Wall clock time and date at job start Sat Mar 6 2021 22:41:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21273 * 120.00356 * 2 1 4 4 C 1.50706 * 119.99775 * 179.97438 * 2 1 3 5 5 N 1.46506 * 112.85017 * 323.89914 * 4 2 1 6 6 C 1.34776 * 119.99918 * 293.53506 * 5 4 2 7 7 O 1.21616 * 120.00331 * 354.99862 * 6 5 4 8 8 C 1.47385 * 119.99930 * 175.26943 * 6 5 4 9 9 C 1.36415 * 127.19073 * 179.42944 * 8 6 5 10 10 C 1.50693 * 125.80096 * 0.04422 * 9 8 6 11 11 O 1.42898 * 109.47745 * 89.99971 * 10 9 8 12 12 C 1.35893 * 117.00665 * 179.97438 * 11 10 9 13 13 C 1.38735 * 120.05440 * 359.72819 * 12 11 10 14 14 C 1.38143 * 119.94619 * 179.74134 * 13 12 11 15 15 C 1.38274 * 120.05362 * 0.51004 * 14 13 12 16 16 C 1.50693 * 119.94293 * 179.74692 * 15 14 13 17 17 O 1.42905 * 109.46975 * 245.01733 * 16 15 14 18 18 Si 1.86300 * 109.47414 * 5.01412 * 16 15 14 19 19 C 1.38267 * 120.11009 * 359.75932 * 15 14 13 20 20 C 1.38141 * 120.05660 * 359.97438 * 19 15 14 21 21 O 1.33650 * 108.39394 * 179.89595 * 9 8 6 22 22 C 1.34222 * 110.90894 * 0.38880 * 21 9 8 23 23 C 1.34177 * 109.12234 * 359.76201 * 22 21 9 24 24 C 1.53778 * 113.61307 * 192.70601 * 4 2 1 25 25 C 1.53779 * 87.08221 * 270.79933 * 24 4 2 26 26 H 1.09004 * 113.61505 * 89.11407 * 25 24 4 27 27 O 1.42898 * 113.61409 * 219.93871 * 25 24 4 28 28 C 1.53777 * 113.69168 * 95.16854 * 4 2 1 29 29 H 0.97000 * 119.99755 * 174.97784 * 1 2 3 30 30 H 0.96998 * 120.00314 * 354.97841 * 1 2 3 31 31 H 0.96995 * 120.00020 * 113.53388 * 5 4 2 32 32 H 1.09008 * 109.46657 * 209.99384 * 10 9 8 33 33 H 1.08995 * 109.47457 * 329.99456 * 10 9 8 34 34 H 1.08000 * 120.02833 * 359.97438 * 13 12 11 35 35 H 1.07994 * 119.97642 * 180.22484 * 14 13 12 36 36 H 1.09001 * 109.47304 * 125.02047 * 16 15 14 37 37 H 0.96697 * 113.99577 * 59.99782 * 17 16 15 38 38 H 1.48504 * 110.00103 * 179.97438 * 18 16 15 39 39 H 1.48493 * 110.00005 * 301.32172 * 18 16 15 40 40 H 1.07996 * 119.96958 * 179.97438 * 19 15 14 41 41 H 1.08003 * 120.02973 * 179.97438 * 20 19 15 42 42 H 1.08001 * 125.43356 * 179.72193 * 22 21 9 43 43 H 1.08004 * 127.01951 * 179.97438 * 23 22 21 44 44 H 1.09007 * 113.61749 * 25.34939 * 24 4 2 45 45 H 1.09005 * 113.61752 * 156.24631 * 24 4 2 46 46 H 0.96708 * 113.99843 * 179.97438 * 27 25 24 47 47 H 1.09000 * 113.61427 * 203.66873 * 28 4 2 48 48 H 1.09001 * 113.61613 * 334.57830 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0502 0.0000 4 6 2.1012 -1.3052 0.0006 5 7 1.4410 -2.3429 0.7965 6 6 1.3419 -2.2057 2.1336 7 8 1.8791 -1.2672 2.6901 8 6 0.5876 -3.1964 2.9222 9 6 0.4035 -3.2070 4.2738 10 6 0.9438 -2.1894 5.2451 11 8 -0.0051 -1.1331 5.4055 12 6 0.3297 -0.1265 6.2549 13 6 1.5442 -0.1577 6.9247 14 6 1.8846 0.8694 7.7836 15 6 1.0113 1.9226 7.9839 16 6 1.3827 3.0389 8.9257 17 8 0.4850 3.0425 10.0376 18 14 3.1247 2.7836 9.5351 19 6 -0.2021 1.9532 7.3218 20 6 -0.5447 0.9313 6.4577 21 8 -0.3402 -4.2716 4.5898 22 6 -0.6534 -4.9796 3.4933 23 6 -0.1181 -4.3831 2.4172 24 6 3.5996 -1.1513 0.3104 25 6 3.8133 -0.9697 -1.2016 26 1 3.7366 0.0661 -1.5321 27 8 4.9822 -1.6254 -1.6973 28 6 2.5200 -1.7775 -1.4016 29 1 -0.4850 -0.8368 -0.0735 30 1 -0.4850 0.8368 0.0735 31 1 1.0751 -3.1287 0.3612 32 1 1.1228 -2.6664 6.2089 33 1 1.8794 -1.7823 4.8619 34 1 2.2246 -0.9823 6.7720 35 1 2.8314 0.8474 8.3025 36 1 1.3169 3.9928 8.4025 37 1 0.4907 2.2227 10.5503 38 1 3.5032 3.8784 10.4644 39 1 3.2352 1.4721 10.2226 40 1 -0.8825 2.7767 7.4803 41 1 -1.4928 0.9554 5.9411 42 1 -1.2417 -5.8852 3.4796 43 1 -0.1906 -4.7085 1.3899 44 1 3.8356 -0.2618 0.8947 45 1 4.0579 -2.0557 0.7108 46 1 5.1218 -1.5151 -2.6479 47 1 2.6832 -2.8531 -1.4694 48 1 1.8845 -1.3936 -2.1997 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4549634.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:27 Heat of formation + Delta-G solvation = -99.542545 kcal Electronic energy + Delta-G solvation = -36566.178590 eV Core-core repulsion = 31556.610430 eV Total energy + Delta-G solvation = -5009.568160 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.144 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.84056 -42.22429 -41.21125 -39.92393 -39.16563 -38.90162 -37.21250 -36.41235 -34.86396 -34.46072 -33.52089 -32.82817 -31.93384 -31.35904 -28.14730 -27.11224 -26.67958 -26.07505 -24.58014 -23.76892 -23.00727 -22.37651 -22.12717 -21.06928 -20.36895 -19.43357 -19.35356 -19.04476 -18.37309 -18.29577 -17.66030 -17.46918 -17.29541 -16.93999 -16.77430 -16.72234 -16.37430 -16.11643 -15.98092 -15.79788 -15.70189 -15.49615 -15.20380 -14.83411 -14.64002 -14.55650 -14.28625 -14.23967 -14.10611 -13.81924 -13.63050 -13.53758 -13.36445 -13.21164 -13.10237 -12.50915 -12.21234 -12.06634 -12.02459 -11.78018 -11.52600 -11.42016 -11.09589 -11.05678 -10.97297 -10.70990 -10.50858 -10.26581 -9.96705 -9.95844 -9.14532 -4.89370 -0.05996 0.37111 0.38985 0.82448 1.30920 1.35511 1.45741 1.63801 1.88840 2.01000 2.03288 2.33475 2.46748 2.73399 3.06953 3.18454 3.20979 3.40792 3.46070 3.49696 3.55643 3.59742 3.72686 3.78328 3.81748 3.89958 3.95437 4.10109 4.13470 4.22496 4.34997 4.37985 4.45758 4.50495 4.53136 4.59958 4.65067 4.74609 4.74805 4.89792 5.00494 5.02168 5.08084 5.20287 5.22899 5.33966 5.56752 5.71295 5.75519 5.75677 6.17951 6.27539 6.34277 6.47547 6.61888 7.00756 7.17693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.539 3.461 3 O -0.523 6.523 4 C 0.129 3.871 5 N -0.710 5.710 6 C 0.590 3.410 7 O -0.514 6.514 8 C -0.212 4.212 9 C 0.069 3.931 10 C 0.134 3.866 11 O -0.304 6.304 12 C 0.142 3.858 13 C -0.202 4.202 14 C -0.076 4.076 15 C -0.155 4.155 16 C -0.070 4.070 17 O -0.531 6.531 18 Si 0.683 3.317 19 C -0.051 4.051 20 C -0.148 4.148 21 O -0.164 6.164 22 C -0.013 4.013 23 C -0.197 4.197 24 C -0.103 4.103 25 C 0.082 3.918 26 H 0.097 0.903 27 O -0.554 6.554 28 C -0.157 4.157 29 H 0.400 0.600 30 H 0.406 0.594 31 H 0.406 0.594 32 H 0.084 0.916 33 H 0.117 0.883 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.117 0.883 37 H 0.375 0.625 38 H -0.257 1.257 39 H -0.261 1.261 40 H 0.133 0.867 41 H 0.132 0.868 42 H 0.215 0.785 43 H 0.163 0.837 44 H 0.096 0.904 45 H 0.101 0.899 46 H 0.382 0.618 47 H 0.110 0.890 48 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.210 -6.856 -5.286 8.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.409 5.409 2 C 0.321 3.679 3 O -0.397 6.397 4 C 0.039 3.961 5 N -0.365 5.365 6 C 0.377 3.623 7 O -0.389 6.389 8 C -0.217 4.217 9 C 0.016 3.984 10 C 0.059 3.941 11 O -0.218 6.218 12 C 0.097 3.903 13 C -0.220 4.220 14 C -0.093 4.093 15 C -0.156 4.156 16 C -0.180 4.180 17 O -0.337 6.337 18 Si 0.585 3.415 19 C -0.069 4.069 20 C -0.167 4.167 21 O -0.059 6.059 22 C -0.080 4.080 23 C -0.216 4.216 24 C -0.142 4.142 25 C 0.022 3.978 26 H 0.115 0.885 27 O -0.359 6.359 28 C -0.196 4.196 29 H 0.228 0.772 30 H 0.237 0.763 31 H 0.242 0.758 32 H 0.102 0.898 33 H 0.135 0.865 34 H 0.149 0.851 35 H 0.147 0.853 36 H 0.135 0.865 37 H 0.223 0.777 38 H -0.182 1.182 39 H -0.186 1.186 40 H 0.151 0.849 41 H 0.150 0.850 42 H 0.231 0.769 43 H 0.180 0.820 44 H 0.114 0.886 45 H 0.119 0.881 46 H 0.229 0.771 47 H 0.129 0.871 48 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -1.078 -5.366 -3.605 6.554 hybrid contribution -1.694 -1.235 -0.394 2.133 sum -2.772 -6.601 -4.000 8.201 Atomic orbital electron populations 1.43703 1.06981 1.13206 1.77049 1.19930 0.82814 0.89963 0.75196 1.90784 1.68097 1.32318 1.48506 1.21530 0.93536 0.86824 0.94256 1.45650 1.60931 1.23501 1.06444 1.17248 0.79234 0.84221 0.81551 1.90863 1.45772 1.32070 1.70214 1.21131 1.07690 0.99780 0.93053 1.21969 0.94612 0.88580 0.93227 1.21126 0.91962 0.84014 0.96977 1.86071 1.43979 1.30844 1.60876 1.18945 0.93600 0.88120 0.89602 1.21175 0.97179 1.01833 1.01834 1.20830 0.98504 0.92905 0.97097 1.20161 0.96221 0.97593 1.01632 1.24938 1.04458 1.00315 0.88248 1.86598 1.62653 1.42189 1.42267 0.94930 0.79266 0.79830 0.87457 1.20826 0.95546 0.97241 0.93316 1.20475 1.00434 0.93508 1.02274 1.83816 1.54062 1.31695 1.36356 1.24082 1.02445 0.98615 0.82822 1.22884 1.02372 0.95727 1.00588 1.23215 0.90411 1.04986 0.95548 1.23214 0.83508 0.95626 0.95455 0.88550 1.86539 1.44509 1.76093 1.28747 1.24017 0.98990 1.03141 0.93402 0.77159 0.76265 0.75759 0.89842 0.86544 0.85058 0.85284 0.86488 0.77745 1.18238 1.18580 0.84884 0.84965 0.76890 0.81990 0.88557 0.88055 0.77075 0.87140 0.89781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.81 8.78 31.22 0.27 1.09 16 2 C 0.54 1.16 6.61 -10.98 -0.07 1.09 16 3 O -0.52 -3.25 16.21 5.56 0.09 -3.16 16 4 C 0.13 -0.01 1.05 -132.16 -0.14 -0.15 16 5 N -0.71 1.21 4.78 -49.00 -0.23 0.98 16 6 C 0.59 0.78 7.46 -12.54 -0.09 0.69 16 7 O -0.51 -2.47 13.89 5.26 0.07 -2.40 16 8 C -0.21 -0.07 6.31 -103.28 -0.65 -0.72 16 9 C 0.07 0.09 7.00 -34.97 -0.24 -0.16 16 10 C 0.13 0.17 4.74 36.00 0.17 0.34 16 11 O -0.30 -1.02 10.12 -19.40 -0.20 -1.22 16 12 C 0.14 0.43 6.69 -39.21 -0.26 0.16 16 13 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 14 C -0.08 -0.09 8.66 -39.60 -0.34 -0.43 16 15 C -0.16 -0.23 5.35 -104.60 -0.56 -0.79 16 16 C -0.07 -0.06 2.80 36.00 0.10 0.04 16 17 O -0.53 -1.11 12.83 -35.23 -0.45 -1.57 16 18 Si 0.68 0.06 29.88 -169.99 -5.08 -5.02 16 19 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 20 C -0.15 -0.38 9.99 -39.43 -0.39 -0.77 16 21 O -0.16 -0.07 10.52 7.64 0.08 0.01 16 22 C -0.01 0.03 12.03 29.30 0.35 0.39 16 23 C -0.20 0.53 10.60 -37.46 -0.40 0.13 16 24 C -0.10 -0.19 6.14 -25.92 -0.16 -0.35 16 25 C 0.08 0.02 4.82 -25.92 -0.12 -0.11 16 26 H 0.10 0.08 7.63 -51.93 -0.40 -0.32 16 27 O -0.55 -0.18 13.67 -35.23 -0.48 -0.66 16 28 C -0.16 0.36 7.22 -25.92 -0.19 0.18 16 29 H 0.40 -1.41 8.47 -40.82 -0.35 -1.76 16 30 H 0.41 -0.54 8.93 -40.82 -0.36 -0.91 16 31 H 0.41 -1.97 7.89 -40.82 -0.32 -2.29 16 32 H 0.08 -0.06 7.65 -51.92 -0.40 -0.46 16 33 H 0.12 0.19 6.02 -51.93 -0.31 -0.13 16 34 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 35 H 0.13 -0.08 4.83 -52.49 -0.25 -0.33 16 36 H 0.12 0.03 7.96 -51.93 -0.41 -0.39 16 37 H 0.38 -0.27 8.70 45.56 0.40 0.13 16 38 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 39 H -0.26 -0.45 7.00 56.52 0.40 -0.05 16 40 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 41 H 0.13 0.21 8.06 -52.48 -0.42 -0.21 16 42 H 0.21 -1.35 8.06 -52.49 -0.42 -1.78 16 43 H 0.16 -0.97 7.75 -52.48 -0.41 -1.38 16 44 H 0.10 0.42 7.63 -51.92 -0.40 0.02 16 45 H 0.10 0.20 8.14 -51.93 -0.42 -0.23 16 46 H 0.38 -1.50 9.12 45.56 0.42 -1.08 16 47 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 48 H 0.08 -0.28 8.10 -51.93 -0.42 -0.70 16 LS Contribution 408.44 15.07 6.16 6.16 Total: 0.00 -12.85 408.44 -8.38 -21.23 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -4.87 Total: -13.79 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -3.75 Total: -1.65 kcal Atomic # 7 Polarization: 2.02 SS G_CDS: 0.04 Total: 2.06 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -0.89 Total: -8.99 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.08 Total: -5.02 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -12.85 -8.38 -21.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549634.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.311 kcal (2) G-P(sol) polarization free energy of solvation -12.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds