Wall clock time and date at job start Sat Mar 6 2021 22:41:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35994 * 116.99957 * 2 1 4 4 C 1.39163 * 120.07036 * 180.02562 * 3 2 1 5 5 O 1.35984 * 120.07171 * 0.02562 * 4 3 2 6 6 C 1.42903 * 117.00158 * 179.72772 * 5 4 3 7 7 C 1.50700 * 109.47336 * 180.02562 * 6 5 4 8 8 O 1.21280 * 120.00050 * 359.97438 * 7 6 5 9 9 N 1.34780 * 119.99896 * 179.97438 * 7 6 5 10 10 C 1.46498 * 120.00029 * 174.99410 * 9 7 6 11 11 C 1.50693 * 112.85048 * 298.27378 * 10 9 7 12 12 N 1.34777 * 120.00198 * 325.26301 * 11 10 9 13 13 O 1.21279 * 120.00034 * 145.54051 * 11 10 9 14 14 C 1.53786 * 113.61402 * 167.07332 * 10 9 7 15 15 C 1.53783 * 87.08134 * 270.80474 * 14 10 9 16 16 H 1.08994 * 113.61201 * 220.02135 * 15 14 10 17 17 O 1.42897 * 113.61684 * 89.19956 * 15 14 10 18 18 C 1.53778 * 113.61097 * 69.46921 * 10 9 7 19 19 C 1.38562 * 119.85067 * 179.72853 * 4 3 2 20 20 C 1.38239 * 120.00182 * 0.27309 * 19 4 3 21 21 N 1.48003 * 119.92658 * 180.02562 * 20 19 4 22 22 O 1.21799 * 120.00333 * 0.02562 * 21 20 19 23 23 O 1.21802 * 120.00019 * 180.02562 * 21 20 19 24 24 C 1.38254 * 120.14766 * 0.02562 * 20 19 4 25 25 C 1.50699 * 119.92725 * 179.97438 * 24 20 19 26 26 O 1.42898 * 109.46796 * 75.00509 * 25 24 20 27 27 Si 1.86298 * 109.46987 * 195.00256 * 25 24 20 28 28 C 1.38241 * 120.14622 * 359.97438 * 24 20 19 29 29 H 1.08995 * 109.47595 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46897 * 299.99825 * 1 2 3 31 31 H 1.09003 * 109.47709 * 59.99464 * 1 2 3 32 32 H 1.08993 * 109.47175 * 59.99281 * 6 5 4 33 33 H 1.09006 * 109.46389 * 299.99841 * 6 5 4 34 34 H 0.96999 * 119.99783 * 354.99861 * 9 7 6 35 35 H 0.96998 * 120.00093 * 175.36093 * 12 11 10 36 36 H 0.97006 * 119.99646 * 355.35626 * 12 11 10 37 37 H 1.09005 * 113.61140 * 25.34885 * 14 10 9 38 38 H 1.08991 * 113.61426 * 156.25252 * 14 10 9 39 39 H 0.96701 * 114.00225 * 179.97438 * 17 15 14 40 40 H 1.08995 * 113.61504 * 203.74699 * 18 10 9 41 41 H 1.08999 * 113.61918 * 334.65055 * 18 10 9 42 42 H 1.08003 * 119.99821 * 180.30102 * 19 4 3 43 43 H 1.09000 * 109.47246 * 315.00681 * 25 24 20 44 44 H 0.96699 * 114.00165 * 59.99678 * 26 25 24 45 45 H 1.48504 * 109.99961 * 58.68753 * 27 25 24 46 46 H 1.48504 * 109.99661 * 180.02562 * 27 25 24 47 47 H 1.07995 * 120.00191 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1794 0.1477 -0.0016 6 6 5.6003 0.3005 -0.0081 7 6 6.2518 -1.0584 -0.0090 8 8 5.5668 -2.0593 -0.0040 9 7 7.5956 -1.1614 -0.0153 10 6 8.2299 -2.4774 0.0945 11 6 7.9044 -3.1777 1.3885 12 7 7.7525 -2.4637 2.5215 13 8 7.7841 -4.3843 1.4115 14 6 9.7308 -2.4677 -0.2402 15 6 9.3265 -2.7276 -1.7010 16 1 9.9765 -3.4361 -2.2144 17 8 9.1023 -1.5340 -2.4539 18 6 8.0359 -3.3604 -1.1495 19 6 4.0603 2.5233 -0.0062 20 6 3.3030 3.6798 -0.0057 21 7 3.9716 5.0002 -0.0123 22 8 5.1877 5.0670 -0.0188 23 8 3.3056 6.0200 -0.0113 24 6 1.9225 3.6057 0.0011 25 6 1.1018 4.8696 0.0023 26 8 1.1285 5.4561 -1.3005 27 14 -0.6571 4.4675 0.4663 28 6 1.2932 2.3748 0.0068 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 5.9104 0.8521 0.8793 33 1 5.9025 0.8485 -0.9006 34 1 8.1427 -0.3642 -0.0926 35 1 7.4771 -2.9055 3.3400 36 1 7.9185 -1.5080 2.5184 37 1 10.2066 -1.4994 -0.0845 38 1 10.2844 -3.2901 0.2126 39 1 8.8481 -1.6910 -3.3736 40 1 8.1253 -4.4274 -0.9458 41 1 7.1455 -3.1119 -1.7269 42 1 5.1386 2.5839 -0.0116 43 1 1.5169 5.5717 0.7254 44 1 0.7732 4.8858 -1.9959 45 1 -0.6954 3.8279 1.8060 46 1 -1.4770 5.7057 0.4705 47 1 0.2147 2.3197 0.0117 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4549636.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:31 Heat of formation + Delta-G solvation = -138.079065 kcal Electronic energy + Delta-G solvation = -38946.519999 eV Core-core repulsion = 33488.942756 eV Total energy + Delta-G solvation = -5457.577243 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.139 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.26434 -42.41117 -42.04823 -40.54269 -39.52660 -39.26963 -39.07051 -37.58405 -37.09822 -36.24278 -34.80963 -34.02287 -32.73476 -32.57526 -30.06675 -29.02879 -27.89559 -27.16889 -26.87222 -25.78269 -24.01592 -23.24229 -22.59934 -22.01249 -20.80730 -20.44868 -19.73605 -19.60255 -19.19764 -18.81517 -18.59559 -18.47883 -17.99863 -17.95350 -17.84287 -17.74336 -17.38937 -17.02877 -16.74738 -16.50705 -16.16409 -15.92990 -15.71334 -15.66409 -15.39029 -15.30489 -15.04233 -14.74563 -14.43450 -14.14778 -13.98803 -13.92966 -13.69122 -13.54574 -13.20093 -13.16532 -12.75708 -12.61631 -12.60071 -12.55057 -12.30306 -12.22350 -11.96515 -11.90613 -11.69471 -11.43329 -11.19166 -10.94883 -10.72166 -10.60877 -10.55845 -10.19185 -9.57045 -5.29294 -1.25397 -0.54461 0.29208 0.40546 0.97003 1.01118 1.26267 1.42294 1.49416 1.68567 1.80846 1.83337 2.09872 2.41042 2.76677 2.87502 3.03929 3.15378 3.15678 3.26626 3.32919 3.39247 3.42821 3.52618 3.58397 3.64967 3.76235 3.79318 3.82819 3.92196 3.94093 4.13321 4.16146 4.22146 4.36382 4.41139 4.44801 4.51681 4.62746 4.63565 4.71435 4.93044 5.15874 5.38812 5.45084 5.72234 5.88000 6.09768 6.25214 6.41998 6.45013 6.75898 6.88685 7.18894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.033 3.967 7 C 0.518 3.482 8 O -0.494 6.494 9 N -0.698 5.698 10 C 0.134 3.866 11 C 0.532 3.468 12 N -0.850 5.850 13 O -0.528 6.528 14 C -0.118 4.118 15 C 0.082 3.918 16 H 0.082 0.918 17 O -0.550 6.550 18 C -0.152 4.152 19 C -0.118 4.118 20 C -0.025 4.025 21 N 0.032 4.968 22 O -0.173 6.173 23 O -0.129 6.129 24 C -0.042 4.042 25 C -0.074 4.074 26 O -0.515 6.515 27 Si 0.674 3.326 28 C -0.177 4.177 29 H 0.114 0.886 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.100 0.900 33 H 0.102 0.898 34 H 0.411 0.589 35 H 0.404 0.596 36 H 0.399 0.601 37 H 0.094 0.906 38 H 0.118 0.882 39 H 0.387 0.613 40 H 0.114 0.886 41 H 0.087 0.913 42 H 0.166 0.834 43 H 0.139 0.861 44 H 0.374 0.626 45 H -0.252 1.252 46 H -0.242 1.242 47 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.345 -0.886 -1.731 1.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.045 4.045 7 C 0.302 3.698 8 O -0.365 6.365 9 N -0.355 5.355 10 C 0.044 3.956 11 C 0.314 3.686 12 N -0.413 5.413 13 O -0.402 6.402 14 C -0.156 4.156 15 C 0.022 3.978 16 H 0.099 0.901 17 O -0.356 6.356 18 C -0.191 4.191 19 C -0.138 4.138 20 C -0.109 4.109 21 N 0.551 4.449 22 O -0.384 6.384 23 O -0.350 6.350 24 C -0.044 4.044 25 C -0.184 4.184 26 O -0.319 6.319 27 Si 0.574 3.426 28 C -0.196 4.196 29 H 0.132 0.868 30 H 0.083 0.917 31 H 0.087 0.913 32 H 0.118 0.882 33 H 0.120 0.880 34 H 0.248 0.752 35 H 0.235 0.765 36 H 0.227 0.773 37 H 0.113 0.887 38 H 0.136 0.864 39 H 0.235 0.765 40 H 0.132 0.868 41 H 0.106 0.894 42 H 0.184 0.816 43 H 0.156 0.844 44 H 0.220 0.780 45 H -0.176 1.176 46 H -0.166 1.166 47 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.425 -2.583 -0.403 2.978 hybrid contribution 0.804 1.299 0.077 1.529 sum -0.621 -1.285 -0.326 1.464 Atomic orbital electron populations 1.23422 0.76770 1.05803 1.02183 1.86348 1.22518 1.24211 1.86472 1.18456 0.89043 0.85908 0.94356 1.17840 0.88398 0.85293 1.02315 1.86333 1.16740 1.26059 1.88463 1.22615 0.80296 0.96844 1.04769 1.19899 0.82327 0.90389 0.77192 1.90860 1.62387 1.37603 1.45683 1.45357 1.05732 1.08439 1.76006 1.21440 0.95781 0.84633 0.93731 1.20358 0.75578 0.87481 0.85174 1.43789 1.72296 1.12809 1.12392 1.90772 1.49585 1.13918 1.85912 1.23327 0.92071 1.05122 0.95031 1.22695 0.95919 0.87127 0.92049 0.90060 1.86373 1.91475 1.30261 1.27503 1.23962 0.99846 1.00832 0.94491 1.20799 1.02196 0.88959 1.01802 1.20397 0.91975 0.83162 1.15392 1.43378 1.00984 1.02606 0.97925 1.94541 0.95787 1.93715 1.54346 1.94579 1.64452 1.24053 1.51880 1.20104 0.91615 0.97057 0.95673 1.25466 1.08450 0.93273 0.91218 1.86713 1.86486 1.43415 1.15252 0.95569 0.76396 0.85274 0.85358 1.20902 1.00513 0.89595 1.08549 0.86769 0.91727 0.91338 0.88214 0.87982 0.75226 0.76490 0.77320 0.88703 0.86419 0.76476 0.86772 0.89406 0.81619 0.84403 0.77967 1.17645 1.16570 0.82026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.02 10.28 -34.23 -0.35 -0.37 16 3 C 0.17 -0.07 6.70 -39.12 -0.26 -0.33 16 4 C 0.11 0.01 6.70 -39.12 -0.26 -0.25 16 5 O -0.26 -0.30 9.45 -47.32 -0.45 -0.75 16 6 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 7 C 0.52 0.04 7.46 -10.98 -0.08 -0.04 16 8 O -0.49 -2.57 15.22 -14.35 -0.22 -2.79 16 9 N -0.70 1.80 4.17 -47.93 -0.20 1.60 16 10 C 0.13 -0.09 0.95 -132.16 -0.12 -0.21 16 11 C 0.53 1.10 6.48 -10.99 -0.07 1.02 16 12 N -0.85 0.98 8.78 31.22 0.27 1.25 16 13 O -0.53 -3.39 16.76 5.56 0.09 -3.30 16 14 C -0.12 0.33 7.18 -25.91 -0.19 0.14 16 15 C 0.08 -0.20 5.28 -25.82 -0.14 -0.33 16 16 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 17 O -0.55 1.44 13.10 -35.23 -0.46 0.98 16 18 C -0.15 -0.04 6.71 -25.83 -0.17 -0.21 16 19 C -0.12 0.06 8.54 -39.46 -0.34 -0.28 16 20 C -0.03 -0.03 6.85 -79.95 -0.55 -0.58 16 21 N 0.03 0.12 4.45 33.96 0.15 0.28 16 22 O -0.17 -0.78 18.44 -29.46 -0.54 -1.32 16 23 O -0.13 -0.67 14.62 -35.96 -0.53 -1.19 16 24 C -0.04 0.02 5.26 -104.62 -0.55 -0.53 16 25 C -0.07 0.02 1.74 36.01 0.06 0.09 16 26 O -0.51 -0.07 11.80 -55.47 -0.65 -0.73 16 27 Si 0.67 -1.58 29.91 -169.99 -5.08 -6.67 16 28 C -0.18 0.38 7.65 -39.46 -0.30 0.08 16 29 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 30 H 0.06 -0.35 7.65 -51.93 -0.40 -0.75 16 31 H 0.07 -0.43 7.68 -51.93 -0.40 -0.83 16 32 H 0.10 -0.52 7.66 -51.93 -0.40 -0.92 16 33 H 0.10 -0.48 7.66 -51.93 -0.40 -0.88 16 34 H 0.41 -2.21 8.64 -40.82 -0.35 -2.56 16 35 H 0.40 -0.57 8.93 -40.82 -0.36 -0.94 16 36 H 0.40 -1.60 8.43 -40.82 -0.34 -1.94 16 37 H 0.09 -0.40 8.09 -51.93 -0.42 -0.82 16 38 H 0.12 -0.36 8.09 -51.93 -0.42 -0.78 16 39 H 0.39 -2.12 9.12 45.56 0.42 -1.70 16 40 H 0.11 0.17 7.34 -51.93 -0.38 -0.22 16 41 H 0.09 0.16 7.56 -51.93 -0.39 -0.24 16 42 H 0.17 -0.42 5.85 -52.48 -0.31 -0.73 16 43 H 0.14 0.19 6.07 -51.93 -0.32 -0.12 16 44 H 0.37 -1.64 8.70 45.56 0.40 -1.25 16 45 H -0.25 0.08 7.11 56.52 0.40 0.49 16 46 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 47 H 0.16 -0.83 3.36 -52.49 -0.18 -1.01 16 LS Contribution 400.84 15.07 6.04 6.04 Total: 0.00 -16.09 400.84 -8.02 -24.10 By element: Atomic # 1 Polarization: -12.46 SS G_CDS: -4.30 Total: -16.75 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -1.79 Total: -0.38 kcal Atomic # 7 Polarization: 2.90 SS G_CDS: 0.23 Total: 3.13 kcal Atomic # 8 Polarization: -6.36 SS G_CDS: -3.11 Total: -9.47 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.08 Total: -6.67 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -16.09 -8.02 -24.10 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549636.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.977 kcal (2) G-P(sol) polarization free energy of solvation -16.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds