Wall clock time and date at job start Sat Mar 6 2021 22:41:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35987 * 117.00035 * 2 1 4 4 C 1.39152 * 120.07409 * 179.97438 * 3 2 1 5 5 O 1.35993 * 120.07106 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99602 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.46835 * 179.97438 * 6 5 4 8 8 O 1.21283 * 120.00085 * 359.97438 * 7 6 5 9 9 N 1.34780 * 120.00209 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00351 * 174.98212 * 9 7 6 11 11 C 1.50704 * 112.85242 * 298.04086 * 10 9 7 12 12 N 1.34780 * 119.99529 * 313.52377 * 11 10 9 13 13 O 1.21280 * 119.99912 * 133.79705 * 11 10 9 14 14 C 1.53781 * 113.61324 * 166.83984 * 10 9 7 15 15 C 1.53776 * 87.08306 * 270.80048 * 14 10 9 16 16 H 1.09000 * 113.62156 * 220.02134 * 15 14 10 17 17 O 1.42901 * 113.61418 * 89.11780 * 15 14 10 18 18 C 1.53784 * 113.68968 * 69.30441 * 10 9 7 19 19 C 1.38562 * 119.85324 * 180.25003 * 4 3 2 20 20 C 1.38246 * 120.00043 * 359.47674 * 19 4 3 21 21 C 1.38247 * 120.14396 * 0.50643 * 20 19 4 22 22 C 1.50702 * 119.92662 * 179.74331 * 21 20 19 23 23 O 1.42897 * 109.47564 * 245.02053 * 22 21 20 24 24 Si 1.86295 * 109.47213 * 5.02439 * 22 21 20 25 25 C 1.38238 * 120.15007 * 359.76425 * 21 20 19 26 26 H 1.09005 * 109.46959 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47067 * 299.99816 * 1 2 3 28 28 H 1.09001 * 109.47178 * 60.00346 * 1 2 3 29 29 H 1.09003 * 109.47465 * 60.00136 * 6 5 4 30 30 H 1.08999 * 109.47350 * 299.99396 * 6 5 4 31 31 H 0.97003 * 119.99734 * 354.98635 * 9 7 6 32 32 H 0.97000 * 119.99719 * 175.43323 * 12 11 10 33 33 H 0.97002 * 119.99962 * 355.42365 * 12 11 10 34 34 H 1.08994 * 113.61474 * 25.35783 * 14 10 9 35 35 H 1.09009 * 113.61094 * 156.17366 * 14 10 9 36 36 H 0.96701 * 114.00169 * 180.02562 * 17 15 14 37 37 H 1.08996 * 113.61779 * 203.67728 * 18 10 9 38 38 H 1.09004 * 113.61576 * 334.58313 * 18 10 9 39 39 H 1.08000 * 119.99938 * 179.72280 * 19 4 3 40 40 H 1.07997 * 119.92588 * 180.24877 * 20 19 4 41 41 H 1.09008 * 109.47034 * 125.02056 * 22 21 20 42 42 H 0.96702 * 113.99712 * 60.00036 * 23 22 21 43 43 H 1.48492 * 110.00532 * 179.97438 * 24 22 21 44 44 H 1.48507 * 109.99632 * 301.31822 * 24 22 21 45 45 H 1.08004 * 120.00691 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 0.0005 5 8 4.1795 0.1476 0.0016 6 6 5.6003 0.3007 0.0015 7 6 6.2519 -1.0582 0.0034 8 8 5.5670 -2.0592 0.0051 9 7 7.5957 -1.1613 0.0032 10 6 8.2295 -2.4772 0.1159 11 6 7.9028 -3.1751 1.4110 12 7 7.9820 -2.5037 2.5770 13 8 7.5733 -4.3423 1.4045 14 6 9.7307 -2.4684 -0.2175 15 6 9.3277 -2.7310 -1.6781 16 1 9.9779 -3.4406 -2.1897 17 8 9.1027 -1.5387 -2.4329 18 6 8.0390 -3.3633 -1.1264 19 6 4.0603 2.5233 0.0058 20 6 3.3029 3.6798 -0.0005 21 6 1.9224 3.6057 -0.0014 22 6 1.1016 4.8696 -0.0024 23 8 0.3642 4.9597 1.2183 24 14 2.2309 6.3433 -0.1559 25 6 1.2932 2.3748 -0.0010 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 5.9065 0.8513 0.8910 30 1 5.9066 0.8496 -0.8890 31 1 8.1432 -0.3640 -0.0717 32 1 7.7085 -2.9323 3.4030 33 1 8.3128 -1.5919 2.5900 34 1 10.2067 -1.5001 -0.0630 35 1 10.2840 -3.2896 0.2385 36 1 8.8485 -1.6973 -3.3524 37 1 8.1295 -4.4297 -0.9202 38 1 7.1492 -3.1173 -1.7060 39 1 5.1386 2.5839 0.0107 40 1 3.7908 4.6433 -0.0004 41 1 0.4097 4.8528 -0.8445 42 1 0.9172 4.9792 2.0113 43 1 1.4337 7.5960 -0.1587 44 1 3.2000 6.3599 0.9693 45 1 0.2146 2.3196 -0.0013 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_60476.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:56 Heat of formation + Delta-G solvation = -147.645061 kcal Electronic energy + Delta-G solvation = -31935.965535 eV Core-core repulsion = 27308.989914 eV Total energy + Delta-G solvation = -4626.975621 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.28519 -41.70161 -40.20885 -39.25109 -39.02012 -38.82374 -37.01336 -36.16370 -34.68642 -33.98026 -32.04465 -31.47034 -29.69050 -28.44090 -27.09994 -26.78507 -26.15919 -23.70080 -22.67622 -22.40003 -21.79692 -20.45200 -19.78684 -19.09448 -18.71972 -18.40300 -18.09300 -17.87295 -17.86025 -17.51206 -17.08036 -16.77057 -16.59194 -16.16102 -15.97608 -15.81004 -15.67556 -15.57077 -15.47702 -15.17076 -14.91803 -14.61952 -14.29590 -13.93579 -13.76647 -13.72114 -13.53026 -13.45460 -13.11878 -12.67379 -12.56760 -12.52767 -12.20750 -12.14039 -12.01359 -11.84918 -11.65002 -11.32900 -11.07868 -10.80593 -10.66492 -10.63882 -10.09239 -9.80162 -8.87303 -4.99938 0.15962 0.28464 1.20344 1.24211 1.44128 1.54893 1.65182 1.92287 2.31161 2.44474 2.46661 2.54943 2.81302 3.18741 3.32730 3.34693 3.46143 3.58208 3.60984 3.73025 3.76445 3.85106 3.88393 3.92630 4.11230 4.21537 4.25076 4.28792 4.32813 4.43096 4.47038 4.51745 4.55415 4.65182 4.68914 4.79086 4.98698 5.01450 5.08660 5.26848 5.35578 5.53892 5.77765 5.94097 6.21423 6.32993 6.36514 6.49012 6.53467 7.06044 7.25653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.276 6.276 6 C 0.041 3.959 7 C 0.515 3.485 8 O -0.493 6.493 9 N -0.698 5.698 10 C 0.136 3.864 11 C 0.529 3.471 12 N -0.851 5.851 13 O -0.524 6.524 14 C -0.120 4.120 15 C 0.081 3.919 16 H 0.081 0.919 17 O -0.550 6.550 18 C -0.152 4.152 19 C -0.169 4.169 20 C -0.115 4.115 21 C -0.113 4.113 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.688 3.312 25 C -0.146 4.146 26 H 0.103 0.897 27 H 0.056 0.944 28 H 0.057 0.943 29 H 0.094 0.906 30 H 0.097 0.903 31 H 0.409 0.591 32 H 0.403 0.597 33 H 0.399 0.601 34 H 0.094 0.906 35 H 0.116 0.884 36 H 0.387 0.613 37 H 0.112 0.888 38 H 0.088 0.912 39 H 0.139 0.861 40 H 0.133 0.867 41 H 0.118 0.882 42 H 0.376 0.624 43 H -0.257 1.257 44 H -0.260 1.260 45 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.008 5.660 -1.954 8.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.038 4.038 7 C 0.299 3.701 8 O -0.365 6.365 9 N -0.356 5.356 10 C 0.046 3.954 11 C 0.311 3.689 12 N -0.414 5.414 13 O -0.397 6.397 14 C -0.158 4.158 15 C 0.022 3.978 16 H 0.098 0.902 17 O -0.356 6.356 18 C -0.191 4.191 19 C -0.188 4.188 20 C -0.133 4.133 21 C -0.113 4.113 22 C -0.183 4.183 23 O -0.336 6.336 24 Si 0.590 3.410 25 C -0.165 4.165 26 H 0.121 0.879 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.112 0.888 30 H 0.115 0.885 31 H 0.246 0.754 32 H 0.235 0.765 33 H 0.227 0.773 34 H 0.112 0.888 35 H 0.134 0.866 36 H 0.235 0.765 37 H 0.130 0.870 38 H 0.106 0.894 39 H 0.157 0.843 40 H 0.150 0.850 41 H 0.136 0.864 42 H 0.224 0.776 43 H -0.183 1.183 44 H -0.185 1.185 45 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.212 4.759 -1.608 7.239 hybrid contribution -0.223 0.417 1.026 1.130 sum 4.990 5.176 -0.582 7.213 Atomic orbital electron populations 1.23136 0.78088 1.04437 1.01364 1.86255 1.21362 1.25333 1.88508 1.18288 0.89025 0.85577 1.00973 1.18281 0.88298 0.85745 1.01799 1.86282 1.15963 1.27775 1.88857 1.22428 0.81336 0.95906 1.04080 1.20092 0.82181 0.90797 0.77009 1.90863 1.62378 1.37759 1.45459 1.45323 1.05831 1.08024 1.76378 1.21395 0.95478 0.84987 0.93581 1.20418 0.76262 0.86909 0.85334 1.43801 1.69191 1.18719 1.09724 1.90772 1.45689 1.16364 1.86906 1.23336 0.92355 1.04972 0.95140 1.22654 0.96015 0.87163 0.91969 0.90155 1.86367 1.91468 1.30283 1.27473 1.23909 0.99813 1.00709 0.94702 1.20986 1.00444 0.90660 1.06728 1.20733 0.92890 0.98029 1.01613 1.19970 0.93692 0.95084 1.02590 1.25013 1.01681 1.01722 0.89866 1.86603 1.36164 1.95480 1.15373 0.94930 0.79621 0.76421 0.90075 1.20948 1.00378 0.90409 1.04757 0.87862 0.92523 0.92485 0.88841 0.88511 0.75435 0.76544 0.77276 0.88775 0.86605 0.76487 0.86959 0.89360 0.84307 0.84990 0.86424 0.77625 1.18255 1.18467 0.84202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.36 10.28 -34.21 -0.35 -1.71 16 3 C 0.11 0.35 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.26 6.70 -39.12 -0.26 0.00 16 5 O -0.28 -1.05 9.45 -47.34 -0.45 -1.49 16 6 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 7 C 0.51 0.82 7.46 -10.98 -0.08 0.74 16 8 O -0.49 -3.57 15.22 -14.36 -0.22 -3.79 16 9 N -0.70 1.24 4.56 -47.92 -0.22 1.02 16 10 C 0.14 -0.01 0.88 -132.16 -0.12 -0.13 16 11 C 0.53 1.41 6.47 -10.98 -0.07 1.34 16 12 N -0.85 0.79 8.82 31.22 0.28 1.07 16 13 O -0.52 -3.88 16.72 5.56 0.09 -3.79 16 14 C -0.12 0.33 7.18 -25.92 -0.19 0.15 16 15 C 0.08 -0.17 5.28 -25.92 -0.14 -0.31 16 16 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 17 O -0.55 1.32 13.09 -35.23 -0.46 0.86 16 18 C -0.15 -0.14 6.63 -25.91 -0.17 -0.31 16 19 C -0.17 0.09 9.04 -39.46 -0.36 -0.27 16 20 C -0.11 0.09 8.66 -39.58 -0.34 -0.25 16 21 C -0.11 -0.02 5.35 -104.62 -0.56 -0.58 16 22 C -0.07 0.04 2.80 36.01 0.10 0.14 16 23 O -0.53 -0.51 12.83 -35.23 -0.45 -0.96 16 24 Si 0.69 -1.06 29.88 -169.99 -5.08 -6.14 16 25 C -0.15 -0.21 8.67 -39.46 -0.34 -0.55 16 26 H 0.10 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.44 16 29 H 0.09 -0.37 7.65 -51.93 -0.40 -0.76 16 30 H 0.10 -0.35 7.68 -51.93 -0.40 -0.75 16 31 H 0.41 -2.02 8.64 -40.82 -0.35 -2.38 16 32 H 0.40 -0.46 8.93 -40.82 -0.36 -0.83 16 33 H 0.40 -1.64 8.76 -40.82 -0.36 -1.99 16 34 H 0.09 -0.41 8.09 -51.93 -0.42 -0.83 16 35 H 0.12 -0.38 8.09 -51.92 -0.42 -0.80 16 36 H 0.39 -2.02 9.12 45.56 0.42 -1.60 16 37 H 0.11 0.23 7.40 -51.93 -0.38 -0.15 16 38 H 0.09 0.25 7.55 -51.93 -0.39 -0.14 16 39 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 40 H 0.13 -0.37 4.83 -52.49 -0.25 -0.63 16 41 H 0.12 -0.14 7.96 -51.92 -0.41 -0.56 16 42 H 0.38 -0.68 8.70 45.56 0.40 -0.28 16 43 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 44 H -0.26 -0.02 7.01 56.52 0.40 0.37 16 45 H 0.14 0.06 6.30 -52.48 -0.33 -0.27 16 LS Contribution 379.45 15.07 5.72 5.72 Total: 0.00 -14.98 379.45 -7.60 -22.58 By element: Atomic # 1 Polarization: -9.73 SS G_CDS: -4.85 Total: -14.58 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -1.61 Total: 1.21 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: 0.06 Total: 2.08 kcal Atomic # 8 Polarization: -9.04 SS G_CDS: -1.84 Total: -10.88 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.08 Total: -6.14 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -14.98 -7.60 -22.58 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_60476.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.066 kcal (2) G-P(sol) polarization free energy of solvation -14.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.599 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds