Wall clock time and date at job start Sat Mar 6 2021 22:41:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21273 * 120.00356 * 2 1 4 4 C 1.50706 * 119.99775 * 179.97438 * 2 1 3 5 5 N 1.46506 * 112.85017 * 323.89914 * 4 2 1 6 6 C 1.34776 * 119.99918 * 293.53506 * 5 4 2 7 7 O 1.21616 * 120.00331 * 354.99862 * 6 5 4 8 8 C 1.47385 * 119.99930 * 175.26943 * 6 5 4 9 9 C 1.36415 * 127.19073 * 179.42944 * 8 6 5 10 10 C 1.50693 * 125.80096 * 0.04422 * 9 8 6 11 11 O 1.42898 * 109.47745 * 89.99971 * 10 9 8 12 12 C 1.35893 * 117.00665 * 179.97438 * 11 10 9 13 13 C 1.38735 * 120.05440 * 359.72819 * 12 11 10 14 14 C 1.38143 * 119.94619 * 179.74134 * 13 12 11 15 15 C 1.38274 * 120.05362 * 0.51004 * 14 13 12 16 16 C 1.50693 * 119.94293 * 179.74692 * 15 14 13 17 17 O 1.42905 * 109.46975 * 245.01733 * 16 15 14 18 18 Si 1.86300 * 109.47414 * 5.01412 * 16 15 14 19 19 C 1.38267 * 120.11009 * 359.75932 * 15 14 13 20 20 C 1.38141 * 120.05660 * 359.97438 * 19 15 14 21 21 O 1.33650 * 108.39394 * 179.89595 * 9 8 6 22 22 C 1.34222 * 110.90894 * 0.38880 * 21 9 8 23 23 C 1.34177 * 109.12234 * 359.76201 * 22 21 9 24 24 C 1.53778 * 113.61307 * 192.70601 * 4 2 1 25 25 C 1.53779 * 87.08221 * 270.79933 * 24 4 2 26 26 H 1.09004 * 113.61505 * 89.11407 * 25 24 4 27 27 O 1.42898 * 113.61409 * 219.93871 * 25 24 4 28 28 C 1.53777 * 113.69168 * 95.16854 * 4 2 1 29 29 H 0.97000 * 119.99755 * 174.97784 * 1 2 3 30 30 H 0.96998 * 120.00314 * 354.97841 * 1 2 3 31 31 H 0.96995 * 120.00020 * 113.53388 * 5 4 2 32 32 H 1.09008 * 109.46657 * 209.99384 * 10 9 8 33 33 H 1.08995 * 109.47457 * 329.99456 * 10 9 8 34 34 H 1.08000 * 120.02833 * 359.97438 * 13 12 11 35 35 H 1.07994 * 119.97642 * 180.22484 * 14 13 12 36 36 H 1.09001 * 109.47304 * 125.02047 * 16 15 14 37 37 H 0.96697 * 113.99577 * 59.99782 * 17 16 15 38 38 H 1.48504 * 110.00103 * 179.97438 * 18 16 15 39 39 H 1.48493 * 110.00005 * 301.32172 * 18 16 15 40 40 H 1.07996 * 119.96958 * 179.97438 * 19 15 14 41 41 H 1.08003 * 120.02973 * 179.97438 * 20 19 15 42 42 H 1.08001 * 125.43356 * 179.72193 * 22 21 9 43 43 H 1.08004 * 127.01951 * 179.97438 * 23 22 21 44 44 H 1.09007 * 113.61749 * 25.34939 * 24 4 2 45 45 H 1.09005 * 113.61752 * 156.24631 * 24 4 2 46 46 H 0.96708 * 113.99843 * 179.97438 * 27 25 24 47 47 H 1.09000 * 113.61427 * 203.66873 * 28 4 2 48 48 H 1.09001 * 113.61613 * 334.57830 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0502 0.0000 4 6 2.1012 -1.3052 0.0006 5 7 1.4410 -2.3429 0.7965 6 6 1.3419 -2.2057 2.1336 7 8 1.8791 -1.2672 2.6901 8 6 0.5876 -3.1964 2.9222 9 6 0.4035 -3.2070 4.2738 10 6 0.9438 -2.1894 5.2451 11 8 -0.0051 -1.1331 5.4055 12 6 0.3297 -0.1265 6.2549 13 6 1.5442 -0.1577 6.9247 14 6 1.8846 0.8694 7.7836 15 6 1.0113 1.9226 7.9839 16 6 1.3827 3.0389 8.9257 17 8 0.4850 3.0425 10.0376 18 14 3.1247 2.7836 9.5351 19 6 -0.2021 1.9532 7.3218 20 6 -0.5447 0.9313 6.4577 21 8 -0.3402 -4.2716 4.5898 22 6 -0.6534 -4.9796 3.4933 23 6 -0.1181 -4.3831 2.4172 24 6 3.5996 -1.1513 0.3104 25 6 3.8133 -0.9697 -1.2016 26 1 3.7366 0.0661 -1.5321 27 8 4.9822 -1.6254 -1.6973 28 6 2.5200 -1.7775 -1.4016 29 1 -0.4850 -0.8368 -0.0735 30 1 -0.4850 0.8368 0.0735 31 1 1.0751 -3.1287 0.3612 32 1 1.1228 -2.6664 6.2089 33 1 1.8794 -1.7823 4.8619 34 1 2.2246 -0.9823 6.7720 35 1 2.8314 0.8474 8.3025 36 1 1.3169 3.9928 8.4025 37 1 0.4907 2.2227 10.5503 38 1 3.5032 3.8784 10.4644 39 1 3.2352 1.4721 10.2226 40 1 -0.8825 2.7767 7.4803 41 1 -1.4928 0.9554 5.9411 42 1 -1.2417 -5.8852 3.4796 43 1 -0.1906 -4.7085 1.3899 44 1 3.8356 -0.2618 0.8947 45 1 4.0579 -2.0557 0.7108 46 1 5.1218 -1.5151 -2.6479 47 1 2.6832 -2.8531 -1.4694 48 1 1.8845 -1.3936 -2.1997 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549634.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:26 Heat of formation + Delta-G solvation = -109.806487 kcal Electronic energy + Delta-G solvation = -36566.623668 eV Core-core repulsion = 31556.610430 eV Total energy + Delta-G solvation = -5010.013238 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.144 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.73655 -42.28481 -41.33452 -40.05138 -39.28912 -38.99213 -37.33798 -36.46400 -34.92277 -34.48048 -33.50478 -32.82119 -32.02295 -31.42670 -28.14235 -27.11647 -26.71040 -26.16520 -24.60993 -23.84721 -23.00644 -22.44775 -22.10237 -21.05538 -20.43455 -19.55109 -19.29177 -19.04997 -18.42010 -18.36723 -17.71601 -17.50938 -17.24649 -17.02728 -16.83306 -16.77622 -16.42824 -16.18206 -16.04074 -15.89371 -15.77405 -15.58563 -15.32701 -14.87244 -14.71936 -14.62515 -14.42491 -14.22612 -13.98579 -13.70965 -13.65113 -13.56041 -13.48563 -13.32063 -13.10848 -12.61097 -12.36220 -12.18204 -12.10939 -11.81414 -11.65165 -11.56043 -11.15103 -10.99675 -10.95765 -10.80914 -10.61376 -10.31930 -10.09385 -9.84658 -9.29334 -4.93256 -0.06896 0.22535 0.25397 1.03292 1.24112 1.29597 1.50066 1.56217 1.88232 1.91736 2.02101 2.30668 2.44201 2.59556 3.10417 3.23022 3.33022 3.41957 3.42387 3.55058 3.60467 3.65158 3.67365 3.75249 3.83913 3.86612 3.91411 4.08897 4.14376 4.24989 4.38045 4.45494 4.51233 4.54856 4.60511 4.62281 4.65381 4.77049 4.80701 4.86039 4.91319 4.93443 5.10047 5.19679 5.20974 5.29710 5.43215 5.64273 5.69711 5.88219 6.21182 6.22485 6.35395 6.48045 6.84482 7.01670 7.12600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.831 5.831 2 C 0.532 3.468 3 O -0.573 6.573 4 C 0.133 3.867 5 N -0.688 5.688 6 C 0.586 3.414 7 O -0.556 6.556 8 C -0.219 4.219 9 C 0.042 3.958 10 C 0.133 3.867 11 O -0.320 6.320 12 C 0.125 3.875 13 C -0.207 4.207 14 C -0.079 4.079 15 C -0.158 4.158 16 C -0.077 4.077 17 O -0.548 6.548 18 Si 0.759 3.241 19 C -0.058 4.058 20 C -0.162 4.162 21 O -0.179 6.179 22 C -0.014 4.014 23 C -0.190 4.190 24 C -0.114 4.114 25 C 0.081 3.919 26 H 0.085 0.915 27 O -0.569 6.569 28 C -0.131 4.131 29 H 0.415 0.585 30 H 0.408 0.592 31 H 0.426 0.574 32 H 0.097 0.903 33 H 0.106 0.894 34 H 0.146 0.854 35 H 0.147 0.853 36 H 0.123 0.877 37 H 0.386 0.614 38 H -0.301 1.301 39 H -0.278 1.278 40 H 0.141 0.859 41 H 0.135 0.865 42 H 0.251 0.749 43 H 0.199 0.801 44 H 0.059 0.941 45 H 0.098 0.902 46 H 0.399 0.601 47 H 0.134 0.866 48 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.092 -9.185 -6.804 11.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.315 3.685 3 O -0.451 6.451 4 C 0.042 3.958 5 N -0.345 5.345 6 C 0.375 3.625 7 O -0.435 6.435 8 C -0.224 4.224 9 C -0.011 4.011 10 C 0.058 3.942 11 O -0.235 6.235 12 C 0.080 3.920 13 C -0.225 4.225 14 C -0.096 4.096 15 C -0.158 4.158 16 C -0.186 4.186 17 O -0.356 6.356 18 Si 0.664 3.336 19 C -0.076 4.076 20 C -0.181 4.181 21 O -0.074 6.074 22 C -0.079 4.079 23 C -0.209 4.209 24 C -0.153 4.153 25 C 0.021 3.979 26 H 0.102 0.898 27 O -0.377 6.377 28 C -0.169 4.169 29 H 0.246 0.754 30 H 0.240 0.760 31 H 0.266 0.734 32 H 0.115 0.885 33 H 0.124 0.876 34 H 0.164 0.836 35 H 0.165 0.835 36 H 0.141 0.859 37 H 0.235 0.765 38 H -0.229 1.229 39 H -0.204 1.204 40 H 0.158 0.842 41 H 0.153 0.847 42 H 0.267 0.733 43 H 0.217 0.783 44 H 0.078 0.922 45 H 0.117 0.883 46 H 0.250 0.750 47 H 0.152 0.848 48 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.020 -7.765 -5.183 9.552 hybrid contribution -1.437 -0.523 0.090 1.532 sum -3.457 -8.289 -5.093 10.324 Atomic orbital electron populations 1.43614 1.06155 1.14207 1.75417 1.20336 0.83570 0.90116 0.74487 1.90759 1.69212 1.34143 1.50994 1.21357 0.92051 0.86478 0.95869 1.45425 1.59984 1.23633 1.05417 1.17519 0.78822 0.83854 0.82323 1.90855 1.47538 1.33874 1.71198 1.21248 1.07729 1.00555 0.92890 1.21991 0.96124 0.89323 0.93711 1.21145 0.91346 0.83784 0.97898 1.86036 1.44910 1.31399 1.61109 1.19166 0.94299 0.88400 0.90087 1.21408 0.97050 1.02502 1.01578 1.21053 0.99123 0.92525 0.96914 1.20274 0.96136 0.97840 1.01560 1.25132 1.04953 1.00438 0.88047 1.86566 1.63166 1.43191 1.42682 0.94024 0.77448 0.76612 0.85469 1.20969 0.96013 0.97306 0.93270 1.20632 1.00773 0.93879 1.02792 1.83806 1.54080 1.31692 1.37842 1.24946 1.01905 0.99066 0.81985 1.23287 1.01184 0.94057 1.02362 1.23202 0.92381 1.03167 0.96560 1.23094 0.84924 0.95741 0.94108 0.89762 1.86491 1.44666 1.75996 1.30566 1.23941 0.96972 1.04017 0.92015 0.75428 0.75989 0.73440 0.88458 0.87581 0.83609 0.83549 0.85929 0.76525 1.22867 1.20435 0.84152 0.84744 0.73300 0.78349 0.92202 0.88339 0.74983 0.84842 0.87784 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 1.54 8.78 -173.53 -1.52 0.01 16 2 C 0.53 2.82 6.61 87.66 0.58 3.40 16 3 O -0.57 -8.53 16.21 -3.01 -0.05 -8.58 16 4 C 0.13 -0.01 1.05 3.38 0.00 0.00 16 5 N -0.69 2.86 4.78 -427.17 -2.04 0.82 16 6 C 0.59 1.89 7.46 86.65 0.65 2.54 16 7 O -0.56 -6.63 13.89 -4.08 -0.06 -6.69 16 8 C -0.22 -0.12 6.31 -18.99 -0.12 -0.24 16 9 C 0.04 0.14 7.00 25.26 0.18 0.31 16 10 C 0.13 0.59 4.74 71.23 0.34 0.92 16 11 O -0.32 -2.83 10.12 -92.35 -0.93 -3.77 16 12 C 0.13 0.99 6.69 22.51 0.15 1.14 16 13 C -0.21 -0.97 9.04 22.37 0.20 -0.77 16 14 C -0.08 -0.23 8.66 22.26 0.19 -0.04 16 15 C -0.16 -0.59 5.35 -19.85 -0.11 -0.70 16 16 C -0.08 -0.17 2.80 71.23 0.20 0.03 16 17 O -0.55 -2.56 12.83 -148.98 -1.91 -4.47 16 18 Si 0.76 0.38 29.88 68.60 2.05 2.43 16 19 C -0.06 -0.29 9.68 22.25 0.22 -0.08 16 20 C -0.16 -1.13 9.99 22.37 0.22 -0.91 16 21 O -0.18 -0.12 10.52 4.42 0.05 -0.08 16 22 C -0.01 0.10 12.03 66.89 0.80 0.90 16 23 C -0.19 1.45 10.60 23.65 0.25 1.70 16 24 C -0.11 -0.63 6.14 31.12 0.19 -0.44 16 25 C 0.08 0.08 4.82 31.12 0.15 0.23 16 26 H 0.08 0.27 7.63 -2.38 -0.02 0.25 16 27 O -0.57 -0.30 13.67 -148.98 -2.04 -2.34 16 28 C -0.13 0.81 7.22 31.12 0.22 1.04 16 29 H 0.41 -3.39 8.47 -92.71 -0.79 -4.17 16 30 H 0.41 -0.90 8.93 -92.71 -0.83 -1.73 16 31 H 0.43 -5.19 7.89 -92.71 -0.73 -5.93 16 32 H 0.10 0.02 7.65 -2.38 -0.02 0.00 16 33 H 0.11 0.63 6.02 -2.39 -0.01 0.61 16 34 H 0.15 0.12 6.30 -2.91 -0.02 0.10 16 35 H 0.15 -0.18 4.83 -2.91 -0.01 -0.20 16 36 H 0.12 0.10 7.96 -2.39 -0.02 0.08 16 37 H 0.39 -0.37 8.70 -74.06 -0.64 -1.02 16 38 H -0.30 -2.36 7.11 99.48 0.71 -1.65 16 39 H -0.28 -0.94 7.00 99.48 0.70 -0.24 16 40 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 41 H 0.13 0.72 8.06 -2.91 -0.02 0.69 16 42 H 0.25 -3.97 8.06 -2.91 -0.02 -3.99 16 43 H 0.20 -3.18 7.75 -2.91 -0.02 -3.20 16 44 H 0.06 0.76 7.63 -2.38 -0.02 0.74 16 45 H 0.10 0.53 8.14 -2.38 -0.02 0.52 16 46 H 0.40 -3.38 9.12 -74.05 -0.68 -4.05 16 47 H 0.13 -1.38 8.14 -2.39 -0.02 -1.40 16 48 H 0.10 -0.97 8.10 -2.39 -0.02 -0.99 16 Total: 0.00 -34.15 408.44 -4.67 -38.82 By element: Atomic # 1 Polarization: -22.66 SS G_CDS: -2.53 Total: -25.19 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 4.32 Total: 9.04 kcal Atomic # 7 Polarization: 4.40 SS G_CDS: -3.57 Total: 0.83 kcal Atomic # 8 Polarization: -20.98 SS G_CDS: -4.94 Total: -25.93 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.05 Total: 2.43 kcal Total: -34.15 -4.67 -38.82 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549634.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.990 kcal (2) G-P(sol) polarization free energy of solvation -34.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds