Wall clock time and date at job start Sat Mar 6 2021 22:42:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34782 * 1 3 3 O 1.21279 * 120.00021 * 2 1 4 4 C 1.50696 * 120.00033 * 179.97438 * 2 1 3 5 5 N 1.46497 * 112.85065 * 323.90787 * 4 2 1 6 6 C 1.34779 * 119.99777 * 293.52496 * 5 4 2 7 7 O 1.21694 * 120.00090 * 355.00256 * 6 5 4 8 8 C 1.46678 * 119.99803 * 174.99352 * 6 5 4 9 9 C 1.37873 * 126.23189 * 179.97438 * 8 6 5 10 10 C 1.39838 * 107.08563 * 179.78676 * 9 8 6 11 11 C 1.35458 * 107.86142 * 0.35957 * 10 9 8 12 12 C 1.50700 * 125.56078 * 179.90246 * 11 10 9 13 13 O 1.42897 * 109.46895 * 244.69572 * 12 11 10 14 14 Si 1.86301 * 109.47113 * 4.69136 * 12 11 10 15 15 N 1.35525 * 108.87479 * 359.63763 * 11 10 9 16 16 C 1.53777 * 113.61621 * 192.70434 * 4 2 1 17 17 C 1.53780 * 87.08592 * 270.80460 * 16 4 2 18 18 H 1.08995 * 113.61494 * 89.20046 * 17 16 4 19 19 O 1.42896 * 113.61249 * 220.02112 * 17 16 4 20 20 C 1.53783 * 87.08001 * 334.56533 * 17 16 4 21 21 H 0.97000 * 120.00016 * 174.97901 * 1 2 3 22 22 H 0.96999 * 120.00009 * 354.98032 * 1 2 3 23 23 H 0.96999 * 120.00101 * 113.53164 * 5 4 2 24 24 H 1.08003 * 126.45767 * 359.97393 * 9 8 6 25 25 H 1.08001 * 126.07048 * 180.22843 * 10 9 8 26 26 H 1.09000 * 109.47483 * 124.69522 * 12 11 10 27 27 H 0.96699 * 114.00535 * 60.00310 * 13 12 11 28 28 H 1.48503 * 109.99922 * 58.68406 * 14 12 11 29 29 H 1.48503 * 109.99694 * 180.02562 * 14 12 11 30 30 H 0.97005 * 125.67979 * 180.24494 * 15 11 10 31 31 H 1.08996 * 113.61301 * 25.35407 * 16 4 2 32 32 H 1.09008 * 113.61590 * 156.25165 * 16 4 2 33 33 H 0.96710 * 113.99679 * 179.97438 * 19 17 16 34 34 H 1.09001 * 113.61718 * 270.88670 * 20 17 16 35 35 H 1.09003 * 113.61500 * 139.97907 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4410 -2.3428 0.7963 6 6 1.3420 -2.2058 2.1335 7 8 1.8795 -1.2667 2.6903 8 6 0.5862 -3.1885 2.9174 9 6 0.4032 -3.1740 4.2838 10 6 -0.3794 -4.2874 4.6054 11 6 -0.6479 -4.9523 3.4562 12 6 -1.4624 -6.2153 3.3442 13 8 -0.6277 -7.2814 2.8873 14 14 -2.1669 -6.6499 5.0132 15 7 -0.0695 -4.2932 2.4229 16 6 3.5997 -1.1512 0.3104 17 6 3.8134 -0.9695 -1.2016 18 1 3.7382 0.0665 -1.5318 19 8 4.9813 -1.6266 -1.6976 20 6 2.5202 -1.7773 -1.4018 21 1 -0.4850 -0.8368 -0.0735 22 1 -0.4850 0.8368 0.0735 23 1 1.0752 -3.1286 0.3609 24 1 0.7888 -2.4393 4.9752 25 1 -0.7092 -4.5686 5.5946 26 1 -2.2759 -6.0615 2.6353 27 1 0.1189 -7.4742 3.4709 28 1 -3.0115 -5.5357 5.5138 29 1 -2.9718 -7.8941 4.9163 30 1 -0.1109 -4.5560 1.4900 31 1 3.8356 -0.2618 0.8947 32 1 4.0580 -2.0556 0.7106 33 1 5.1209 -1.5163 -2.6482 34 1 2.6833 -2.8529 -1.4697 35 1 1.8846 -1.3933 -2.1998 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_6580494.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:05 Heat of formation + Delta-G solvation = -82.579161 kcal Electronic energy + Delta-G solvation = -22535.835066 eV Core-core repulsion = 18922.920766 eV Total energy + Delta-G solvation = -3612.914300 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.109 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.73051 -42.08530 -39.91954 -39.04595 -37.65216 -36.53844 -34.96460 -34.16379 -32.13578 -31.32699 -27.54189 -27.11997 -26.06989 -23.74906 -22.67480 -21.59431 -21.18892 -20.52523 -19.97082 -19.17042 -18.46228 -18.12648 -17.76676 -16.91045 -16.70465 -16.45201 -16.10033 -15.91183 -15.63049 -15.25793 -15.14298 -14.74161 -14.53712 -14.39450 -13.99286 -13.93263 -13.67311 -13.56486 -13.36992 -12.67637 -12.20848 -12.08228 -11.91534 -11.64555 -11.31442 -11.05088 -10.86908 -10.64788 -10.45763 -10.08044 -9.31198 -4.89262 0.23729 1.17623 1.24221 1.51890 1.70832 1.76643 1.94612 2.12033 2.20549 2.29561 3.03745 3.16520 3.37980 3.49211 3.54199 3.59132 3.65733 3.82668 4.09308 4.24627 4.31095 4.46021 4.48927 4.54801 4.71061 4.78177 4.83989 4.95037 5.10037 5.12396 5.55237 5.65177 5.76302 6.14340 6.21964 6.40513 6.69506 6.80432 6.91169 7.06590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.532 3.468 3 O -0.572 6.572 4 C 0.132 3.868 5 N -0.699 5.699 6 C 0.591 3.409 7 O -0.556 6.556 8 C -0.062 4.062 9 C -0.116 4.116 10 C -0.205 4.205 11 C 0.034 3.966 12 C -0.051 4.051 13 O -0.554 6.554 14 Si 0.797 3.203 15 N -0.508 5.508 16 C -0.116 4.116 17 C 0.082 3.918 18 H 0.086 0.914 19 O -0.569 6.569 20 C -0.132 4.132 21 H 0.414 0.586 22 H 0.410 0.590 23 H 0.419 0.581 24 H 0.142 0.858 25 H 0.169 0.831 26 H 0.120 0.880 27 H 0.399 0.601 28 H -0.287 1.287 29 H -0.296 1.296 30 H 0.430 0.570 31 H 0.059 0.941 32 H 0.098 0.902 33 H 0.400 0.600 34 H 0.132 0.868 35 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.267 -7.349 -3.240 9.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.315 3.685 3 O -0.450 6.450 4 C 0.041 3.959 5 N -0.354 5.354 6 C 0.380 3.620 7 O -0.433 6.433 8 C -0.176 4.176 9 C -0.143 4.143 10 C -0.229 4.229 11 C -0.085 4.085 12 C -0.161 4.161 13 O -0.361 6.361 14 Si 0.702 3.298 15 N -0.106 5.106 16 C -0.155 4.155 17 C 0.022 3.978 18 H 0.104 0.896 19 O -0.377 6.377 20 C -0.170 4.170 21 H 0.245 0.755 22 H 0.242 0.758 23 H 0.258 0.742 24 H 0.160 0.840 25 H 0.186 0.814 26 H 0.137 0.863 27 H 0.250 0.750 28 H -0.214 1.214 29 H -0.224 1.224 30 H 0.270 0.730 31 H 0.078 0.922 32 H 0.116 0.884 33 H 0.251 0.749 34 H 0.150 0.850 35 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -4.422 -6.414 -2.455 8.168 hybrid contribution -0.670 0.392 -1.440 1.636 sum -5.092 -6.021 -3.895 8.795 Atomic orbital electron populations 1.43592 1.06032 1.14245 1.75427 1.20300 0.83639 0.90025 0.74559 1.90766 1.69223 1.34079 1.50909 1.21381 0.92091 0.86521 0.95881 1.45547 1.60549 1.23633 1.05703 1.17339 0.78905 0.83969 0.81796 1.90922 1.47478 1.33650 1.71232 1.20095 1.09087 0.94061 0.94346 1.21487 1.00253 0.99599 0.92929 1.20949 1.05591 0.97689 0.98665 1.21331 1.01860 0.97599 0.87724 1.24968 0.95232 0.82730 1.13154 1.86480 1.44333 1.51456 1.53873 0.92982 0.83155 0.76704 0.77004 1.41846 1.39519 1.19062 1.10171 1.23218 0.92398 1.03217 0.96693 1.23091 0.84911 0.95795 0.93975 0.89583 1.86495 1.44755 1.75890 1.30596 1.23946 0.97079 1.03948 0.91986 0.75499 0.75803 0.74170 0.84005 0.81425 0.86271 0.75033 1.21361 1.22398 0.73011 0.92183 0.88394 0.74937 0.84983 0.87622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.03 8.78 -173.53 -1.52 0.51 16 2 C 0.53 2.82 6.61 87.65 0.58 3.40 16 3 O -0.57 -8.57 16.21 -3.03 -0.05 -8.62 16 4 C 0.13 0.04 1.05 3.38 0.00 0.05 16 5 N -0.70 2.82 4.78 -427.84 -2.05 0.77 16 6 C 0.59 2.14 7.44 86.45 0.64 2.78 16 7 O -0.56 -7.74 15.92 -4.33 -0.07 -7.81 16 8 C -0.06 -0.02 7.05 40.35 0.28 0.27 16 9 C -0.12 -0.24 10.65 22.57 0.24 0.00 16 10 C -0.21 0.58 9.32 22.01 0.21 0.78 16 11 C 0.03 -0.18 6.47 41.35 0.27 0.09 16 12 C -0.05 0.36 3.08 71.24 0.22 0.58 16 13 O -0.55 3.71 12.88 -148.98 -1.92 1.79 16 14 Si 0.80 -5.32 30.56 68.60 2.10 -3.22 16 15 N -0.51 3.16 5.99 -171.93 -1.03 2.13 16 16 C -0.12 -0.74 6.14 31.12 0.19 -0.55 16 17 C 0.08 0.12 4.82 31.12 0.15 0.27 16 18 H 0.09 0.30 7.63 -2.39 -0.02 0.28 16 19 O -0.57 -0.63 13.67 -148.98 -2.04 -2.67 16 20 C -0.13 0.77 7.21 31.12 0.22 0.99 16 21 H 0.41 -3.68 8.47 -92.71 -0.79 -4.47 16 22 H 0.41 -1.26 8.93 -92.71 -0.83 -2.09 16 23 H 0.42 -5.11 7.85 -92.71 -0.73 -5.84 16 24 H 0.14 0.52 8.06 -2.91 -0.02 0.50 16 25 H 0.17 -1.17 6.19 -2.91 -0.02 -1.19 16 26 H 0.12 -0.92 7.96 -2.39 -0.02 -0.94 16 27 H 0.40 -5.36 8.70 -74.06 -0.64 -6.00 16 28 H -0.29 0.23 7.11 99.48 0.71 0.93 16 29 H -0.30 -0.22 7.11 99.48 0.71 0.48 16 30 H 0.43 -5.22 8.20 -92.70 -0.76 -5.98 16 31 H 0.06 0.82 7.63 -2.39 -0.02 0.80 16 32 H 0.10 0.64 8.14 -2.38 -0.02 0.62 16 33 H 0.40 -3.20 9.12 -74.05 -0.68 -3.87 16 34 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 35 H 0.11 -0.98 8.10 -2.39 -0.02 -1.00 16 Total: 0.00 -30.81 305.98 -6.73 -37.54 By element: Atomic # 1 Polarization: -25.91 SS G_CDS: -3.16 Total: -29.07 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: 3.01 Total: 8.66 kcal Atomic # 7 Polarization: 8.01 SS G_CDS: -4.60 Total: 3.41 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: -4.07 Total: -17.32 kcal Atomic # 14 Polarization: -5.32 SS G_CDS: 2.10 Total: -3.22 kcal Total: -30.81 -6.73 -37.54 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6580494.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.038 kcal (2) G-P(sol) polarization free energy of solvation -30.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.579 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds