Wall clock time and date at job start Sat Mar 6 2021 22:41:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21288 * 119.99641 * 2 1 4 4 C 1.50695 * 120.00465 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.84997 * 47.64768 * 4 2 1 6 6 C 1.34774 * 119.99755 * 57.30958 * 5 4 2 7 7 O 1.21277 * 120.00043 * 354.89694 * 6 5 4 8 8 C 1.50702 * 119.99748 * 174.89608 * 6 5 4 9 9 F 1.39900 * 109.47160 * 299.99676 * 8 6 5 10 10 F 1.39891 * 109.47237 * 60.00374 * 8 6 5 11 11 O 1.42903 * 109.46608 * 180.02562 * 8 6 5 12 12 C 1.35902 * 116.99688 * 180.02562 * 11 8 6 13 13 C 1.38729 * 120.05464 * 359.72248 * 12 11 8 14 14 C 1.38151 * 119.94116 * 179.70122 * 13 12 11 15 15 C 1.38258 * 120.05678 * 0.59766 * 14 13 12 16 16 C 1.50708 * 119.94613 * 179.69941 * 15 14 13 17 17 O 1.42898 * 109.46888 * 119.97652 * 16 15 14 18 18 Si 1.86298 * 109.46858 * 359.97438 * 16 15 14 19 19 C 1.38263 * 120.11222 * 359.67748 * 15 14 13 20 20 C 1.38142 * 120.05528 * 0.02562 * 19 15 14 21 21 C 1.53784 * 113.61498 * 276.45467 * 4 2 1 22 22 C 1.53782 * 87.08231 * 270.88258 * 21 4 2 23 23 H 1.08998 * 113.61343 * 89.11152 * 22 21 4 24 24 O 1.42901 * 113.61270 * 220.01838 * 22 21 4 25 25 C 1.53781 * 87.07810 * 334.56455 * 22 21 4 26 26 H 0.97005 * 119.99457 * 184.97977 * 1 2 3 27 27 H 0.96996 * 120.00529 * 4.99243 * 1 2 3 28 28 H 0.97001 * 120.00225 * 237.31148 * 5 4 2 29 29 H 1.07998 * 120.03176 * 359.97438 * 13 12 11 30 30 H 1.08006 * 119.96898 * 180.27942 * 14 13 12 31 31 H 1.08997 * 109.47114 * 239.97681 * 16 15 14 32 32 H 0.96705 * 114.00362 * 300.00243 * 17 16 15 33 33 H 1.48496 * 110.00387 * 58.67736 * 18 16 15 34 34 H 1.48496 * 109.99940 * 180.02562 * 18 16 15 35 35 H 1.08001 * 119.97752 * 180.02562 * 19 15 14 36 36 H 1.08001 * 120.02905 * 179.97438 * 20 19 15 37 37 H 1.09006 * 113.61399 * 25.42823 * 21 4 2 38 38 H 1.09000 * 113.61757 * 156.33338 * 21 4 2 39 39 H 0.96705 * 113.99371 * 179.97438 * 24 22 21 40 40 H 1.08997 * 113.61914 * 270.88341 * 25 22 21 41 41 H 1.09003 * 113.61276 * 139.97663 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3050 0.0006 5 7 1.5982 -2.2529 -0.9967 6 6 1.5621 -1.9057 -2.2985 7 8 1.8582 -0.7784 -2.6338 8 6 1.1538 -2.9181 -3.3373 9 9 2.0349 -4.0042 -3.3016 10 9 -0.1454 -3.3626 -3.0701 11 8 1.1945 -2.3148 -4.6321 12 6 0.8514 -3.0978 -5.6886 13 6 0.4887 -4.4211 -5.4839 14 6 0.1344 -5.2132 -6.5589 15 6 0.1529 -4.6917 -7.8392 16 6 -0.2275 -5.5599 -9.0108 17 8 -1.3530 -4.9890 -9.6811 18 14 -0.6661 -7.2655 -8.4031 19 6 0.5195 -3.3747 -8.0465 20 6 0.8687 -2.5768 -6.9743 21 6 2.2722 -1.9171 1.4010 22 6 3.5732 -1.1045 1.5114 23 1 3.4305 -0.1058 1.9239 24 8 4.6419 -1.8174 2.1371 25 6 3.6294 -1.1341 -0.0251 26 1 -0.4849 -0.8370 0.0729 27 1 -0.4851 0.8368 -0.0731 28 1 1.2910 -3.1305 -0.7202 29 1 0.4792 -4.8305 -4.4845 30 1 -0.1523 -6.2422 -6.3995 31 1 0.6124 -5.6255 -9.7023 32 1 -2.1389 -4.9002 -9.1246 33 1 -1.7893 -7.1866 -7.4349 34 1 -1.0426 -8.1317 -9.5489 35 1 0.5328 -2.9694 -9.0475 36 1 1.1553 -1.5482 -7.1367 37 1 1.5032 -1.6084 2.1092 38 1 2.4306 -2.9954 1.3899 39 1 5.4630 -1.3116 2.2091 40 1 4.1588 -1.9984 -0.4262 41 1 3.9560 -0.1933 -0.4682 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4549640.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:36 Heat of formation + Delta-G solvation = -220.838119 kcal Electronic energy + Delta-G solvation = -33061.849868 eV Core-core repulsion = 27967.012218 eV Total energy + Delta-G solvation = -5094.837650 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.110 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.94283 -48.90558 -42.53929 -41.41236 -40.53107 -39.33298 -39.08614 -37.39994 -36.66602 -34.89190 -34.37880 -32.47160 -32.05006 -29.35755 -27.13794 -26.80713 -26.03770 -24.55121 -23.45710 -22.70999 -22.20260 -20.69974 -20.64546 -20.02663 -19.73666 -19.15406 -18.65808 -18.40103 -17.98059 -17.60594 -17.18813 -16.95586 -16.79353 -16.46002 -16.25241 -15.93862 -15.82086 -15.76667 -15.53270 -15.44287 -15.39049 -15.21587 -15.14374 -14.95223 -14.44874 -14.41827 -14.25190 -13.95958 -13.63453 -13.55365 -13.42945 -13.05548 -12.70071 -12.43200 -12.27180 -12.02105 -11.83280 -11.66968 -11.55547 -11.00230 -10.85376 -10.65717 -10.65423 -10.20023 -9.61540 -4.92568 -0.00581 0.14177 0.26479 0.48221 1.24703 1.29774 1.59402 1.61413 1.89492 1.95892 2.19010 2.43557 2.60228 2.98196 3.11568 3.18733 3.27143 3.38396 3.52571 3.61298 3.63124 3.70438 3.70979 4.02952 4.07693 4.18886 4.38522 4.47823 4.50770 4.58287 4.60047 4.68568 4.80242 4.81520 4.88574 5.02542 5.03245 5.32738 5.35666 5.61463 5.69387 5.81601 6.19765 6.29852 6.47507 6.76471 7.07452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.831 5.831 2 C 0.534 3.466 3 O -0.566 6.566 4 C 0.126 3.874 5 N -0.667 5.667 6 C 0.515 3.485 7 O -0.493 6.493 8 C 0.439 3.561 9 F -0.166 7.166 10 F -0.166 7.166 11 O -0.306 6.306 12 C 0.086 3.914 13 C -0.191 4.191 14 C -0.076 4.076 15 C -0.138 4.138 16 C -0.079 4.079 17 O -0.547 6.547 18 Si 0.763 3.237 19 C -0.058 4.058 20 C -0.137 4.137 21 C -0.101 4.101 22 C 0.086 3.914 23 H 0.088 0.912 24 O -0.564 6.564 25 C -0.161 4.161 26 H 0.416 0.584 27 H 0.411 0.589 28 H 0.434 0.566 29 H 0.145 0.855 30 H 0.156 0.844 31 H 0.129 0.871 32 H 0.387 0.613 33 H -0.280 1.280 34 H -0.303 1.303 35 H 0.149 0.851 36 H 0.142 0.858 37 H 0.112 0.888 38 H 0.136 0.864 39 H 0.399 0.601 40 H 0.111 0.889 41 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.556 -6.238 4.877 8.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.395 5.395 2 C 0.316 3.684 3 O -0.443 6.443 4 C 0.037 3.963 5 N -0.325 5.325 6 C 0.294 3.706 7 O -0.364 6.364 8 C 0.361 3.639 9 F -0.148 7.148 10 F -0.148 7.148 11 O -0.223 6.223 12 C 0.043 3.957 13 C -0.210 4.210 14 C -0.094 4.094 15 C -0.139 4.139 16 C -0.188 4.188 17 O -0.355 6.355 18 Si 0.668 3.332 19 C -0.076 4.076 20 C -0.156 4.156 21 C -0.138 4.138 22 C 0.025 3.975 23 H 0.106 0.894 24 O -0.372 6.372 25 C -0.200 4.200 26 H 0.247 0.753 27 H 0.243 0.757 28 H 0.276 0.724 29 H 0.163 0.837 30 H 0.173 0.827 31 H 0.147 0.853 32 H 0.236 0.764 33 H -0.206 1.206 34 H -0.231 1.231 35 H 0.166 0.834 36 H 0.160 0.840 37 H 0.130 0.870 38 H 0.154 0.846 39 H 0.250 0.750 40 H 0.129 0.871 41 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -1.389 -5.743 4.253 7.280 hybrid contribution -1.174 0.818 -0.302 1.463 sum -2.564 -4.925 3.951 6.815 Atomic orbital electron populations 1.43629 1.05989 1.14473 1.75384 1.20097 0.83646 0.89792 0.74877 1.90773 1.69139 1.33889 1.50470 1.21717 0.95144 0.88039 0.91425 1.45513 1.64161 1.19710 1.03156 1.19586 0.79845 0.87384 0.83817 1.90941 1.45433 1.19992 1.80072 1.21547 0.75288 0.80870 0.86147 1.93215 1.68744 1.56500 1.96295 1.93205 1.37981 1.89890 1.93709 1.86652 1.83568 1.39312 1.12818 1.19226 0.98944 0.90687 0.86831 1.21617 1.05081 0.92451 1.01822 1.21039 0.97181 1.00100 0.91036 1.20431 1.02608 0.95764 0.95083 1.25202 0.92003 1.05474 0.96093 1.86580 1.23419 1.83625 1.41907 0.94129 0.86773 0.74073 0.78194 1.21042 0.94904 0.92753 0.98937 1.20691 1.04017 1.02008 0.88864 1.23425 0.96929 1.03324 0.90125 1.23002 0.88575 0.95734 0.90143 0.89426 1.86439 1.24283 1.44881 1.81618 1.24052 0.92480 1.04110 0.99369 0.75254 0.75658 0.72424 0.83724 0.82709 0.85295 0.76414 1.20597 1.23090 0.83375 0.84041 0.87007 0.84574 0.75010 0.87074 0.91410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.29 8.83 -173.53 -1.53 1.76 16 2 C 0.53 1.73 5.65 87.66 0.49 2.22 16 3 O -0.57 -7.32 16.54 -3.05 -0.05 -7.38 16 4 C 0.13 -0.30 1.02 3.38 0.00 -0.29 16 5 N -0.67 3.55 5.22 -423.92 -2.21 1.34 16 6 C 0.52 1.30 7.06 87.66 0.62 1.92 16 7 O -0.49 -5.72 15.44 16.02 0.25 -5.47 16 8 C 0.44 0.75 2.05 71.24 0.15 0.89 16 9 F -0.17 0.03 15.28 44.97 0.69 0.72 16 10 F -0.17 0.22 15.31 44.97 0.69 0.91 16 11 O -0.31 -2.16 9.60 -73.41 -0.71 -2.86 16 12 C 0.09 0.41 6.48 22.51 0.15 0.56 16 13 C -0.19 -0.24 8.26 22.37 0.18 -0.05 16 14 C -0.08 0.12 8.66 22.25 0.19 0.31 16 15 C -0.14 0.11 5.39 -19.85 -0.11 0.00 16 16 C -0.08 0.17 2.82 71.24 0.20 0.37 16 17 O -0.55 -0.59 12.77 -148.98 -1.90 -2.49 16 18 Si 0.76 -2.64 29.78 68.60 2.04 -0.60 16 19 C -0.06 -0.04 9.60 22.25 0.21 0.17 16 20 C -0.14 -0.45 9.99 22.37 0.22 -0.23 16 21 C -0.10 0.78 7.19 31.12 0.22 1.00 16 22 C 0.09 -0.21 4.86 31.12 0.15 -0.06 16 23 H 0.09 -0.07 8.02 -2.39 -0.02 -0.09 16 24 O -0.56 1.32 13.67 -148.98 -2.04 -0.72 16 25 C -0.16 -0.11 6.94 31.12 0.22 0.11 16 26 H 0.42 -4.39 8.80 -92.70 -0.82 -5.21 16 27 H 0.41 -1.77 8.93 -92.71 -0.83 -2.60 16 28 H 0.43 -5.59 8.67 -92.71 -0.80 -6.40 16 29 H 0.15 -0.19 5.10 -2.91 -0.01 -0.20 16 30 H 0.16 -0.98 4.87 -2.91 -0.01 -1.00 16 31 H 0.13 -0.50 7.96 -2.39 -0.02 -0.52 16 32 H 0.39 -1.68 8.70 -74.05 -0.64 -2.32 16 33 H -0.28 0.01 7.11 99.48 0.71 0.72 16 34 H -0.30 -1.39 7.11 99.48 0.71 -0.69 16 35 H 0.15 -0.22 8.06 -2.91 -0.02 -0.24 16 36 H 0.14 0.30 8.06 -2.91 -0.02 0.28 16 37 H 0.11 -1.20 8.09 -2.38 -0.02 -1.22 16 38 H 0.14 -1.55 8.14 -2.39 -0.02 -1.57 16 39 H 0.40 -3.48 9.12 -74.05 -0.68 -4.16 16 40 H 0.11 -0.10 8.14 -2.39 -0.02 -0.12 16 41 H 0.07 0.47 7.45 -2.39 -0.02 0.46 16 Total: 0.00 -28.34 360.74 -4.41 -32.74 By element: Atomic # 1 Polarization: -22.34 SS G_CDS: -2.54 Total: -24.89 kcal Atomic # 6 Polarization: 4.02 SS G_CDS: 2.91 Total: 6.93 kcal Atomic # 7 Polarization: 6.84 SS G_CDS: -3.74 Total: 3.09 kcal Atomic # 8 Polarization: -14.47 SS G_CDS: -4.45 Total: -18.91 kcal Atomic # 9 Polarization: 0.26 SS G_CDS: 1.38 Total: 1.63 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.04 Total: -0.60 kcal Total: -28.34 -4.41 -32.74 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4549640.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -188.094 kcal (2) G-P(sol) polarization free energy of solvation -28.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds