Wall clock time and date at job start Sat Mar 6 2021 22:41:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21288 * 119.99746 * 2 1 4 4 C 1.50700 * 119.99937 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.84924 * 325.54110 * 4 2 1 6 6 C 1.34775 * 119.99823 * 298.27829 * 5 4 2 7 7 O 1.21278 * 119.99999 * 355.00051 * 6 5 4 8 8 C 1.50701 * 119.99393 * 175.00121 * 6 5 4 9 9 O 1.42908 * 109.46636 * 179.97438 * 8 6 5 10 10 C 1.35894 * 116.99666 * 179.97438 * 9 8 6 11 11 C 1.38715 * 120.05495 * 180.25500 * 10 9 8 12 12 C 1.38167 * 119.94645 * 180.26103 * 11 10 9 13 13 C 1.50694 * 119.97325 * 179.74944 * 12 11 10 14 14 O 1.42900 * 109.47630 * 64.71939 * 13 12 11 15 15 Si 1.86305 * 109.47166 * 184.72021 * 13 12 11 16 16 C 1.38247 * 120.05000 * 359.46129 * 12 11 10 17 17 C 1.38285 * 120.11487 * 0.28667 * 16 12 11 18 18 C 1.38117 * 120.05798 * 359.97438 * 17 16 12 19 19 C 1.53782 * 113.61309 * 194.34490 * 4 2 1 20 20 C 1.54049 * 86.98408 * 219.98122 * 19 4 2 21 21 H 1.09007 * 113.61978 * 139.97951 * 20 19 4 22 22 O 1.42900 * 113.69054 * 270.87156 * 20 19 4 23 23 C 1.53781 * 87.08042 * 25.43261 * 20 19 4 24 24 H 0.96994 * 119.99946 * 175.07874 * 1 2 3 25 25 H 0.97005 * 119.99901 * 355.08242 * 1 2 3 26 26 H 0.96999 * 119.99876 * 118.27851 * 5 4 2 27 27 H 1.08996 * 109.47422 * 60.00303 * 8 6 5 28 28 H 1.08999 * 109.47284 * 299.99703 * 8 6 5 29 29 H 1.08000 * 120.02835 * 359.97438 * 11 10 9 30 30 H 1.09001 * 109.46788 * 304.71111 * 13 12 11 31 31 H 0.96698 * 114.00040 * 59.99592 * 14 13 12 32 32 H 1.48506 * 109.99844 * 58.67339 * 15 13 12 33 33 H 1.48493 * 110.00290 * 179.97438 * 15 13 12 34 34 H 1.08006 * 119.94269 * 180.25693 * 16 12 11 35 35 H 1.08002 * 119.97183 * 179.97438 * 17 16 12 36 36 H 1.07998 * 120.03166 * 180.02562 * 18 17 16 37 37 H 1.08996 * 113.61515 * 334.48332 * 19 4 2 38 38 H 1.08997 * 113.61430 * 105.38631 * 19 4 2 39 39 H 0.96694 * 114.00024 * 277.53199 * 22 20 19 40 40 H 1.08996 * 113.61649 * 220.02325 * 23 20 19 41 41 H 1.09003 * 113.69005 * 89.12518 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4217 -2.3540 0.7649 6 6 1.2047 -2.1924 2.0853 7 8 1.6509 -1.2215 2.6588 8 6 0.4074 -3.2184 2.8488 9 8 0.3169 -2.8269 4.2202 10 6 -0.3749 -3.6492 5.0521 11 6 -0.5070 -3.3277 6.3950 12 6 -1.2062 -4.1681 7.2398 13 6 -1.3453 -3.8222 8.7000 14 8 -2.1099 -2.6225 8.8347 15 14 -2.2104 -5.2129 9.5879 16 6 -1.7834 -5.3229 6.7455 17 6 -1.6576 -5.6431 5.4061 18 6 -0.9551 -4.8090 4.5585 19 6 3.5915 -1.1559 0.3496 20 6 3.8689 -2.2059 -0.7429 21 1 4.7523 -1.9884 -1.3435 22 8 3.8403 -3.5525 -0.2656 23 6 2.5524 -1.7565 -1.3986 24 1 -0.4850 -0.8369 -0.0721 25 1 -0.4850 0.8370 0.0720 26 1 1.1279 -3.1647 0.3208 27 1 0.9016 -4.1874 2.7798 28 1 -0.5939 -3.2900 2.4242 29 1 -0.0597 -2.4235 6.7808 30 1 -0.3565 -3.6737 9.1339 31 1 -3.0032 -2.6823 8.4693 32 1 -1.4416 -6.4734 9.4285 33 1 -2.3533 -4.8844 11.0290 34 1 -2.3332 -5.9765 7.4067 35 1 -2.1092 -6.5460 5.0225 36 1 -0.8574 -5.0593 3.5125 37 1 3.9969 -0.1703 0.1210 38 1 3.8403 -1.4940 1.3555 39 1 4.6655 -3.8408 0.1478 40 1 1.9630 -2.5793 -1.8031 41 1 2.6729 -0.9349 -2.1047 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_4860298.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:43 Heat of formation + Delta-G solvation = -129.142856 kcal Electronic energy + Delta-G solvation = -27387.456732 eV Core-core repulsion = 23235.503239 eV Total energy + Delta-G solvation = -4151.953494 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.35357 -41.37524 -40.11821 -39.28202 -38.82985 -37.23767 -36.16420 -34.83482 -34.00431 -32.47352 -31.63132 -29.42305 -27.08719 -26.97576 -26.53947 -23.67957 -23.06579 -22.32865 -21.62883 -20.48968 -19.38261 -19.10123 -18.67227 -18.11915 -17.92792 -17.59936 -17.43102 -17.18789 -16.85416 -16.66020 -16.18883 -15.84206 -15.74441 -15.53411 -15.35982 -15.13090 -14.81378 -14.64316 -14.19650 -14.04122 -13.82888 -13.58752 -13.44323 -13.22268 -12.93493 -12.64113 -12.55934 -12.15037 -12.02328 -11.74606 -11.68828 -11.52154 -11.15540 -10.90069 -10.79098 -10.50065 -10.19643 -9.93982 -9.29103 -4.99648 0.20413 0.38599 1.17446 1.29253 1.32843 1.48963 1.65517 1.97129 2.42996 2.47495 2.67083 2.96564 3.24917 3.37092 3.47272 3.52325 3.66463 3.67636 3.82358 3.92042 3.98766 4.05735 4.13109 4.24776 4.30498 4.34701 4.48466 4.58243 4.63519 4.67258 4.75861 4.83318 4.87143 4.97393 5.23455 5.24516 5.36900 5.44904 5.68773 5.71824 6.19737 6.29294 6.40201 6.74214 6.77743 7.02506 7.15362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.834 5.834 2 C 0.522 3.478 3 O -0.584 6.584 4 C 0.131 3.869 5 N -0.675 5.675 6 C 0.513 3.487 7 O -0.561 6.561 8 C 0.041 3.959 9 O -0.324 6.324 10 C 0.114 3.886 11 C -0.153 4.153 12 C -0.085 4.085 13 C -0.088 4.088 14 O -0.559 6.559 15 Si 0.798 3.202 16 C -0.155 4.155 17 C -0.069 4.069 18 C -0.200 4.200 19 C -0.166 4.166 20 C 0.095 3.905 21 H 0.096 0.904 22 O -0.554 6.554 23 C -0.104 4.104 24 H 0.415 0.585 25 H 0.406 0.594 26 H 0.429 0.571 27 H 0.126 0.874 28 H 0.133 0.867 29 H 0.107 0.893 30 H 0.098 0.902 31 H 0.396 0.604 32 H -0.280 1.280 33 H -0.303 1.303 34 H 0.152 0.848 35 H 0.165 0.835 36 H 0.164 0.836 37 H 0.092 0.908 38 H 0.063 0.937 39 H 0.399 0.601 40 H 0.120 0.880 41 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.933 -10.748 -7.414 14.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.397 5.397 2 C 0.306 3.694 3 O -0.463 6.463 4 C 0.040 3.960 5 N -0.333 5.333 6 C 0.300 3.700 7 O -0.438 6.438 8 C -0.037 4.037 9 O -0.238 6.238 10 C 0.069 3.931 11 C -0.172 4.172 12 C -0.086 4.086 13 C -0.196 4.196 14 O -0.367 6.367 15 Si 0.703 3.297 16 C -0.173 4.173 17 C -0.087 4.087 18 C -0.219 4.219 19 C -0.205 4.205 20 C 0.036 3.964 21 H 0.113 0.887 22 O -0.362 6.362 23 C -0.142 4.142 24 H 0.246 0.754 25 H 0.237 0.763 26 H 0.270 0.730 27 H 0.143 0.857 28 H 0.151 0.849 29 H 0.125 0.875 30 H 0.115 0.885 31 H 0.246 0.754 32 H -0.207 1.207 33 H -0.231 1.231 34 H 0.169 0.831 35 H 0.183 0.817 36 H 0.181 0.819 37 H 0.111 0.889 38 H 0.081 0.919 39 H 0.249 0.751 40 H 0.138 0.862 41 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -5.009 -9.674 -6.305 12.587 hybrid contribution 0.918 0.604 0.257 1.128 sum -4.091 -9.071 -6.048 11.644 Atomic orbital electron populations 1.43690 1.06410 1.14045 1.75539 1.20917 0.83580 0.90937 0.73990 1.90739 1.69392 1.34571 1.51566 1.21431 0.92400 0.85379 0.96755 1.45157 1.59675 1.21400 1.07042 1.20683 0.80054 0.86703 0.82568 1.90831 1.50770 1.33043 1.69116 1.22706 1.03097 0.97718 0.80170 1.86127 1.70227 1.47951 1.19500 1.19178 0.93173 0.90769 0.89983 1.20290 1.03931 1.01531 0.91411 1.20196 0.97453 0.95093 0.95817 1.25451 1.00471 0.97894 0.95823 1.86484 1.31161 1.35430 1.83592 0.93559 0.87189 0.72825 0.76157 1.21221 1.02140 0.96822 0.97099 1.21364 0.95588 0.99381 0.92348 1.21647 1.02779 0.94745 1.02686 1.23983 0.93567 1.01850 1.01102 1.22624 0.98833 0.81657 0.93336 0.88663 1.86322 1.43101 1.26566 1.80225 1.23325 0.96090 1.02922 0.91852 0.75421 0.76325 0.73034 0.85655 0.84910 0.87511 0.88466 0.75435 1.20677 1.23121 0.83124 0.81700 0.81904 0.88906 0.91858 0.75052 0.86157 0.86168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 0.93 8.78 -173.52 -1.52 -0.59 16 2 C 0.52 3.41 6.48 87.66 0.57 3.98 16 3 O -0.58 -9.86 16.76 -3.06 -0.05 -9.91 16 4 C 0.13 0.00 0.95 3.38 0.00 0.01 16 5 N -0.67 3.40 4.16 -423.91 -1.76 1.64 16 6 C 0.51 1.09 7.46 87.66 0.65 1.74 16 7 O -0.56 -8.53 15.22 16.01 0.24 -8.29 16 8 C 0.04 -0.17 5.22 71.24 0.37 0.20 16 9 O -0.32 -2.07 9.67 -73.32 -0.71 -2.78 16 10 C 0.11 0.42 6.69 22.51 0.15 0.57 16 11 C -0.15 -1.03 9.62 22.37 0.22 -0.81 16 12 C -0.09 -0.18 5.35 -19.88 -0.11 -0.28 16 13 C -0.09 -0.18 2.80 71.23 0.20 0.02 16 14 O -0.56 -1.93 12.83 -148.98 -1.91 -3.84 16 15 Si 0.80 -1.73 29.80 68.60 2.04 0.31 16 16 C -0.16 0.48 8.67 22.28 0.19 0.67 16 17 C -0.07 0.39 10.04 22.25 0.22 0.61 16 18 C -0.20 0.80 9.04 22.37 0.20 1.00 16 19 C -0.17 -0.58 6.72 31.21 0.21 -0.37 16 20 C 0.10 -0.45 5.28 31.21 0.16 -0.29 16 21 H 0.10 -0.69 8.14 -2.38 -0.02 -0.71 16 22 O -0.55 3.49 13.10 -148.98 -1.95 1.54 16 23 C -0.10 0.66 7.18 31.12 0.22 0.88 16 24 H 0.41 -3.46 8.42 -92.71 -0.78 -4.24 16 25 H 0.41 -0.51 8.93 -92.70 -0.83 -1.34 16 26 H 0.43 -5.54 8.64 -92.71 -0.80 -6.34 16 27 H 0.13 -1.28 7.66 -2.39 -0.02 -1.30 16 28 H 0.13 -1.61 7.66 -2.39 -0.02 -1.63 16 29 H 0.11 1.17 8.06 -2.91 -0.02 1.15 16 30 H 0.10 0.44 7.96 -2.39 -0.02 0.43 16 31 H 0.40 -2.17 8.70 -74.06 -0.64 -2.81 16 32 H -0.28 -0.45 7.11 99.48 0.71 0.25 16 33 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 34 H 0.15 -1.22 4.90 -2.91 -0.01 -1.23 16 35 H 0.17 -2.01 8.06 -2.91 -0.02 -2.03 16 36 H 0.16 -1.86 6.30 -2.91 -0.02 -1.88 16 37 H 0.09 0.69 7.34 -2.39 -0.02 0.68 16 38 H 0.06 0.51 7.56 -2.39 -0.02 0.49 16 39 H 0.40 -4.60 9.12 -74.06 -0.68 -5.27 16 40 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 41 H 0.12 -0.77 8.09 -2.39 -0.02 -0.79 16 Total: 0.00 -38.10 349.66 -4.89 -42.99 By element: Atomic # 1 Polarization: -26.46 SS G_CDS: -2.54 Total: -29.00 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 3.27 Total: 7.93 kcal Atomic # 7 Polarization: 4.33 SS G_CDS: -3.29 Total: 1.04 kcal Atomic # 8 Polarization: -18.90 SS G_CDS: -4.38 Total: -23.28 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: 2.04 Total: 0.31 kcal Total: -38.10 -4.89 -42.99 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4860298.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.151 kcal (2) G-P(sol) polarization free energy of solvation -38.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.248 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.992 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds