Wall clock time and date at job start Sat Mar 6 2021 22:41:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42890 * 1 3 3 C 1.35983 * 117.00080 * 2 1 4 4 C 1.38672 * 120.00255 * 180.02562 * 3 2 1 5 5 C 1.38159 * 120.00136 * 180.02562 * 4 3 2 6 6 C 1.50701 * 120.00154 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.47106 * 254.98301 * 6 5 4 8 8 Si 1.86301 * 109.46963 * 14.98289 * 6 5 4 9 9 C 1.38678 * 119.99755 * 0.02562 * 5 4 3 10 10 O 1.35983 * 119.99675 * 180.02562 * 9 5 4 11 11 C 1.42904 * 116.99932 * 180.02562 * 10 9 5 12 12 C 1.50695 * 109.46996 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00457 * 359.97438 * 12 11 10 14 14 N 1.34779 * 119.99658 * 180.02562 * 12 11 10 15 15 C 1.46504 * 119.99950 * 174.89843 * 14 12 11 16 16 C 1.50699 * 112.85218 * 57.29505 * 15 14 12 17 17 N 1.34769 * 120.00066 * 47.91828 * 16 15 14 18 18 O 1.21286 * 119.99720 * 227.64536 * 16 15 14 19 19 C 1.53785 * 113.68376 * 286.02432 * 15 14 12 20 20 C 1.53782 * 87.07671 * 220.00900 * 19 15 14 21 21 H 1.09008 * 113.61457 * 270.88506 * 20 19 15 22 22 O 1.42901 * 113.61171 * 139.98487 * 20 19 15 23 23 C 1.53775 * 87.08323 * 25.43678 * 20 19 15 24 24 C 1.38716 * 120.00182 * 0.26884 * 9 5 4 25 25 C 1.38116 * 119.99556 * 359.44886 * 24 9 5 26 26 H 1.09008 * 109.47175 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47474 * 299.99915 * 1 2 3 28 28 H 1.09001 * 109.47809 * 60.00380 * 1 2 3 29 29 H 1.07998 * 120.00281 * 0.04296 * 4 3 2 30 30 H 1.08999 * 109.46818 * 134.98237 * 6 5 4 31 31 H 0.96691 * 114.00282 * 300.00067 * 7 6 5 32 32 H 1.48500 * 110.00272 * 298.68006 * 8 6 5 33 33 H 1.48501 * 110.00107 * 60.00132 * 8 6 5 34 34 H 1.09000 * 109.47008 * 59.99338 * 11 10 9 35 35 H 1.09007 * 109.46658 * 299.99487 * 11 10 9 36 36 H 0.97001 * 120.00323 * 354.88174 * 14 12 11 37 37 H 0.96998 * 120.00141 * 184.70911 * 17 16 15 38 38 H 0.96996 * 120.00383 * 4.70371 * 17 16 15 39 39 H 1.08990 * 113.61614 * 334.55609 * 19 15 14 40 40 H 1.08998 * 113.61007 * 105.46198 * 19 15 14 41 41 H 0.96708 * 114.00032 * 82.50179 * 22 20 19 42 42 H 1.09001 * 113.61511 * 220.02016 * 23 20 19 43 43 H 1.08998 * 113.69497 * 89.12784 * 23 20 19 44 44 H 1.07995 * 120.00182 * 179.70928 * 24 9 5 45 45 H 1.08006 * 119.99262 * 180.25576 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4311 1.2842 -0.0005 5 6 4.0583 2.5152 0.0000 6 6 5.5632 2.5942 -0.0012 7 8 6.0217 2.9666 1.3000 8 14 6.2718 0.9326 -0.4573 9 6 3.3029 3.6782 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0803 6.0460 0.0039 12 6 3.9345 7.2875 0.0042 13 8 5.1435 7.1918 0.0030 14 7 3.3548 8.5042 0.0067 15 6 4.1809 9.7089 0.1198 16 6 5.2197 9.8104 -0.9672 17 7 4.8704 9.6123 -2.2537 18 8 6.3690 10.0752 -0.6847 19 6 4.7423 9.9426 1.5323 20 6 4.4478 11.4365 1.3168 21 1 5.2723 11.9823 0.8578 22 8 3.9249 12.0897 2.4752 23 6 3.3660 10.9983 0.3156 24 6 1.9177 3.6056 0.0083 25 6 1.2908 2.3750 0.0019 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3635 0.5138 -0.8900 29 1 4.0194 0.3785 -0.0017 30 1 5.8874 3.3393 -0.7277 31 1 5.6913 3.8233 1.6032 32 1 5.8633 -0.0858 0.5433 33 1 5.8025 0.5339 -1.8086 34 1 2.4524 6.0371 0.8948 35 1 2.4497 6.0386 -0.8852 36 1 2.3908 8.5824 -0.0666 37 1 5.5499 9.6099 -2.9459 38 1 3.9395 9.4721 -2.4875 39 1 4.1425 9.4888 2.3211 40 1 5.8045 9.7155 1.6230 41 1 4.6006 12.3678 3.1087 42 1 3.3172 11.6235 -0.5759 43 1 2.3894 10.8329 0.7705 44 1 1.3295 4.5113 0.0143 45 1 0.2122 2.3185 0.0029 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4974302.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:47 Heat of formation + Delta-G solvation = -153.927603 kcal Electronic energy + Delta-G solvation = -31981.962614 eV Core-core repulsion = 27354.714562 eV Total energy + Delta-G solvation = -4627.248052 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.40780 -41.80834 -40.54221 -39.67895 -38.98614 -38.04518 -36.88671 -36.47376 -34.79207 -34.17829 -32.85723 -31.18739 -29.68792 -28.18295 -27.15536 -26.52783 -26.36554 -23.99080 -23.11649 -22.45052 -21.68140 -20.49934 -19.66109 -19.35465 -18.89068 -18.50227 -18.35643 -17.97318 -17.80940 -17.63119 -17.42546 -16.87337 -16.77202 -16.08819 -15.96560 -15.75390 -15.61982 -15.53399 -15.30446 -15.21884 -14.84725 -14.66942 -14.19482 -13.95091 -13.86971 -13.68704 -13.66676 -13.44133 -13.34570 -13.13701 -12.78810 -12.61059 -12.32258 -12.00695 -11.92602 -11.60886 -11.38635 -11.23112 -11.10881 -10.92617 -10.88179 -10.74408 -10.36179 -10.16564 -8.90312 -4.69869 -0.01160 0.26815 1.04356 1.25005 1.49583 1.54126 1.77687 2.07817 2.18204 2.26767 2.33116 2.48062 3.01256 3.04835 3.22033 3.29134 3.46290 3.54853 3.58532 3.63438 3.71017 3.71537 3.89010 4.00680 4.01927 4.05152 4.08278 4.11022 4.24994 4.37287 4.41914 4.42569 4.47726 4.56816 4.63549 4.75752 4.94007 4.96747 5.02839 5.06700 5.10020 5.31578 5.68844 5.92755 6.08414 6.21205 6.30284 6.54476 6.73694 6.85527 7.15304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.105 3.895 4 C -0.115 4.115 5 C -0.095 4.095 6 C -0.076 4.076 7 O -0.533 6.533 8 Si 0.747 3.253 9 C 0.101 3.899 10 O -0.288 6.288 11 C 0.043 3.957 12 C 0.513 3.487 13 O -0.489 6.489 14 N -0.714 5.714 15 C 0.130 3.870 16 C 0.542 3.458 17 N -0.847 5.847 18 O -0.519 6.519 19 C -0.154 4.154 20 C 0.083 3.917 21 H 0.094 0.906 22 O -0.556 6.556 23 C -0.118 4.118 24 C -0.163 4.163 25 C -0.165 4.165 26 H 0.103 0.897 27 H 0.057 0.943 28 H 0.056 0.944 29 H 0.139 0.861 30 H 0.079 0.921 31 H 0.368 0.632 32 H -0.251 1.251 33 H -0.249 1.249 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.408 0.592 37 H 0.407 0.593 38 H 0.400 0.600 39 H 0.102 0.898 40 H 0.094 0.906 41 H 0.386 0.614 42 H 0.089 0.911 43 H 0.112 0.888 44 H 0.135 0.865 45 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.802 2.513 -2.334 8.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.060 3.940 4 C -0.133 4.133 5 C -0.096 4.096 6 C -0.184 4.184 7 O -0.338 6.338 8 Si 0.645 3.355 9 C 0.056 3.944 10 O -0.201 6.201 11 C -0.036 4.036 12 C 0.298 3.702 13 O -0.360 6.360 14 N -0.371 5.371 15 C 0.040 3.960 16 C 0.324 3.676 17 N -0.411 5.411 18 O -0.393 6.393 19 C -0.193 4.193 20 C 0.023 3.977 21 H 0.112 0.888 22 O -0.362 6.362 23 C -0.156 4.156 24 C -0.182 4.182 25 C -0.183 4.183 26 H 0.122 0.878 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.157 0.843 30 H 0.097 0.903 31 H 0.216 0.784 32 H -0.176 1.176 33 H -0.173 1.173 34 H 0.114 0.886 35 H 0.112 0.888 36 H 0.244 0.756 37 H 0.238 0.762 38 H 0.227 0.773 39 H 0.120 0.880 40 H 0.113 0.887 41 H 0.234 0.766 42 H 0.107 0.893 43 H 0.130 0.870 44 H 0.153 0.847 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.329 0.948 -2.507 6.873 hybrid contribution -2.334 1.293 -0.061 2.669 sum -8.663 2.241 -2.568 9.310 Atomic orbital electron populations 1.23113 0.77923 1.04465 1.01383 1.86116 1.21698 1.26256 1.88855 1.18804 0.91825 0.84666 0.98754 1.20138 0.91925 0.97142 1.04131 1.19502 0.96749 0.89861 1.03517 1.25215 0.90517 1.13662 0.89050 1.86699 1.73565 1.41928 1.31599 0.93061 0.91304 0.72041 0.79049 1.18605 0.90747 0.84506 1.00522 1.86120 1.33708 1.10952 1.89277 1.22419 0.93045 0.83987 1.04174 1.20145 0.89087 0.84046 0.76963 1.90867 1.13819 1.86084 1.45275 1.45709 1.10498 1.03967 1.76965 1.21557 0.92537 0.85741 0.96121 1.19770 0.88513 0.75836 0.83473 1.43683 1.13107 1.75901 1.08409 1.90783 1.19473 1.46616 1.82392 1.23973 1.04188 0.97061 0.94047 1.23088 0.95826 0.91522 0.87233 0.88820 1.86466 1.38012 1.79024 1.32689 1.23369 0.99516 0.92826 0.99922 1.21030 0.92801 0.98682 1.05708 1.21086 1.00363 0.91443 1.05450 0.87828 0.92479 0.92506 0.84348 0.90261 0.78416 1.17551 1.17320 0.88554 0.88783 0.75595 0.76190 0.77261 0.87997 0.88745 0.76558 0.89265 0.86990 0.84733 0.84560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.82 10.50 -19.69 -0.21 -1.02 16 3 C 0.10 0.29 6.68 -39.24 -0.26 0.02 16 4 C -0.12 -0.43 8.59 -39.45 -0.34 -0.76 16 5 C -0.10 -0.31 5.28 -104.49 -0.55 -0.86 16 6 C -0.08 -0.23 2.33 36.01 0.08 -0.14 16 7 O -0.53 -2.12 12.65 -35.23 -0.45 -2.57 16 8 Si 0.75 1.26 30.40 -169.99 -5.17 -3.91 16 9 C 0.10 0.18 6.62 -39.24 -0.26 -0.08 16 10 O -0.29 -0.44 8.56 -39.60 -0.34 -0.78 16 11 C 0.04 -0.10 5.22 36.00 0.19 0.09 16 12 C 0.51 -0.11 7.63 -10.99 -0.08 -0.20 16 13 O -0.49 -2.45 15.44 -14.35 -0.22 -2.68 16 14 N -0.71 2.37 5.23 -47.92 -0.25 2.12 16 15 C 0.13 -0.13 1.02 -132.15 -0.13 -0.27 16 16 C 0.54 0.94 5.65 -10.99 -0.06 0.88 16 17 N -0.85 1.39 8.83 31.22 0.28 1.66 16 18 O -0.52 -3.24 16.54 5.55 0.09 -3.15 16 19 C -0.15 -0.05 6.94 -25.92 -0.18 -0.23 16 20 C 0.08 -0.05 4.86 -25.92 -0.13 -0.18 16 21 H 0.09 -0.01 8.02 -51.92 -0.42 -0.43 16 22 O -0.56 0.23 13.67 -35.23 -0.48 -0.25 16 23 C -0.12 0.33 7.19 -25.92 -0.19 0.14 16 24 C -0.16 0.04 9.03 -39.45 -0.36 -0.32 16 25 C -0.16 -0.07 9.03 -39.45 -0.36 -0.42 16 26 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 27 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.14 0.53 4.93 -52.49 -0.26 0.27 16 30 H 0.08 0.22 7.82 -51.93 -0.41 -0.18 16 31 H 0.37 0.97 8.60 45.56 0.39 1.37 16 32 H -0.25 -0.98 6.81 56.52 0.38 -0.59 16 33 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 34 H 0.10 -0.45 7.65 -51.93 -0.40 -0.85 16 35 H 0.09 -0.48 7.67 -51.93 -0.40 -0.88 16 36 H 0.41 -2.89 8.67 -40.82 -0.35 -3.24 16 37 H 0.41 -0.74 8.93 -40.82 -0.36 -1.10 16 38 H 0.40 -1.88 8.81 -40.82 -0.36 -2.24 16 39 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 40 H 0.09 0.28 7.45 -51.93 -0.39 -0.10 16 41 H 0.39 -1.49 9.12 45.56 0.42 -1.07 16 42 H 0.09 -0.33 8.09 -51.93 -0.42 -0.75 16 43 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 44 H 0.13 -0.48 6.29 -52.49 -0.33 -0.81 16 45 H 0.14 -0.29 6.29 -52.48 -0.33 -0.62 16 LS Contribution 379.70 15.07 5.72 5.72 Total: 0.00 -13.37 379.70 -7.55 -20.92 By element: Atomic # 1 Polarization: -9.79 SS G_CDS: -4.89 Total: -14.68 kcal Atomic # 6 Polarization: 0.24 SS G_CDS: -1.63 Total: -1.39 kcal Atomic # 7 Polarization: 3.75 SS G_CDS: 0.03 Total: 3.78 kcal Atomic # 8 Polarization: -8.84 SS G_CDS: -1.60 Total: -10.44 kcal Atomic # 14 Polarization: 1.26 SS G_CDS: -5.17 Total: -3.91 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -13.37 -7.55 -20.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4974302.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.010 kcal (2) G-P(sol) polarization free energy of solvation -13.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds