Wall clock time and date at job start Sat Mar 6 2021 22:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34771 * 1 3 3 O 1.21283 * 119.99955 * 2 1 4 4 C 1.50702 * 120.00065 * 180.02562 * 2 1 3 5 5 N 1.46501 * 112.84460 * 323.89368 * 4 2 1 6 6 C 1.34777 * 120.00366 * 293.72807 * 5 4 2 7 7 O 1.21277 * 119.99767 * 354.99252 * 6 5 4 8 8 C 1.50703 * 119.99887 * 174.99239 * 6 5 4 9 9 O 1.42894 * 109.46856 * 180.02562 * 8 6 5 10 10 C 1.35919 * 117.00035 * 179.97438 * 9 8 6 11 11 C 1.38679 * 120.05656 * 0.02562 * 10 9 8 12 12 C 1.38189 * 119.95352 * 179.74936 * 11 10 9 13 13 C 1.38236 * 120.07055 * 0.47631 * 12 11 10 14 14 C 1.50699 * 119.94181 * 179.76743 * 13 12 11 15 15 O 1.42905 * 109.46968 * 119.72509 * 14 13 12 16 16 Si 1.86301 * 109.47119 * 359.73298 * 14 13 12 17 17 C 1.38290 * 120.11928 * 359.50114 * 13 12 11 18 18 C 1.38193 * 120.04209 * 0.27006 * 17 13 12 19 19 Br 1.89103 * 120.03471 * 179.97438 * 18 17 13 20 20 C 1.53785 * 113.61439 * 192.70287 * 4 2 1 21 21 C 1.53777 * 87.07881 * 270.79586 * 20 4 2 22 22 H 1.09003 * 113.61564 * 89.19928 * 21 20 4 23 23 O 1.42895 * 113.61673 * 220.02049 * 21 20 4 24 24 C 1.53775 * 113.69322 * 95.16669 * 4 2 1 25 25 H 0.96992 * 120.00422 * 174.98566 * 1 2 3 26 26 H 0.97002 * 119.99662 * 354.98150 * 1 2 3 27 27 H 0.97002 * 119.99349 * 113.73349 * 5 4 2 28 28 H 1.08998 * 109.47338 * 59.99882 * 8 6 5 29 29 H 1.09002 * 109.46936 * 299.99896 * 8 6 5 30 30 H 1.07998 * 120.02499 * 359.96999 * 11 10 9 31 31 H 1.08002 * 119.96380 * 180.23168 * 12 11 10 32 32 H 1.08997 * 109.47441 * 239.72908 * 14 13 12 33 33 H 0.96701 * 114.00016 * 180.02562 * 15 14 13 34 34 H 1.48502 * 109.99616 * 298.67475 * 16 14 13 35 35 H 1.48501 * 110.00162 * 59.99384 * 16 14 13 36 36 H 1.07993 * 119.97733 * 180.25405 * 17 13 12 37 37 H 1.08997 * 113.61238 * 25.34724 * 20 4 2 38 38 H 1.09001 * 113.61191 * 156.25086 * 20 4 2 39 39 H 0.96702 * 114.00819 * 180.02562 * 23 21 20 40 40 H 1.08998 * 113.61293 * 203.68067 * 24 4 2 41 41 H 1.09007 * 113.61497 * 334.57666 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4410 -2.3434 0.7945 6 6 1.3385 -2.2055 2.1313 7 8 1.8713 -1.2683 2.6868 8 6 0.5619 -3.2159 2.9357 9 8 0.5986 -2.8543 4.3177 10 6 -0.0589 -3.6673 5.1860 11 6 -0.7249 -4.7900 4.7176 12 6 -1.3884 -5.6180 5.6029 13 6 -1.3972 -5.3231 6.9534 14 6 -2.1260 -6.2252 7.9157 15 8 -1.2015 -6.7481 8.8718 16 14 -2.9097 -7.6307 6.9769 17 6 -0.7337 -4.2046 7.4238 18 6 -0.0647 -3.3758 6.5433 19 35 0.8420 -1.8461 7.1866 20 6 3.5997 -1.1514 0.3093 21 6 3.8132 -0.9687 -1.2025 22 1 3.7379 0.0676 -1.5320 23 8 4.9810 -1.6254 -1.6993 24 6 2.5200 -1.7762 -1.4032 25 1 -0.4850 -0.8367 -0.0734 26 1 -0.4850 0.8369 0.0735 27 1 1.0776 -3.1302 0.3588 28 1 1.0064 -4.2027 2.8061 29 1 -0.4726 -3.2355 2.5930 30 1 -0.7221 -5.0189 3.6622 31 1 -1.9040 -6.4944 5.2388 32 1 -2.8998 -5.6568 8.4316 33 1 -1.6022 -7.3389 9.5240 34 1 -3.8967 -7.1020 6.0014 35 1 -1.8651 -8.4136 6.2689 36 1 -0.7385 -3.9786 8.4798 37 1 3.8356 -0.2625 0.8943 38 1 4.0579 -2.0562 0.7088 39 1 5.1210 -1.5138 -2.6496 40 1 2.6831 -2.8517 -1.4719 41 1 1.8844 -1.3917 -2.2009 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_6201210.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:41:58 Heat of formation + Delta-G solvation = -122.245357 kcal Electronic energy + Delta-G solvation = -29249.405906 eV Core-core repulsion = 24757.933507 eV Total energy + Delta-G solvation = -4491.472399 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.040 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.44167 -41.64372 -40.29035 -39.18043 -38.92253 -37.27752 -36.50288 -34.95222 -34.15501 -33.73486 -32.11654 -30.67081 -29.80622 -27.16010 -26.66156 -26.09162 -24.21617 -23.14694 -22.35915 -21.72686 -20.54829 -19.77188 -19.24333 -18.67369 -18.41086 -18.27557 -17.73918 -17.58528 -17.38375 -16.89324 -16.71975 -16.08383 -15.96970 -15.90662 -15.63516 -15.51837 -15.25215 -14.75371 -14.71267 -14.23004 -14.07219 -13.92917 -13.81249 -13.61596 -13.58506 -13.37141 -12.69516 -12.61689 -12.32745 -12.22553 -12.02315 -11.90586 -11.85395 -11.60871 -11.29938 -11.11324 -11.00223 -10.85181 -10.39792 -10.31835 -10.08774 -9.41995 -4.88238 -0.22439 -0.00639 0.52437 1.06229 1.28051 1.33547 1.37862 1.69269 1.97514 2.23654 2.25288 2.29491 3.05088 3.17588 3.25112 3.33898 3.43990 3.54547 3.55411 3.59772 3.79170 3.85003 3.92677 3.96437 3.97801 4.10392 4.21638 4.44346 4.50769 4.53019 4.57542 4.70881 4.72560 4.80335 4.80632 4.85874 5.09320 5.14330 5.33137 5.66460 5.91592 6.19734 6.30258 6.80597 6.91834 6.98275 7.09764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.829 5.829 2 C 0.530 3.470 3 O -0.576 6.576 4 C 0.134 3.866 5 N -0.690 5.690 6 C 0.512 3.488 7 O -0.550 6.550 8 C 0.032 3.968 9 O -0.302 6.302 10 C 0.150 3.850 11 C -0.188 4.188 12 C -0.076 4.076 13 C -0.119 4.119 14 C -0.083 4.083 15 O -0.567 6.567 16 Si 0.776 3.224 17 C -0.031 4.031 18 C -0.142 4.142 19 Br -0.047 7.047 20 C -0.119 4.119 21 C 0.079 3.921 22 H 0.083 0.917 23 O -0.570 6.570 24 C -0.127 4.127 25 H 0.417 0.583 26 H 0.409 0.591 27 H 0.432 0.568 28 H 0.132 0.868 29 H 0.139 0.861 30 H 0.181 0.819 31 H 0.140 0.860 32 H 0.093 0.907 33 H 0.404 0.596 34 H -0.278 1.278 35 H -0.289 1.289 36 H 0.145 0.855 37 H 0.053 0.947 38 H 0.098 0.902 39 H 0.400 0.600 40 H 0.137 0.863 41 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.916 -11.003 -5.297 15.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.392 5.392 2 C 0.312 3.688 3 O -0.454 6.454 4 C 0.044 3.956 5 N -0.349 5.349 6 C 0.298 3.702 7 O -0.426 6.426 8 C -0.046 4.046 9 O -0.215 6.215 10 C 0.102 3.898 11 C -0.207 4.207 12 C -0.094 4.094 13 C -0.121 4.121 14 C -0.192 4.192 15 O -0.377 6.377 16 Si 0.680 3.320 17 C -0.051 4.051 18 C -0.222 4.222 19 Br 0.039 6.961 20 C -0.158 4.158 21 C 0.020 3.980 22 H 0.101 0.899 23 O -0.378 6.378 24 C -0.165 4.165 25 H 0.249 0.751 26 H 0.241 0.759 27 H 0.273 0.727 28 H 0.150 0.850 29 H 0.157 0.843 30 H 0.198 0.802 31 H 0.157 0.843 32 H 0.110 0.890 33 H 0.255 0.745 34 H -0.204 1.204 35 H -0.217 1.217 36 H 0.163 0.837 37 H 0.072 0.928 38 H 0.117 0.883 39 H 0.251 0.749 40 H 0.155 0.845 41 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -8.234 -9.166 -5.111 13.339 hybrid contribution -0.332 0.475 -0.553 0.801 sum -8.566 -8.691 -5.664 13.453 Atomic orbital electron populations 1.43583 1.05924 1.14373 1.75355 1.20367 0.83743 0.90089 0.74551 1.90772 1.69342 1.34302 1.50990 1.21326 0.91780 0.86589 0.95933 1.45449 1.60431 1.23905 1.05159 1.20641 0.80370 0.86223 0.82992 1.90866 1.46346 1.34267 1.71079 1.22889 1.03861 0.98814 0.79015 1.86254 1.69189 1.48691 1.17348 1.18689 0.92263 0.90412 0.88401 1.21473 1.01753 0.94651 1.02773 1.21063 0.97145 0.98551 0.92651 1.19673 1.01691 0.96443 0.94253 1.24916 0.94942 1.03709 0.95590 1.86450 1.37448 1.68246 1.45544 0.93959 0.78246 0.78938 0.80859 1.20929 0.92743 0.91842 0.99593 1.21343 1.08452 0.99063 0.93325 1.96774 1.76325 1.35615 1.87408 1.23233 0.92932 1.02992 0.96672 1.23107 0.85179 0.95813 0.93936 0.89899 1.86492 1.44868 1.75833 1.30621 1.23921 0.96627 1.04092 0.91854 0.75142 0.75907 0.72676 0.85015 0.84330 0.80195 0.84251 0.88954 0.74473 1.20442 1.21671 0.83716 0.92802 0.88344 0.74941 0.84543 0.87572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.10 8.78 -173.53 -1.52 1.58 16 2 C 0.53 2.48 6.60 87.66 0.58 3.06 16 3 O -0.58 -8.83 16.21 -3.04 -0.05 -8.88 16 4 C 0.13 -0.12 1.05 3.38 0.00 -0.12 16 5 N -0.69 5.07 4.79 -423.92 -2.03 3.04 16 6 C 0.51 0.25 7.56 87.66 0.66 0.92 16 7 O -0.55 -7.69 15.54 16.02 0.25 -7.44 16 8 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 9 O -0.30 -1.57 9.01 -73.60 -0.66 -2.24 16 10 C 0.15 0.63 6.68 22.52 0.15 0.78 16 11 C -0.19 0.39 9.04 22.36 0.20 0.59 16 12 C -0.08 0.01 8.66 22.26 0.19 0.20 16 13 C -0.12 -0.28 5.42 -19.85 -0.11 -0.39 16 14 C -0.08 0.25 2.81 71.24 0.20 0.45 16 15 O -0.57 1.00 12.74 -148.98 -1.90 -0.90 16 16 Si 0.78 -4.77 29.78 68.60 2.04 -2.72 16 17 C -0.03 -0.17 9.35 22.27 0.21 0.04 16 18 C -0.14 -1.09 6.24 22.40 0.14 -0.95 16 19 Br -0.05 -0.50 33.16 -20.37 -0.68 -1.18 16 20 C -0.12 -0.75 6.16 31.12 0.19 -0.56 16 21 C 0.08 0.10 4.82 31.12 0.15 0.25 16 22 H 0.08 0.32 7.63 -2.39 -0.02 0.30 16 23 O -0.57 -0.62 13.67 -148.98 -2.04 -2.66 16 24 C -0.13 0.90 7.21 31.12 0.22 1.12 16 25 H 0.42 -4.77 8.47 -92.71 -0.79 -5.56 16 26 H 0.41 -1.56 8.93 -92.71 -0.83 -2.39 16 27 H 0.43 -7.52 8.71 -92.71 -0.81 -8.32 16 28 H 0.13 -1.65 7.66 -2.39 -0.02 -1.66 16 29 H 0.14 -1.96 7.66 -2.39 -0.02 -1.98 16 30 H 0.18 -2.03 6.30 -2.91 -0.02 -2.05 16 31 H 0.14 -0.42 4.87 -2.91 -0.01 -0.44 16 32 H 0.09 -0.59 7.96 -2.39 -0.02 -0.61 16 33 H 0.40 -4.92 8.74 -74.06 -0.65 -5.57 16 34 H -0.28 0.63 7.11 99.48 0.71 1.34 16 35 H -0.29 -0.14 7.11 99.48 0.71 0.57 16 36 H 0.15 0.61 8.06 -2.91 -0.02 0.59 16 37 H 0.05 0.79 7.63 -2.39 -0.02 0.77 16 38 H 0.10 0.62 8.14 -2.39 -0.02 0.60 16 39 H 0.40 -3.21 9.12 -74.06 -0.68 -3.89 16 40 H 0.14 -1.59 8.14 -2.39 -0.02 -1.61 16 41 H 0.11 -1.11 8.10 -2.38 -0.02 -1.12 16 Total: 0.00 -40.91 370.84 -5.95 -46.86 By element: Atomic # 1 Polarization: -28.51 SS G_CDS: -2.54 Total: -31.04 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: 3.17 Total: 5.58 kcal Atomic # 7 Polarization: 8.18 SS G_CDS: -3.55 Total: 4.62 kcal Atomic # 8 Polarization: -17.71 SS G_CDS: -4.40 Total: -22.11 kcal Atomic # 14 Polarization: -4.77 SS G_CDS: 2.04 Total: -2.72 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.18 kcal Total: -40.91 -5.95 -46.86 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6201210.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.387 kcal (2) G-P(sol) polarization free energy of solvation -40.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.859 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds