Wall clock time and date at job start Sat Mar 6 2021 22:41:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35893 * 117.00347 * 2 1 4 4 C 1.38612 * 120.02859 * 180.02562 * 3 2 1 5 5 C 1.38660 * 119.89160 * 179.70388 * 4 3 2 6 6 O 1.35887 * 120.03203 * 180.27570 * 5 4 3 7 7 C 1.42906 * 116.99831 * 0.24806 * 6 5 4 8 8 C 1.50703 * 109.46909 * 179.97438 * 7 6 5 9 9 O 1.21276 * 120.00382 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99488 * 180.02562 * 8 7 6 11 11 C 1.46509 * 119.99816 * 174.99893 * 10 8 7 12 12 C 1.50699 * 112.84501 * 293.72983 * 11 10 8 13 13 N 1.34784 * 120.00376 * 323.89490 * 12 11 10 14 14 O 1.21283 * 120.00221 * 143.90133 * 12 11 10 15 15 C 1.53771 * 113.61456 * 162.42417 * 11 10 8 16 16 C 1.53783 * 87.08173 * 220.01470 * 15 11 10 17 17 H 1.08997 * 113.61710 * 270.88547 * 16 15 11 18 18 O 1.42897 * 113.69201 * 139.98811 * 16 15 11 19 19 C 1.53781 * 113.61513 * 64.92143 * 11 10 8 20 20 C 1.38760 * 119.94009 * 0.52883 * 5 4 3 21 21 C 1.50702 * 119.96969 * 179.75039 * 20 5 4 22 22 O 1.42900 * 109.46817 * 284.72561 * 21 20 5 23 23 Si 1.86297 * 109.47010 * 164.72673 * 21 20 5 24 24 C 1.38199 * 120.05360 * 359.47089 * 20 5 4 25 25 C 1.38152 * 120.11054 * 0.27649 * 24 20 5 26 26 H 1.08997 * 109.47476 * 300.00421 * 1 2 3 27 27 H 1.09003 * 109.46873 * 60.00294 * 1 2 3 28 28 H 1.08998 * 109.47666 * 179.97438 * 1 2 3 29 29 H 1.08000 * 120.05475 * 0.02562 * 4 3 2 30 30 H 1.08995 * 109.47287 * 300.00590 * 7 6 5 31 31 H 1.08998 * 109.46498 * 60.01010 * 7 6 5 32 32 H 0.96994 * 120.00757 * 354.99222 * 10 8 7 33 33 H 0.97007 * 119.99215 * 354.98888 * 13 12 11 34 34 H 0.96994 * 120.00556 * 174.98557 * 13 12 11 35 35 H 1.08998 * 113.61467 * 334.56284 * 15 11 10 36 36 H 1.08999 * 113.61723 * 105.46905 * 15 11 10 37 37 H 0.96704 * 114.00191 * 82.46769 * 18 16 15 38 38 H 1.09004 * 113.61401 * 254.53189 * 19 11 10 39 39 H 1.08997 * 113.61592 * 25.43562 * 19 11 10 40 40 H 1.08995 * 109.47176 * 44.72157 * 21 20 5 41 41 H 0.96699 * 114.00466 * 180.02562 * 22 21 20 42 42 H 1.48501 * 109.99960 * 298.67802 * 23 21 20 43 43 H 1.48502 * 110.00227 * 59.99539 * 23 21 20 44 44 H 1.07999 * 119.93922 * 180.29815 * 24 20 5 45 45 H 1.08003 * 119.96737 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4301 1.2839 -0.0005 5 6 4.0568 2.5208 -0.0067 6 8 5.4135 2.5959 -0.0130 7 6 6.1316 1.3603 -0.0182 8 6 7.6124 1.6399 -0.0253 9 8 8.0135 2.7845 -0.0253 10 7 8.4911 0.6180 -0.0316 11 6 9.9265 0.8868 -0.1491 12 6 10.3046 1.4727 -1.4851 13 7 9.6689 1.0681 -2.6026 14 8 11.1810 2.3081 -1.5548 15 6 10.8117 -0.2950 0.2802 16 6 11.7396 0.7405 0.9372 17 1 12.5099 1.1234 0.2679 18 8 12.2596 0.3250 2.2017 19 6 10.5091 1.6563 1.0481 20 6 3.2971 3.6820 -0.0013 21 6 3.9775 5.0267 -0.0024 22 8 4.5043 5.2950 1.2986 23 14 2.7438 6.3465 -0.4571 24 6 1.9172 3.6064 -0.0008 25 6 1.2906 2.3752 0.0001 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 4.0196 0.3790 -0.0014 30 1 5.8740 0.7866 0.8720 31 1 5.8658 0.7895 -0.9079 32 1 8.1732 -0.2955 0.0417 33 1 9.0197 0.3487 -2.5578 34 1 9.8605 1.4963 -3.4516 35 1 10.3305 -0.9646 0.9931 36 1 11.2699 -0.8236 -0.5557 37 1 13.0336 -0.2513 2.1385 38 1 10.7231 2.7031 0.8320 39 1 9.9453 1.5202 1.9709 40 1 4.7896 5.0224 -0.7293 41 1 4.9568 6.1464 1.3719 42 1 2.2122 6.0966 -1.8210 43 1 1.6314 6.3626 0.5265 44 1 1.3278 4.5114 -0.0014 45 1 0.2121 2.3187 0.0010 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_4974312.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:50 Heat of formation + Delta-G solvation = -148.651854 kcal Electronic energy + Delta-G solvation = -32015.987213 eV Core-core repulsion = 27388.967935 eV Total energy + Delta-G solvation = -4627.019278 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.36598 -41.74885 -40.48959 -39.64493 -38.93963 -38.11275 -36.92289 -36.40790 -34.87709 -34.04247 -32.40893 -31.48905 -29.65208 -28.55814 -27.12134 -26.34033 -26.01460 -23.90486 -22.97227 -22.37765 -21.68279 -20.46979 -19.97364 -19.25574 -18.63841 -18.34822 -18.23838 -17.83151 -17.65549 -17.48266 -17.31190 -16.80842 -16.78610 -16.70638 -15.99441 -15.92253 -15.61367 -15.52182 -15.19114 -15.10576 -14.76101 -14.55494 -13.99747 -13.89972 -13.80704 -13.71257 -13.58691 -13.43555 -13.21535 -13.19761 -12.67054 -12.51193 -12.44721 -11.94780 -11.79810 -11.78718 -11.68296 -11.45785 -11.07348 -10.90746 -10.76582 -10.31556 -10.08797 -9.74577 -9.11818 -4.90731 0.16073 0.28746 1.11959 1.33928 1.37759 1.48762 1.69076 2.00282 2.09218 2.27741 2.39211 2.52466 3.04059 3.15709 3.31938 3.43503 3.54569 3.56606 3.61670 3.70857 3.75954 3.82704 3.92388 3.96253 4.07329 4.10962 4.11034 4.25747 4.30424 4.32364 4.36171 4.48382 4.52218 4.63224 4.72679 4.84021 4.98309 5.07829 5.16189 5.17230 5.25801 5.38781 5.66613 5.99451 6.13062 6.20011 6.28854 6.61801 6.85030 6.93572 7.12594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.314 6.314 3 C 0.174 3.826 4 C -0.245 4.245 5 C 0.193 3.807 6 O -0.271 6.271 7 C 0.038 3.962 8 C 0.515 3.485 9 O -0.488 6.488 10 N -0.716 5.716 11 C 0.129 3.871 12 C 0.538 3.462 13 N -0.847 5.847 14 O -0.522 6.522 15 C -0.156 4.156 16 C 0.082 3.918 17 H 0.097 0.903 18 O -0.553 6.553 19 C -0.104 4.104 20 C -0.137 4.137 21 C -0.056 4.056 22 O -0.542 6.542 23 Si 0.680 3.320 24 C -0.043 4.043 25 C -0.238 4.238 26 H 0.059 0.941 27 H 0.059 0.941 28 H 0.104 0.896 29 H 0.140 0.860 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.408 0.592 33 H 0.400 0.600 34 H 0.406 0.594 35 H 0.111 0.889 36 H 0.084 0.916 37 H 0.382 0.618 38 H 0.096 0.904 39 H 0.102 0.898 40 H 0.073 0.927 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.251 1.251 44 H 0.132 0.868 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.547 -5.928 -2.460 6.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.226 6.226 3 C 0.128 3.872 4 C -0.265 4.265 5 C 0.146 3.854 6 O -0.182 6.182 7 C -0.041 4.041 8 C 0.299 3.701 9 O -0.359 6.359 10 N -0.374 5.374 11 C 0.039 3.961 12 C 0.320 3.680 13 N -0.411 5.411 14 O -0.395 6.395 15 C -0.194 4.194 16 C 0.022 3.978 17 H 0.115 0.885 18 O -0.358 6.358 19 C -0.143 4.143 20 C -0.138 4.138 21 C -0.167 4.167 22 O -0.348 6.348 23 Si 0.582 3.418 24 C -0.061 4.061 25 C -0.257 4.257 26 H 0.078 0.922 27 H 0.077 0.923 28 H 0.122 0.878 29 H 0.158 0.842 30 H 0.116 0.884 31 H 0.115 0.885 32 H 0.244 0.756 33 H 0.228 0.772 34 H 0.238 0.762 35 H 0.130 0.870 36 H 0.103 0.897 37 H 0.229 0.771 38 H 0.114 0.886 39 H 0.121 0.879 40 H 0.091 0.909 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.176 1.176 44 H 0.149 0.851 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -3.044 -4.582 -2.231 5.936 hybrid contribution -0.335 -1.836 -0.636 1.972 sum -3.378 -6.418 -2.867 7.799 Atomic orbital electron populations 1.23153 0.77571 1.04472 1.01787 1.86066 1.22043 1.26511 1.88006 1.18649 0.91465 0.84326 0.92725 1.20368 0.92896 0.97223 1.15985 1.18335 0.81917 0.92348 0.92756 1.86241 1.14707 1.29436 1.87822 1.22498 0.89900 0.87302 1.04416 1.20110 0.87336 0.85686 0.76927 1.90843 1.79450 1.20570 1.45081 1.45720 1.04860 1.09850 1.77008 1.21539 0.80493 1.00087 0.93938 1.19947 0.81364 0.81338 0.85336 1.43712 1.45751 1.40900 1.10716 1.90793 1.30732 1.31630 1.86384 1.24016 0.97287 0.96273 1.01863 1.23210 0.94648 0.94162 0.85786 0.88548 1.86544 1.50251 1.70480 1.28573 1.23233 0.94319 1.00632 0.96118 1.18559 0.92133 0.92425 1.10672 1.24431 1.04194 0.98956 0.89132 1.86501 1.77016 1.42576 1.28707 0.95174 0.79714 0.87224 0.79683 1.20621 0.92742 0.97549 0.95144 1.21091 1.00497 0.91671 1.12392 0.92224 0.92279 0.87755 0.84186 0.88376 0.88525 0.75638 0.77181 0.76213 0.87049 0.89727 0.77055 0.88552 0.87941 0.90855 0.77310 1.17962 1.17583 0.85110 0.84709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.44 10.49 -19.40 -0.20 -0.65 16 3 C 0.17 0.39 6.68 -39.24 -0.26 0.12 16 4 C -0.25 -0.44 8.97 -39.29 -0.35 -0.80 16 5 C 0.19 0.64 6.66 -39.23 -0.26 0.38 16 6 O -0.27 -0.91 8.99 -39.29 -0.35 -1.26 16 7 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 8 C 0.52 0.42 7.56 -10.98 -0.08 0.33 16 9 O -0.49 -2.89 15.54 -14.35 -0.22 -3.11 16 10 N -0.72 1.82 4.79 -47.92 -0.23 1.59 16 11 C 0.13 -0.04 1.05 -132.16 -0.14 -0.18 16 12 C 0.54 0.99 6.60 -10.98 -0.07 0.92 16 13 N -0.85 1.42 8.78 31.22 0.27 1.70 16 14 O -0.52 -3.18 16.21 5.55 0.09 -3.09 16 15 C -0.16 0.39 7.21 -25.92 -0.19 0.20 16 16 C 0.08 0.02 4.82 -25.92 -0.12 -0.10 16 17 H 0.10 0.08 7.63 -51.93 -0.40 -0.31 16 18 O -0.55 -0.29 13.67 -35.23 -0.48 -0.77 16 19 C -0.10 -0.22 6.16 -25.92 -0.16 -0.38 16 20 C -0.14 -0.53 5.31 -104.44 -0.55 -1.08 16 21 C -0.06 -0.14 2.37 36.01 0.09 -0.06 16 22 O -0.54 -1.72 12.86 -35.23 -0.45 -2.18 16 23 Si 0.68 0.23 30.19 -169.99 -5.13 -4.90 16 24 C -0.04 -0.13 8.65 -39.63 -0.34 -0.47 16 25 C -0.24 -0.46 9.03 -39.41 -0.36 -0.81 16 26 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 27 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 28 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.14 -0.12 6.30 -52.49 -0.33 -0.45 16 30 H 0.10 -0.30 7.65 -51.93 -0.40 -0.70 16 31 H 0.10 -0.38 7.67 -51.93 -0.40 -0.78 16 32 H 0.41 -2.59 8.71 -40.82 -0.36 -2.94 16 33 H 0.40 -1.85 8.47 -40.82 -0.35 -2.20 16 34 H 0.41 -0.83 8.93 -40.82 -0.36 -1.20 16 35 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 36 H 0.08 -0.31 8.10 -51.93 -0.42 -0.73 16 37 H 0.38 -1.45 9.12 45.56 0.42 -1.03 16 38 H 0.10 0.46 7.63 -51.93 -0.40 0.07 16 39 H 0.10 0.24 8.14 -51.93 -0.42 -0.19 16 40 H 0.07 0.18 7.82 -51.93 -0.41 -0.22 16 41 H 0.38 -0.56 8.74 45.56 0.40 -0.16 16 42 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 43 H -0.25 -0.64 6.75 56.52 0.38 -0.26 16 44 H 0.13 0.27 4.89 -52.49 -0.26 0.02 16 45 H 0.14 -0.05 6.29 -52.48 -0.33 -0.38 16 LS Contribution 379.17 15.07 5.71 5.71 Total: 0.00 -14.70 379.17 -7.49 -22.20 By element: Atomic # 1 Polarization: -9.55 SS G_CDS: -4.86 Total: -14.42 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -1.63 Total: -0.82 kcal Atomic # 7 Polarization: 3.24 SS G_CDS: 0.04 Total: 3.29 kcal Atomic # 8 Polarization: -9.44 SS G_CDS: -1.62 Total: -11.06 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.13 Total: -4.90 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -14.70 -7.49 -22.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_4974312.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.454 kcal (2) G-P(sol) polarization free energy of solvation -14.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.198 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds