Wall clock time and date at job start Sat Mar 6 2021 22:41:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34789 * 1 3 3 O 1.21277 * 120.00165 * 2 1 4 4 C 1.50702 * 119.99605 * 180.28342 * 2 1 3 5 5 N 1.46500 * 112.85385 * 46.05352 * 4 2 1 6 6 C 1.34773 * 119.99824 * 57.49118 * 5 4 2 7 7 O 1.21280 * 120.00153 * 354.88914 * 6 5 4 8 8 C 1.50707 * 119.99763 * 174.88752 * 6 5 4 9 9 O 1.42898 * 109.46752 * 180.02562 * 8 6 5 10 10 C 1.35909 * 116.99745 * 180.02562 * 9 8 6 11 11 C 1.38709 * 120.05200 * 359.97438 * 10 9 8 12 12 C 1.38170 * 119.94017 * 179.97438 * 11 10 9 13 13 C 1.38240 * 120.05582 * 359.97438 * 12 11 10 14 14 C 1.50706 * 119.94365 * 180.02562 * 13 12 11 15 15 O 1.42894 * 109.47530 * 119.99723 * 14 13 12 16 16 Si 1.86298 * 109.47107 * 359.97438 * 14 13 12 17 17 C 1.38287 * 120.11525 * 0.02562 * 13 12 11 18 18 C 1.38122 * 120.05370 * 359.74415 * 17 13 12 19 19 N 1.48001 * 120.03054 * 180.27456 * 18 17 13 20 20 O 1.21804 * 120.00015 * 0.21527 * 19 18 17 21 21 O 1.21801 * 119.99901 * 180.21184 * 19 18 17 22 22 C 1.53777 * 113.61029 * 274.85621 * 4 2 1 23 23 C 1.53787 * 87.08166 * 270.88746 * 22 4 2 24 24 H 1.08995 * 113.61448 * 89.11762 * 23 22 4 25 25 O 1.42899 * 113.61268 * 220.02394 * 23 22 4 26 26 C 1.53778 * 113.60899 * 177.36035 * 4 2 1 27 27 H 0.96996 * 119.99775 * 354.99342 * 1 2 3 28 28 H 0.96991 * 120.00017 * 174.99918 * 1 2 3 29 29 H 0.96994 * 119.99730 * 237.49960 * 5 4 2 30 30 H 1.08996 * 109.46922 * 299.99798 * 8 6 5 31 31 H 1.08994 * 109.47164 * 60.00434 * 8 6 5 32 32 H 1.07991 * 120.03244 * 359.96087 * 11 10 9 33 33 H 1.08000 * 119.97250 * 180.02562 * 12 11 10 34 34 H 1.09002 * 109.46588 * 239.99617 * 14 13 12 35 35 H 0.96698 * 114.00323 * 300.00011 * 15 14 13 36 36 H 1.48495 * 110.00059 * 180.02562 * 16 14 13 37 37 H 1.48499 * 110.00127 * 301.32268 * 16 14 13 38 38 H 1.07996 * 119.97313 * 180.02562 * 17 13 12 39 39 H 1.08992 * 113.61721 * 25.43396 * 22 4 2 40 40 H 1.09000 * 113.61663 * 156.34100 * 22 4 2 41 41 H 0.96705 * 113.99766 * 179.97438 * 25 23 22 42 42 H 1.09007 * 113.61052 * 203.66088 * 26 4 2 43 43 H 1.08997 * 113.62155 * 334.56159 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3479 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1013 -1.3052 -0.0065 5 7 1.5744 -2.2615 -0.9832 6 6 1.5104 -1.9267 -2.2871 7 8 1.8012 -0.8034 -2.6398 8 6 1.0774 -2.9484 -3.3069 9 8 1.0907 -2.3577 -4.6081 10 6 0.7229 -3.1502 -5.6491 11 6 0.3574 -4.4690 -5.4230 12 6 -0.0167 -5.2724 -6.4830 13 6 -0.0272 -4.7628 -7.7680 14 6 -0.4362 -5.6412 -8.9223 15 8 -1.5758 -5.0744 -9.5718 16 14 -0.8630 -7.3404 -8.2888 17 6 0.3368 -3.4483 -7.9961 18 6 0.7069 -2.6397 -6.9393 19 7 1.0905 -1.2312 -7.1833 20 8 1.0762 -0.7836 -8.3160 21 8 1.4205 -0.5197 -6.2514 22 6 2.3059 -1.9051 1.3946 23 6 3.6091 -1.0918 1.4666 24 1 3.4764 -0.0896 1.8739 25 8 4.6927 -1.7995 2.0724 26 6 3.6282 -1.1345 -0.0705 27 1 -0.4849 0.8368 0.0733 28 1 -0.4850 -0.8368 -0.0732 29 1 1.2715 -3.1355 -0.6914 30 1 1.7627 -3.7957 -3.2859 31 1 0.0692 -3.2904 -3.0731 32 1 0.3653 -4.8675 -4.4193 33 1 -0.3018 -6.2992 -6.3075 34 1 0.3875 -5.7147 -9.6324 35 1 -2.3485 -4.9790 -8.9983 36 1 -1.2673 -8.2165 -9.4175 37 1 0.3046 -7.9276 -7.5836 38 1 0.3273 -3.0524 -9.0008 39 1 1.5543 -1.5904 2.1184 40 1 2.4641 -2.9836 1.3889 41 1 5.5153 -1.2932 2.1202 42 1 4.1479 -2.0024 -0.4768 43 1 3.9442 -0.1977 -0.5294 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549638.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:33 Heat of formation + Delta-G solvation = -127.651198 kcal Electronic energy + Delta-G solvation = -33749.756620 eV Core-core repulsion = 28766.851374 eV Total energy + Delta-G solvation = -4982.905246 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.124 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.30158 -42.37579 -41.64752 -40.31636 -39.31957 -38.98846 -37.60572 -37.37518 -36.45597 -34.81526 -34.15550 -33.45279 -32.23643 -29.99215 -27.83534 -27.05542 -26.77254 -26.15898 -24.15996 -23.22688 -22.77603 -21.66003 -20.57037 -20.46812 -19.77946 -19.42279 -19.00153 -18.64422 -18.45143 -18.34342 -18.12431 -17.80797 -17.55751 -17.08922 -16.82135 -16.33617 -16.12700 -15.89216 -15.78600 -15.67862 -15.41310 -15.21954 -14.82273 -14.71880 -14.09085 -13.92112 -13.81074 -13.68899 -13.54855 -13.37779 -13.23179 -12.72410 -12.55888 -12.36233 -12.29102 -12.26066 -12.19912 -11.94296 -11.89080 -11.45889 -11.19957 -10.88129 -10.83637 -10.79337 -10.56193 -10.32117 -9.79057 -4.99258 -1.32998 -0.24250 0.14612 0.34702 1.03188 1.27233 1.33323 1.45562 1.64816 2.03099 2.05939 2.19662 2.32254 3.10391 3.14005 3.17196 3.25813 3.33568 3.39395 3.50044 3.56768 3.70104 3.71399 3.79320 3.83646 3.93024 4.01740 4.11715 4.29120 4.35789 4.51278 4.55941 4.63437 4.65431 4.75960 4.84280 4.84501 4.89473 5.07241 5.17374 5.19633 5.73486 5.75732 6.26181 6.37385 6.39240 6.73922 6.74452 7.06644 7.18110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.831 5.831 2 C 0.532 3.468 3 O -0.579 6.579 4 C 0.135 3.865 5 N -0.687 5.687 6 C 0.504 3.496 7 O -0.549 6.549 8 C 0.026 3.974 9 O -0.293 6.293 10 C 0.195 3.805 11 C -0.186 4.186 12 C -0.004 4.004 13 C -0.150 4.150 14 C -0.084 4.084 15 O -0.558 6.558 16 Si 0.803 3.197 17 C -0.005 4.005 18 C -0.105 4.105 19 N 0.035 4.965 20 O -0.205 6.205 21 O -0.176 6.176 22 C -0.095 4.095 23 C 0.079 3.921 24 H 0.078 0.922 25 O -0.565 6.565 26 C -0.161 4.161 27 H 0.408 0.592 28 H 0.416 0.584 29 H 0.434 0.566 30 H 0.147 0.853 31 H 0.156 0.844 32 H 0.211 0.789 33 H 0.190 0.810 34 H 0.108 0.892 35 H 0.398 0.602 36 H -0.308 1.308 37 H -0.262 1.262 38 H 0.147 0.853 39 H 0.104 0.896 40 H 0.139 0.861 41 H 0.397 0.603 42 H 0.110 0.890 43 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.539 -16.389 8.665 20.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.315 3.685 3 O -0.457 6.457 4 C 0.044 3.956 5 N -0.347 5.347 6 C 0.290 3.710 7 O -0.424 6.424 8 C -0.051 4.051 9 O -0.204 6.204 10 C 0.145 3.855 11 C -0.204 4.204 12 C -0.021 4.021 13 C -0.151 4.151 14 C -0.192 4.192 15 O -0.367 6.367 16 Si 0.706 3.294 17 C -0.024 4.024 18 C -0.190 4.190 19 N 0.544 4.456 20 O -0.413 6.413 21 O -0.389 6.389 22 C -0.133 4.133 23 C 0.019 3.981 24 H 0.096 0.904 25 O -0.372 6.372 26 C -0.200 4.200 27 H 0.239 0.761 28 H 0.247 0.753 29 H 0.276 0.724 30 H 0.164 0.836 31 H 0.173 0.827 32 H 0.228 0.772 33 H 0.207 0.793 34 H 0.125 0.875 35 H 0.248 0.752 36 H -0.236 1.236 37 H -0.188 1.188 38 H 0.165 0.835 39 H 0.123 0.877 40 H 0.157 0.843 41 H 0.247 0.753 42 H 0.128 0.872 43 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -6.753 -16.714 8.032 19.735 hybrid contribution 0.747 1.892 -1.008 2.270 sum -6.006 -14.822 7.024 17.467 Atomic orbital electron populations 1.43575 1.06024 1.14212 1.75594 1.20350 0.83646 0.90231 0.74301 1.90758 1.69365 1.34602 1.50963 1.21316 0.93829 0.88000 0.92452 1.45432 1.65869 1.19096 1.04299 1.20759 0.77541 0.88740 0.83931 1.90946 1.47693 1.23514 1.80265 1.23146 1.07968 0.95429 0.78545 1.86477 1.80316 1.38440 1.15126 1.18954 0.90451 0.91302 0.84809 1.21847 1.05079 0.89188 1.04302 1.21738 0.89348 1.01225 0.89812 1.20463 1.04280 0.93161 0.97236 1.25507 0.91297 1.07064 0.95335 1.86531 1.23163 1.85645 1.41344 0.93814 0.84032 0.70087 0.81459 1.20832 0.90601 0.93121 0.97865 1.20884 1.20735 0.81851 0.95572 1.43946 0.97539 1.04110 1.00002 1.94506 1.59137 1.78407 1.09200 1.94686 1.50484 1.58053 1.35720 1.23336 0.95794 1.03237 0.90919 1.23071 0.88678 0.95681 0.90641 0.90365 1.86420 1.23165 1.45181 1.82475 1.23979 0.93918 1.03273 0.98820 0.76100 0.75251 0.72437 0.83598 0.82685 0.77207 0.79321 0.87471 0.75171 1.23636 1.18829 0.83488 0.87744 0.84265 0.75262 0.87194 0.92916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.41 8.85 -173.52 -1.53 0.88 16 2 C 0.53 2.74 5.67 87.66 0.50 3.24 16 3 O -0.58 -9.64 16.49 -3.02 -0.05 -9.69 16 4 C 0.13 -0.33 1.04 3.38 0.00 -0.32 16 5 N -0.69 6.78 5.05 -423.93 -2.14 4.64 16 6 C 0.50 -0.97 7.63 87.66 0.67 -0.30 16 7 O -0.55 -7.49 15.45 16.01 0.25 -7.25 16 8 C 0.03 -0.28 5.22 71.24 0.37 0.09 16 9 O -0.29 -0.66 7.68 -63.50 -0.49 -1.15 16 10 C 0.19 -0.26 6.67 22.51 0.15 -0.11 16 11 C -0.19 2.48 9.04 22.37 0.20 2.68 16 12 C 0.00 0.05 8.66 22.25 0.19 0.25 16 13 C -0.15 1.02 5.39 -19.85 -0.11 0.92 16 14 C -0.08 0.58 2.82 71.24 0.20 0.79 16 15 O -0.56 2.34 12.77 -148.98 -1.90 0.44 16 16 Si 0.80 -9.09 29.79 68.60 2.04 -7.05 16 17 C -0.01 -0.01 9.12 22.25 0.20 0.20 16 18 C -0.11 -0.64 6.87 36.48 0.25 -0.39 16 19 N 0.03 0.58 4.45 -46.24 -0.21 0.37 16 20 O -0.21 -3.90 18.45 18.88 0.35 -3.56 16 21 O -0.18 -3.85 17.24 25.61 0.44 -3.41 16 22 C -0.10 0.74 7.19 31.12 0.22 0.96 16 23 C 0.08 -0.06 4.85 31.12 0.15 0.09 16 24 H 0.08 0.17 7.97 -2.39 -0.02 0.15 16 25 O -0.56 0.67 13.67 -148.98 -2.04 -1.36 16 26 C -0.16 -0.38 6.93 31.12 0.22 -0.16 16 27 H 0.41 -1.12 8.93 -92.71 -0.83 -1.95 16 28 H 0.42 -4.49 8.63 -92.71 -0.80 -5.29 16 29 H 0.43 -8.98 8.67 -92.71 -0.80 -9.78 16 30 H 0.15 -2.82 7.66 -2.39 -0.02 -2.84 16 31 H 0.16 -3.33 7.66 -2.39 -0.02 -3.35 16 32 H 0.21 -5.11 6.30 -2.92 -0.02 -5.13 16 33 H 0.19 -4.05 4.87 -2.91 -0.01 -4.06 16 34 H 0.11 -0.50 7.96 -2.39 -0.02 -0.52 16 35 H 0.40 -5.20 8.70 -74.06 -0.64 -5.85 16 36 H -0.31 0.35 7.11 99.48 0.71 1.06 16 37 H -0.26 2.50 7.11 99.48 0.71 3.21 16 38 H 0.15 0.56 7.61 -2.91 -0.02 0.53 16 39 H 0.10 -1.04 8.09 -2.39 -0.02 -1.06 16 40 H 0.14 -1.79 8.14 -2.39 -0.02 -1.81 16 41 H 0.40 -2.81 9.12 -74.05 -0.68 -3.48 16 42 H 0.11 -0.01 8.14 -2.38 -0.02 -0.03 16 43 H 0.05 0.58 7.46 -2.39 -0.02 0.56 16 Total: 0.00 -54.26 377.10 -4.60 -58.86 By element: Atomic # 1 Polarization: -37.09 SS G_CDS: -2.54 Total: -39.63 kcal Atomic # 6 Polarization: 4.69 SS G_CDS: 3.22 Total: 7.91 kcal Atomic # 7 Polarization: 9.77 SS G_CDS: -3.88 Total: 5.89 kcal Atomic # 8 Polarization: -22.54 SS G_CDS: -3.44 Total: -25.98 kcal Atomic # 14 Polarization: -9.09 SS G_CDS: 2.04 Total: -7.05 kcal Total: -54.26 -4.60 -58.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549638.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.792 kcal (2) G-P(sol) polarization free energy of solvation -54.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -58.860 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds