -0.25 16 48 H -0.29 -0.28 7.11 99.48 0.71 0.42 16 49 H 0.15 -0.96 4.87 -2.91 -0.01 -0.97 16 50 H 0.16 -1.66 6.30 -2.91 -0.02 -1.68 16 51 H 0.18 -0.90 8.06 -2.91 -0.02 -0.92 16 Total: 0.00 -31.67 430.79 -4.77 -36.44 By element: Atomic # 1 Polarization: -20.66 SS G_CDS: -2.61 Total: -23.28 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: 4.40 Total: 9.57 kcal Atomic # 7 Polarization: 2.53 SS G_CDS: -3.57 Total: -1.04 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: -5.03 Total: -20.82 kcal Atomic # 14 Polarization: -2.92 SS G_CDS: 2.04 Total: -0.87 kcal Total: -31.67 -4.77 -36.44 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549632.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.565 kcal (2) G-P(sol) polarization free energy of solvation -31.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds