Wall clock time and date at job start Sat Mar 6 2021 22:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21288 * 119.99746 * 2 1 4 4 C 1.50700 * 119.99937 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.84924 * 325.54110 * 4 2 1 6 6 C 1.34775 * 119.99823 * 298.27829 * 5 4 2 7 7 O 1.21278 * 119.99999 * 355.00051 * 6 5 4 8 8 C 1.50701 * 119.99393 * 175.00121 * 6 5 4 9 9 O 1.42908 * 109.46636 * 179.97438 * 8 6 5 10 10 C 1.35894 * 116.99666 * 179.97438 * 9 8 6 11 11 C 1.38715 * 120.05495 * 180.25500 * 10 9 8 12 12 C 1.38167 * 119.94645 * 180.26103 * 11 10 9 13 13 C 1.50694 * 119.97325 * 179.74944 * 12 11 10 14 14 O 1.42900 * 109.47630 * 64.71939 * 13 12 11 15 15 Si 1.86305 * 109.47166 * 184.72021 * 13 12 11 16 16 C 1.38247 * 120.05000 * 359.46129 * 12 11 10 17 17 C 1.38285 * 120.11487 * 0.28667 * 16 12 11 18 18 C 1.38117 * 120.05798 * 359.97438 * 17 16 12 19 19 C 1.53782 * 113.61309 * 194.34490 * 4 2 1 20 20 C 1.54049 * 86.98408 * 219.98122 * 19 4 2 21 21 H 1.09007 * 113.61978 * 139.97951 * 20 19 4 22 22 O 1.42900 * 113.69054 * 270.87156 * 20 19 4 23 23 C 1.53781 * 87.08042 * 25.43261 * 20 19 4 24 24 H 0.96994 * 119.99946 * 175.07874 * 1 2 3 25 25 H 0.97005 * 119.99901 * 355.08242 * 1 2 3 26 26 H 0.96999 * 119.99876 * 118.27851 * 5 4 2 27 27 H 1.08996 * 109.47422 * 60.00303 * 8 6 5 28 28 H 1.08999 * 109.47284 * 299.99703 * 8 6 5 29 29 H 1.08000 * 120.02835 * 359.97438 * 11 10 9 30 30 H 1.09001 * 109.46788 * 304.71111 * 13 12 11 31 31 H 0.96698 * 114.00040 * 59.99592 * 14 13 12 32 32 H 1.48506 * 109.99844 * 58.67339 * 15 13 12 33 33 H 1.48493 * 110.00290 * 179.97438 * 15 13 12 34 34 H 1.08006 * 119.94269 * 180.25693 * 16 12 11 35 35 H 1.08002 * 119.97183 * 179.97438 * 17 16 12 36 36 H 1.07998 * 120.03166 * 180.02562 * 18 17 16 37 37 H 1.08996 * 113.61515 * 334.48332 * 19 4 2 38 38 H 1.08997 * 113.61430 * 105.38631 * 19 4 2 39 39 H 0.96694 * 114.00024 * 277.53199 * 22 20 19 40 40 H 1.08996 * 113.61649 * 220.02325 * 23 20 19 41 41 H 1.09003 * 113.69005 * 89.12518 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4217 -2.3540 0.7649 6 6 1.2047 -2.1924 2.0853 7 8 1.6509 -1.2215 2.6588 8 6 0.4074 -3.2184 2.8488 9 8 0.3169 -2.8269 4.2202 10 6 -0.3749 -3.6492 5.0521 11 6 -0.5070 -3.3277 6.3950 12 6 -1.2062 -4.1681 7.2398 13 6 -1.3453 -3.8222 8.7000 14 8 -2.1099 -2.6225 8.8347 15 14 -2.2104 -5.2129 9.5879 16 6 -1.7834 -5.3229 6.7455 17 6 -1.6576 -5.6431 5.4061 18 6 -0.9551 -4.8090 4.5585 19 6 3.5915 -1.1559 0.3496 20 6 3.8689 -2.2059 -0.7429 21 1 4.7523 -1.9884 -1.3435 22 8 3.8403 -3.5525 -0.2656 23 6 2.5524 -1.7565 -1.3986 24 1 -0.4850 -0.8369 -0.0721 25 1 -0.4850 0.8370 0.0720 26 1 1.1279 -3.1647 0.3208 27 1 0.9016 -4.1874 2.7798 28 1 -0.5939 -3.2900 2.4242 29 1 -0.0597 -2.4235 6.7808 30 1 -0.3565 -3.6737 9.1339 31 1 -3.0032 -2.6823 8.4693 32 1 -1.4416 -6.4734 9.4285 33 1 -2.3533 -4.8844 11.0290 34 1 -2.3332 -5.9765 7.4067 35 1 -2.1092 -6.5460 5.0225 36 1 -0.8574 -5.0593 3.5125 37 1 3.9969 -0.1703 0.1210 38 1 3.8403 -1.4940 1.3555 39 1 4.6655 -3.8408 0.1478 40 1 1.9630 -2.5793 -1.8031 41 1 2.6729 -0.9349 -2.1047 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4860298.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:44 Heat of formation + Delta-G solvation = -117.155471 kcal Electronic energy + Delta-G solvation = -27386.936920 eV Core-core repulsion = 23235.503239 eV Total energy + Delta-G solvation = -4151.433682 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.33232 -41.39468 -40.02488 -39.21474 -38.80208 -37.23037 -36.20866 -34.77529 -33.96245 -32.52379 -31.68271 -29.48883 -27.14382 -26.99965 -26.54600 -23.72836 -23.03644 -22.35453 -21.67334 -20.47186 -19.39987 -19.10684 -18.70453 -18.14308 -17.92030 -17.59042 -17.48571 -17.24313 -16.86014 -16.69844 -16.15271 -15.75003 -15.64492 -15.50307 -15.28765 -15.14056 -14.86370 -14.63150 -14.17329 -14.02240 -13.95521 -13.72924 -13.49261 -13.14864 -13.00551 -12.62436 -12.55156 -12.23958 -11.98559 -11.88446 -11.70108 -11.39610 -11.12821 -10.87704 -10.68545 -10.49091 -10.14523 -9.97955 -9.31870 -5.04384 0.15207 0.35194 1.16095 1.29364 1.35667 1.57075 1.63370 1.96692 2.40667 2.44949 2.61930 2.78665 3.18297 3.29962 3.41424 3.46800 3.54440 3.60197 3.68185 3.79887 3.81926 3.83822 3.95868 4.13791 4.18647 4.31600 4.42110 4.46459 4.49469 4.57987 4.65473 4.74528 4.91903 4.96309 5.17792 5.20932 5.29859 5.38993 5.59333 5.75897 6.11089 6.27178 6.30692 6.45815 6.56835 6.97354 7.22545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.532 3.468 3 O -0.528 6.528 4 C 0.134 3.866 5 N -0.699 5.699 6 C 0.515 3.485 7 O -0.497 6.497 8 C 0.043 3.957 9 O -0.288 6.288 10 C 0.129 3.871 11 C -0.120 4.120 12 C -0.079 4.079 13 C -0.071 4.071 14 O -0.537 6.537 15 Si 0.692 3.308 16 C -0.152 4.152 17 C -0.073 4.073 18 C -0.206 4.206 19 C -0.153 4.153 20 C 0.082 3.918 21 H 0.081 0.919 22 O -0.550 6.550 23 C -0.117 4.117 24 H 0.399 0.601 25 H 0.404 0.596 26 H 0.410 0.590 27 H 0.096 0.904 28 H 0.096 0.904 29 H 0.135 0.865 30 H 0.115 0.885 31 H 0.379 0.621 32 H -0.257 1.257 33 H -0.254 1.254 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.114 0.886 38 H 0.087 0.913 39 H 0.387 0.613 40 H 0.094 0.906 41 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.227 -7.415 -5.432 10.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.314 3.686 3 O -0.402 6.402 4 C 0.044 3.956 5 N -0.357 5.357 6 C 0.300 3.700 7 O -0.369 6.369 8 C -0.036 4.036 9 O -0.200 6.200 10 C 0.084 3.916 11 C -0.139 4.139 12 C -0.080 4.080 13 C -0.182 4.182 14 O -0.343 6.343 15 Si 0.594 3.406 16 C -0.170 4.170 17 C -0.091 4.091 18 C -0.225 4.225 19 C -0.192 4.192 20 C 0.022 3.978 21 H 0.099 0.901 22 O -0.356 6.356 23 C -0.155 4.155 24 H 0.227 0.773 25 H 0.235 0.765 26 H 0.246 0.754 27 H 0.114 0.886 28 H 0.113 0.887 29 H 0.153 0.847 30 H 0.133 0.867 31 H 0.227 0.773 32 H -0.182 1.182 33 H -0.179 1.179 34 H 0.147 0.853 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.132 0.868 38 H 0.106 0.894 39 H 0.235 0.765 40 H 0.112 0.888 41 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -3.253 -6.280 -4.256 8.254 hybrid contribution 0.377 -0.459 -0.397 0.714 sum -2.876 -6.739 -4.652 8.680 Atomic orbital electron populations 1.43779 1.07215 1.13008 1.77244 1.20372 0.82766 0.90595 0.74881 1.90773 1.68163 1.32526 1.48777 1.21425 0.93442 0.85864 0.94858 1.45373 1.60970 1.21317 1.08005 1.20102 0.80794 0.87147 0.81985 1.90845 1.48048 1.30272 1.67691 1.22416 1.01275 0.97879 0.82004 1.86177 1.69637 1.46634 1.17585 1.19038 0.92458 0.89745 0.90400 1.20284 1.02104 1.01488 0.90030 1.20162 0.97177 0.94521 0.96127 1.25141 1.00671 0.97125 0.95238 1.86532 1.29808 1.34667 1.83261 0.94708 0.89518 0.76108 0.80269 1.20931 1.02563 0.97463 0.96055 1.20910 0.96599 0.98686 0.92871 1.21291 1.04043 0.96196 1.00938 1.23977 0.92217 1.01668 1.01309 1.22711 0.97852 0.82336 0.94892 0.90090 1.86365 1.41869 1.27249 1.80155 1.23318 0.96523 1.02204 0.93484 0.77337 0.76484 0.75377 0.88572 0.88668 0.84668 0.86722 0.77337 1.18209 1.17945 0.85300 0.85029 0.85215 0.86789 0.89431 0.76492 0.88790 0.86446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.66 8.78 31.22 0.27 0.94 16 2 C 0.53 1.34 6.48 -10.98 -0.07 1.27 16 3 O -0.53 -3.67 16.76 5.55 0.09 -3.57 16 4 C 0.13 -0.03 0.95 -132.15 -0.13 -0.15 16 5 N -0.70 1.49 4.16 -47.92 -0.20 1.29 16 6 C 0.52 0.45 7.46 -10.99 -0.08 0.37 16 7 O -0.50 -3.12 15.22 -14.35 -0.22 -3.33 16 8 C 0.04 -0.06 5.22 36.01 0.19 0.12 16 9 O -0.29 -0.77 9.67 -39.31 -0.38 -1.15 16 10 C 0.13 0.21 6.69 -39.21 -0.26 -0.05 16 11 C -0.12 -0.27 9.62 -39.43 -0.38 -0.65 16 12 C -0.08 -0.05 5.35 -104.65 -0.56 -0.61 16 13 C -0.07 -0.02 2.80 36.00 0.10 0.08 16 14 O -0.54 -0.46 12.83 -35.23 -0.45 -0.91 16 15 Si 0.69 -0.73 29.80 -169.99 -5.07 -5.80 16 16 C -0.15 0.12 8.67 -39.56 -0.34 -0.22 16 17 C -0.07 0.10 10.04 -39.61 -0.40 -0.30 16 18 C -0.21 0.17 9.04 -39.43 -0.36 -0.18 16 19 C -0.15 -0.12 6.72 -25.78 -0.17 -0.29 16 20 C 0.08 -0.17 5.28 -25.78 -0.14 -0.31 16 21 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 22 O -0.55 1.30 13.10 -35.23 -0.46 0.84 16 23 C -0.12 0.30 7.18 -25.92 -0.19 0.12 16 24 H 0.40 -1.49 8.42 -40.82 -0.34 -1.84 16 25 H 0.40 -0.43 8.93 -40.82 -0.36 -0.79 16 26 H 0.41 -2.10 8.64 -40.82 -0.35 -2.45 16 27 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 28 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 29 H 0.14 0.41 8.06 -52.49 -0.42 -0.01 16 30 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 31 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 32 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 33 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 34 H 0.13 -0.37 4.90 -52.48 -0.26 -0.62 16 35 H 0.13 -0.49 8.06 -52.49 -0.42 -0.91 16 36 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 37 H 0.11 0.23 7.34 -51.93 -0.38 -0.16 16 38 H 0.09 0.22 7.56 -51.93 -0.39 -0.18 16 39 H 0.39 -2.01 9.12 45.56 0.42 -1.59 16 40 H 0.09 -0.38 8.09 -51.93 -0.42 -0.80 16 41 H 0.12 -0.33 8.09 -51.93 -0.42 -0.75 16 LS Contribution 349.66 15.07 5.27 5.27 Total: 0.00 -13.56 349.66 -8.05 -21.61 By element: Atomic # 1 Polarization: -10.26 SS G_CDS: -4.13 Total: -14.39 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: -2.78 Total: -0.79 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: 0.07 Total: 2.22 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -1.42 Total: -8.12 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.07 Total: -5.80 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -13.56 -8.05 -21.61 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4860298.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.548 kcal (2) G-P(sol) polarization free energy of solvation -13.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds