Wall clock time and date at job start Sat Mar 6 2021 22:41:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21276 * 120.00257 * 2 1 4 4 C 1.50697 * 119.99569 * 179.97438 * 2 1 3 5 5 N 1.46499 * 112.85187 * 323.91006 * 4 2 1 6 6 C 1.34774 * 120.00277 * 293.53218 * 5 4 2 7 7 O 1.21554 * 120.00018 * 354.98275 * 6 5 4 8 8 C 1.47845 * 120.00352 * 174.98088 * 6 5 4 9 9 C 1.39556 * 120.14489 * 180.02562 * 8 6 5 10 10 C 1.50699 * 120.07551 * 359.96013 * 9 8 6 11 11 O 1.42897 * 109.47054 * 179.97438 * 10 9 8 12 12 C 1.35907 * 116.99666 * 179.97438 * 11 10 9 13 13 C 1.38711 * 120.05296 * 179.72904 * 12 11 10 14 14 C 1.38174 * 119.94292 * 179.72407 * 13 12 11 15 15 C 1.50699 * 119.97305 * 180.26996 * 14 13 12 16 16 O 1.42902 * 109.46907 * 65.29834 * 15 14 13 17 17 Si 1.86298 * 109.47041 * 185.29549 * 15 14 13 18 18 C 1.38244 * 120.04974 * 0.56664 * 14 13 12 19 19 C 1.38287 * 120.11705 * 359.68438 * 18 14 13 20 20 C 1.38119 * 120.05457 * 0.04125 * 19 18 14 21 21 C 1.37978 * 119.85052 * 180.23158 * 9 8 6 22 22 C 1.38341 * 120.14805 * 359.47106 * 21 9 8 23 23 C 1.38385 * 120.28593 * 0.55671 * 22 21 9 24 24 C 1.37935 * 120.14934 * 359.69652 * 23 22 21 25 25 C 1.53788 * 113.61356 * 192.71394 * 4 2 1 26 26 C 1.53780 * 87.07926 * 270.80094 * 25 4 2 27 27 H 1.08996 * 113.61297 * 89.11691 * 26 25 4 28 28 O 1.42903 * 113.61021 * 219.93414 * 26 25 4 29 29 C 1.53778 * 87.08257 * 334.56469 * 26 25 4 30 30 H 0.97000 * 120.00142 * 174.96121 * 1 2 3 31 31 H 0.97005 * 120.00008 * 354.96241 * 1 2 3 32 32 H 0.97010 * 120.00201 * 113.53408 * 5 4 2 33 33 H 1.09008 * 109.46824 * 299.99334 * 10 9 8 34 34 H 1.08994 * 109.47074 * 59.99311 * 10 9 8 35 35 H 1.08002 * 120.03072 * 359.97438 * 13 12 11 36 36 H 1.09000 * 109.47153 * 305.29881 * 15 14 13 37 37 H 0.96694 * 114.00250 * 59.99861 * 16 15 14 38 38 H 1.48501 * 109.99851 * 58.68451 * 17 15 14 39 39 H 1.48502 * 109.99840 * 179.97438 * 17 15 14 40 40 H 1.08003 * 119.93819 * 179.70143 * 18 14 13 41 41 H 1.07998 * 119.97318 * 180.02562 * 19 18 14 42 42 H 1.07995 * 120.03153 * 179.97438 * 20 19 18 43 43 H 1.08005 * 119.92757 * 179.72826 * 21 9 8 44 44 H 1.07996 * 119.85567 * 180.27157 * 22 21 9 45 45 H 1.07999 * 119.92002 * 179.72358 * 23 22 21 46 46 H 1.07997 * 120.07433 * 179.97438 * 24 23 22 47 47 H 1.08994 * 113.61476 * 25.35259 * 25 4 2 48 48 H 1.09002 * 113.61452 * 156.25168 * 25 4 2 49 49 H 0.96701 * 113.99925 * 180.02562 * 28 26 25 50 50 H 1.09000 * 113.61572 * 270.88602 * 29 26 25 51 51 H 1.08998 * 113.61284 * 139.98210 * 29 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1011 -1.3051 0.0006 5 7 1.4408 -2.3429 0.7963 6 6 1.3415 -2.2059 2.1334 7 8 1.8786 -1.2681 2.6898 8 6 0.5794 -3.1962 2.9234 9 6 0.4743 -3.0570 4.3081 10 6 1.1386 -1.8964 5.0029 11 8 0.8869 -1.9748 6.4074 12 6 1.4202 -0.9963 7.1853 13 6 1.2108 -1.0073 8.5564 14 6 1.7588 -0.0145 9.3458 15 6 1.5368 -0.0292 10.8363 16 8 2.1729 -1.1773 11.4013 17 14 2.2607 1.5144 11.5873 18 6 2.5056 0.9957 8.7687 19 6 2.7115 1.0118 7.4013 20 6 2.1705 0.0185 6.6086 21 6 -0.2345 -3.9874 5.0400 22 6 -0.8493 -5.0505 4.4031 23 6 -0.7485 -5.1946 3.0305 24 6 -0.0386 -4.2744 2.2876 25 6 3.5996 -1.1513 0.3106 26 6 3.8134 -0.9696 -1.2014 27 1 3.7368 0.0662 -1.5318 28 8 4.9824 -1.6252 -1.6970 29 6 2.5202 -1.7774 -1.4017 30 1 -0.4850 -0.8368 -0.0738 31 1 -0.4850 0.8368 0.0738 32 1 1.0749 -3.1287 0.3608 33 1 2.2132 -1.9323 4.8235 34 1 0.7362 -0.9613 4.6136 35 1 0.6232 -1.7934 9.0071 36 1 0.4674 -0.0673 11.0440 37 1 3.1282 -1.2097 11.2548 38 1 1.6299 2.7163 10.9849 39 1 2.0477 1.5123 13.0569 40 1 2.9291 1.7734 9.3869 41 1 3.2956 1.8018 6.9529 42 1 2.3312 0.0317 5.5407 43 1 -0.3129 -3.8833 6.1122 44 1 -1.4066 -5.7735 4.9802 45 1 -1.2271 -6.0292 2.5399 46 1 0.0396 -4.3883 1.2165 47 1 3.8355 -0.2620 0.8950 48 1 4.0577 -2.0558 0.7109 49 1 5.1225 -1.5143 -2.6473 50 1 2.6833 -2.8530 -1.4696 51 1 1.8848 -1.3934 -2.1997 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4557126.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:39 Heat of formation + Delta-G solvation = -99.493486 kcal Electronic energy + Delta-G solvation = -37731.146486 eV Core-core repulsion = 32756.498886 eV Total energy + Delta-G solvation = -4974.647600 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.161 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.47828 -41.55140 -40.86142 -39.46854 -39.03877 -38.87311 -37.28863 -36.53371 -34.94092 -34.28272 -33.33667 -32.52940 -31.99751 -31.05131 -28.03852 -27.14338 -26.85825 -26.45490 -24.83683 -23.74348 -23.35442 -22.81541 -21.83034 -21.64786 -20.48249 -19.34110 -19.17738 -18.95611 -18.39177 -17.92694 -17.74050 -17.45848 -17.22991 -17.12857 -16.88581 -16.60361 -16.30880 -16.21267 -16.05502 -15.93795 -15.61791 -15.44427 -15.38210 -14.93324 -14.81935 -14.59190 -14.52103 -14.23337 -14.09515 -13.80773 -13.70469 -13.57155 -13.38154 -13.30577 -12.99242 -12.81556 -12.64293 -12.53848 -12.26338 -12.21201 -12.05745 -11.81391 -11.69991 -11.55881 -11.05126 -10.92305 -10.82862 -10.51266 -10.41445 -10.03113 -10.01757 -9.85227 -9.32934 -5.00046 -0.29907 0.13548 0.25865 0.32753 1.22588 1.27694 1.64098 1.66501 1.79922 1.89526 2.02137 2.28063 2.60198 2.71058 3.08180 3.21224 3.37759 3.43754 3.52305 3.55408 3.58959 3.63395 3.77445 3.79862 3.84869 4.01391 4.05866 4.11792 4.15799 4.17687 4.19942 4.32704 4.39879 4.42086 4.47471 4.53284 4.59826 4.60416 4.72224 4.75311 4.83004 4.87830 4.90848 4.92286 5.15721 5.18641 5.20048 5.31416 5.34253 5.37820 5.44461 5.66288 5.68354 5.81426 6.19945 6.27170 6.31470 6.73179 6.82694 6.96850 7.10989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.533 3.467 3 O -0.573 6.573 4 C 0.133 3.867 5 N -0.692 5.692 6 C 0.558 3.442 7 O -0.556 6.556 8 C -0.145 4.145 9 C -0.051 4.051 10 C 0.117 3.883 11 O -0.326 6.326 12 C 0.117 3.883 13 C -0.140 4.140 14 C -0.083 4.083 15 C -0.077 4.077 16 O -0.554 6.554 17 Si 0.785 3.215 18 C -0.153 4.153 19 C -0.076 4.076 20 C -0.211 4.211 21 C -0.124 4.124 22 C -0.088 4.088 23 C -0.121 4.121 24 C -0.071 4.071 25 C -0.115 4.115 26 C 0.080 3.920 27 H 0.084 0.916 28 O -0.569 6.569 29 C -0.132 4.132 30 H 0.416 0.584 31 H 0.409 0.591 32 H 0.425 0.575 33 H 0.075 0.925 34 H 0.073 0.927 35 H 0.128 0.872 36 H 0.107 0.893 37 H 0.396 0.604 38 H -0.286 1.286 39 H -0.296 1.296 40 H 0.152 0.848 41 H 0.150 0.850 42 H 0.128 0.872 43 H 0.129 0.871 44 H 0.150 0.850 45 H 0.164 0.836 46 H 0.168 0.832 47 H 0.059 0.941 48 H 0.097 0.903 49 H 0.399 0.601 50 H 0.134 0.866 51 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.888 -6.203 -7.368 10.056 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.316 3.684 3 O -0.451 6.451 4 C 0.043 3.957 5 N -0.348 5.348 6 C 0.347 3.653 7 O -0.435 6.435 8 C -0.148 4.148 9 C -0.052 4.052 10 C 0.042 3.958 11 O -0.241 6.241 12 C 0.072 3.928 13 C -0.159 4.159 14 C -0.084 4.084 15 C -0.187 4.187 16 O -0.362 6.362 17 Si 0.690 3.310 18 C -0.170 4.170 19 C -0.094 4.094 20 C -0.230 4.230 21 C -0.142 4.142 22 C -0.106 4.106 23 C -0.139 4.139 24 C -0.090 4.090 25 C -0.153 4.153 26 C 0.020 3.980 27 H 0.102 0.898 28 O -0.378 6.378 29 C -0.170 4.170 30 H 0.247 0.753 31 H 0.241 0.759 32 H 0.266 0.734 33 H 0.093 0.907 34 H 0.091 0.909 35 H 0.146 0.854 36 H 0.124 0.876 37 H 0.246 0.754 38 H -0.213 1.213 39 H -0.224 1.224 40 H 0.170 0.830 41 H 0.168 0.832 42 H 0.146 0.854 43 H 0.147 0.853 44 H 0.168 0.832 45 H 0.182 0.818 46 H 0.186 0.814 47 H 0.078 0.922 48 H 0.115 0.885 49 H 0.250 0.750 50 H 0.152 0.848 51 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -2.812 -4.718 -5.717 7.928 hybrid contribution -1.121 -0.101 -0.832 1.399 sum -3.932 -4.820 -6.549 9.032 Atomic orbital electron populations 1.43618 1.06090 1.14280 1.75400 1.20305 0.83592 0.90033 0.74515 1.90765 1.69237 1.34133 1.50982 1.21350 0.91992 0.86561 0.95847 1.45556 1.59999 1.23688 1.05605 1.18593 0.79446 0.84794 0.82481 1.90815 1.47429 1.34319 1.70929 1.19544 1.04322 0.98720 0.92239 1.19677 0.97383 0.95457 0.92713 1.21504 1.00010 0.97254 0.76983 1.85932 1.71685 1.46771 1.19699 1.19143 0.94081 0.88487 0.91050 1.20329 1.04268 1.01326 0.89969 1.20266 0.97206 0.94612 0.96312 1.25313 1.01887 1.00779 0.90693 1.86468 1.27443 1.44233 1.78078 0.93544 0.89691 0.72212 0.75533 1.21161 1.01116 0.99314 0.95439 1.21229 0.97245 0.97456 0.93434 1.21517 1.03109 0.97193 1.01198 1.21096 0.97613 0.94566 1.00913 1.21777 0.96494 0.96506 0.95848 1.21594 0.98635 0.99948 0.93691 1.21630 0.94231 0.91500 1.01606 1.23198 0.92500 1.03103 0.96545 1.23105 0.84966 0.95758 0.94127 0.89773 1.86494 1.44721 1.75985 1.30593 1.23942 0.96932 1.04023 0.92085 0.75340 0.75931 0.73388 0.90712 0.90913 0.85389 0.87554 0.75432 1.21261 1.22351 0.83045 0.83197 0.85378 0.85293 0.83239 0.81836 0.81421 0.92214 0.88490 0.74987 0.84843 0.87704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.03 8.78 -173.54 -1.52 1.50 16 2 C 0.53 2.03 6.61 87.66 0.58 2.61 16 3 O -0.57 -7.77 16.21 -3.02 -0.05 -7.82 16 4 C 0.13 -0.16 1.05 3.39 0.00 -0.15 16 5 N -0.69 3.86 4.73 -426.76 -2.02 1.84 16 6 C 0.56 0.95 7.40 86.79 0.64 1.59 16 7 O -0.56 -5.56 12.45 -3.88 -0.05 -5.61 16 8 C -0.15 0.04 5.87 -20.09 -0.12 -0.08 16 9 C -0.05 -0.22 5.91 -19.61 -0.12 -0.34 16 10 C 0.12 0.96 3.38 71.24 0.24 1.20 16 11 O -0.33 -3.22 8.62 -92.51 -0.80 -4.02 16 12 C 0.12 1.13 6.69 22.51 0.15 1.28 16 13 C -0.14 -1.14 9.63 22.37 0.22 -0.92 16 14 C -0.08 -0.38 5.35 -19.88 -0.11 -0.49 16 15 C -0.08 -0.19 2.80 71.24 0.20 0.01 16 16 O -0.55 -1.67 12.84 -148.98 -1.91 -3.58 16 17 Si 0.78 -0.30 29.80 68.60 2.04 1.75 16 18 C -0.15 -0.38 8.67 22.28 0.19 -0.18 16 19 C -0.08 -0.32 10.04 22.25 0.22 -0.10 16 20 C -0.21 -1.72 9.04 22.37 0.20 -1.52 16 21 C -0.12 -0.28 9.37 22.23 0.21 -0.07 16 22 C -0.09 0.31 10.04 22.33 0.22 0.53 16 23 C -0.12 0.91 10.03 22.23 0.22 1.13 16 24 C -0.07 0.54 9.54 22.53 0.21 0.76 16 25 C -0.11 -0.56 6.14 31.12 0.19 -0.37 16 26 C 0.08 0.04 4.82 31.12 0.15 0.19 16 27 H 0.08 0.23 7.63 -2.39 -0.02 0.21 16 28 O -0.57 -0.23 13.67 -148.98 -2.04 -2.26 16 29 C -0.13 0.91 7.22 31.12 0.22 1.14 16 30 H 0.42 -4.21 8.47 -92.71 -0.79 -4.99 16 31 H 0.41 -1.64 8.93 -92.70 -0.83 -2.47 16 32 H 0.42 -5.86 6.76 -92.70 -0.63 -6.48 16 33 H 0.07 0.77 6.86 -2.38 -0.02 0.75 16 34 H 0.07 0.75 6.86 -2.39 -0.02 0.73 16 35 H 0.13 1.03 8.06 -2.91 -0.02 1.01 16 36 H 0.11 0.39 7.96 -2.39 -0.02 0.37 16 37 H 0.40 -2.01 8.70 -74.06 -0.64 -2.66 16 38 H -0.29 -1.26 7.11 99.48 0.71 -0.56 16 39 H -0.30 -1.92 7.11 99.48 0.71 -1.21 16 40 H 0.15 -0.46 4.90 -2.91 -0.01 -0.47 16 41 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 42 H 0.13 1.15 6.30 -2.91 -0.02 1.13 16 43 H 0.13 0.49 7.00 -2.91 -0.02 0.47 16 44 H 0.15 -1.13 8.06 -2.91 -0.02 -1.15 16 45 H 0.16 -2.19 8.06 -2.91 -0.02 -2.22 16 46 H 0.17 -2.71 6.42 -2.91 -0.02 -2.73 16 47 H 0.06 0.72 7.63 -2.39 -0.02 0.70 16 48 H 0.10 0.51 8.14 -2.39 -0.02 0.49 16 49 H 0.40 -3.42 9.12 -74.06 -0.68 -4.10 16 50 H 0.13 -1.46 8.14 -2.39 -0.02 -1.48 16 51 H 0.10 -1.07 8.10 -2.39 -0.02 -1.09 16 Total: 0.00 -32.76 421.07 -5.06 -37.82 By element: Atomic # 1 Polarization: -23.37 SS G_CDS: -2.46 Total: -25.83 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: 3.75 Total: 6.21 kcal Atomic # 7 Polarization: 6.89 SS G_CDS: -3.54 Total: 3.34 kcal Atomic # 8 Polarization: -18.45 SS G_CDS: -4.84 Total: -23.29 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: 2.04 Total: 1.75 kcal Total: -32.76 -5.06 -37.82 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4557126.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.676 kcal (2) G-P(sol) polarization free energy of solvation -32.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds