Wall clock time and date at job start Sat Mar 6 2021 22:42:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35962 * 116.99788 * 2 1 4 4 C 1.39449 * 120.11934 * 180.02562 * 3 2 1 5 5 O 1.34781 * 133.24233 * 359.93098 * 4 3 2 6 6 C 1.34925 * 110.83892 * 180.02562 * 5 4 3 7 7 C 1.46997 * 125.13923 * 179.97438 * 6 5 4 8 8 O 1.21648 * 120.00110 * 180.02562 * 7 6 5 9 9 N 1.34782 * 119.99367 * 0.02576 * 7 6 5 10 10 C 1.46499 * 119.99464 * 185.00657 * 9 7 6 11 11 C 1.50699 * 112.85198 * 66.33943 * 10 9 7 12 12 N 1.34774 * 120.00118 * 25.24056 * 11 10 9 13 13 O 1.21281 * 120.00388 * 205.24296 * 11 10 9 14 14 C 1.53779 * 113.61575 * 295.14474 * 10 9 7 15 15 C 1.53782 * 87.08422 * 220.01927 * 14 10 9 16 16 H 1.09001 * 113.61330 * 270.88620 * 15 14 10 17 17 O 1.42897 * 113.61558 * 140.06418 * 15 14 10 18 18 C 1.53778 * 87.07720 * 25.43156 * 15 14 10 19 19 C 1.35810 * 109.72364 * 0.24706 * 6 5 4 20 20 C 1.40608 * 119.13828 * 179.97438 * 4 3 2 21 21 C 1.39781 * 120.11826 * 0.02562 * 20 4 3 22 22 C 1.50698 * 120.09583 * 179.97438 * 21 20 4 23 23 O 1.42906 * 109.47037 * 74.99654 * 22 21 20 24 24 Si 1.86294 * 109.47352 * 194.99857 * 22 21 20 25 25 C 1.36628 * 119.81340 * 359.97438 * 21 20 4 26 26 C 1.38256 * 120.12283 * 359.96172 * 3 2 1 27 27 H 1.08997 * 109.47236 * 299.99715 * 1 2 3 28 28 H 1.09001 * 109.46883 * 60.00186 * 1 2 3 29 29 H 1.09009 * 109.47139 * 179.97438 * 1 2 3 30 30 H 0.96993 * 120.00350 * 5.00752 * 9 7 6 31 31 H 0.97004 * 119.99751 * 355.00943 * 12 11 10 32 32 H 0.96997 * 120.00649 * 175.01388 * 12 11 10 33 33 H 1.09007 * 113.61901 * 105.47100 * 14 10 9 34 34 H 1.08997 * 113.69287 * 334.57755 * 14 10 9 35 35 H 0.96702 * 113.99705 * 181.53546 * 17 15 14 36 36 H 1.08999 * 113.62011 * 89.11997 * 18 15 14 37 37 H 1.09002 * 113.61220 * 220.02201 * 18 15 14 38 38 H 1.08001 * 126.95734 * 179.75521 * 19 6 5 39 39 H 1.08996 * 109.47200 * 314.99778 * 22 21 20 40 40 H 0.96697 * 113.99926 * 60.00148 * 23 22 21 41 41 H 1.48499 * 110.00324 * 180.02562 * 24 22 21 42 42 H 1.48506 * 109.99922 * 301.32001 * 24 22 21 43 43 H 1.08002 * 119.75617 * 180.02562 * 25 21 20 44 44 H 1.08005 * 119.66331 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4142 0.3573 0.0001 6 6 5.6317 0.9387 -0.0004 7 6 6.9132 0.2185 0.0006 8 8 7.9596 0.8389 0.0006 9 7 6.9287 -1.1292 0.0016 10 6 8.2009 -1.8470 0.1133 11 6 8.8696 -1.6483 1.4491 12 7 8.1312 -1.3369 2.5327 13 8 10.0723 -1.7684 1.5491 14 6 9.1398 -1.6265 -1.0844 15 6 9.4934 -3.1196 -0.9818 16 1 10.3307 -3.3252 -0.3149 17 8 9.6221 -3.7659 -2.2497 18 6 8.1181 -3.3191 -0.3233 19 6 5.4944 2.2898 0.0042 20 6 4.0554 2.5510 -0.0011 21 6 3.2765 3.7117 -0.0005 22 6 3.9381 5.0657 -0.0005 23 8 4.4601 5.3408 -1.3021 24 14 2.6866 6.3683 0.4548 25 6 1.9137 3.6151 0.0000 26 6 1.2957 2.3725 -0.0008 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 6.0976 -1.6239 -0.0717 31 1 7.1802 -1.1696 2.4398 32 1 8.5506 -1.2801 3.4055 33 1 9.9773 -0.9635 -0.8666 34 1 8.6202 -1.3632 -2.0057 35 1 9.8213 -4.7103 -2.1913 36 1 7.3177 -3.5189 -1.0357 37 1 8.1305 -4.0227 0.5091 38 1 6.2874 3.0230 0.0088 39 1 4.7507 5.0730 0.7258 40 1 3.7911 5.3501 -2.0002 41 1 3.3264 7.7084 0.4577 42 1 1.5576 6.3472 -0.5098 43 1 1.3127 4.5125 0.0000 44 1 0.2174 2.3120 -0.0010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_6672420.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:08 Heat of formation + Delta-G solvation = -108.204305 kcal Electronic energy + Delta-G solvation = -33173.475116 eV Core-core repulsion = 28447.295113 eV Total energy + Delta-G solvation = -4726.180003 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.129 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.76380 -42.31023 -40.82201 -39.96937 -39.18544 -38.91980 -37.14586 -36.48065 -34.91308 -33.94668 -33.65112 -31.97922 -31.02469 -28.82318 -27.18090 -26.92730 -26.31453 -24.81968 -24.03670 -22.92572 -22.01191 -21.68985 -20.48644 -19.91180 -19.22420 -19.07532 -18.64672 -18.39303 -17.88793 -17.74755 -17.63956 -17.09640 -16.76607 -16.68023 -16.27974 -16.13037 -16.06264 -15.92934 -15.61713 -15.20421 -14.90009 -14.70070 -14.64541 -14.57088 -14.18886 -13.87527 -13.64998 -13.53416 -13.48723 -13.38725 -13.19493 -12.68482 -12.58893 -12.41532 -12.19015 -11.90228 -11.72403 -11.52131 -11.33189 -11.02608 -10.98927 -10.75511 -10.66125 -10.37383 -9.86058 -9.06800 -5.04043 -0.68346 0.04901 0.60889 1.11988 1.19522 1.37994 1.48367 1.72886 1.87820 1.88747 1.97187 2.30078 2.33573 3.03185 3.15083 3.17604 3.30318 3.42692 3.44695 3.54112 3.59300 3.72970 3.76311 3.80082 3.93870 4.02892 4.03666 4.09885 4.15304 4.39068 4.40076 4.42094 4.42927 4.55082 4.73977 4.75752 4.78751 4.82446 4.99499 5.02598 5.13779 5.16746 5.24839 5.52595 5.69380 6.02269 6.15908 6.20406 6.34964 6.65084 6.74352 7.13192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.048 3.952 5 O -0.174 6.174 6 C -0.029 4.029 7 C 0.601 3.399 8 O -0.490 6.490 9 N -0.708 5.708 10 C 0.125 3.875 11 C 0.541 3.459 12 N -0.846 5.846 13 O -0.524 6.524 14 C -0.105 4.105 15 C 0.083 3.917 16 H 0.101 0.899 17 O -0.554 6.554 18 C -0.154 4.154 19 C -0.097 4.097 20 C -0.082 4.082 21 C -0.093 4.093 22 C -0.074 4.074 23 O -0.525 6.525 24 Si 0.692 3.308 25 C -0.096 4.096 26 C -0.176 4.176 27 H 0.062 0.938 28 H 0.060 0.940 29 H 0.106 0.894 30 H 0.414 0.586 31 H 0.401 0.599 32 H 0.407 0.593 33 H 0.095 0.905 34 H 0.103 0.897 35 H 0.382 0.618 36 H 0.112 0.888 37 H 0.086 0.914 38 H 0.175 0.825 39 H 0.119 0.881 40 H 0.376 0.624 41 H -0.255 1.255 42 H -0.258 1.258 43 H 0.141 0.859 44 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.559 -2.365 2.997 10.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.079 4.079 7 C 0.386 3.614 8 O -0.364 6.364 9 N -0.363 5.363 10 C 0.035 3.965 11 C 0.323 3.677 12 N -0.409 5.409 13 O -0.399 6.399 14 C -0.144 4.144 15 C 0.023 3.977 16 H 0.119 0.881 17 O -0.359 6.359 18 C -0.192 4.192 19 C -0.118 4.118 20 C -0.084 4.084 21 C -0.094 4.094 22 C -0.184 4.184 23 O -0.331 6.331 24 Si 0.593 3.407 25 C -0.113 4.113 26 C -0.195 4.195 27 H 0.080 0.920 28 H 0.079 0.921 29 H 0.124 0.876 30 H 0.251 0.749 31 H 0.229 0.771 32 H 0.238 0.762 33 H 0.113 0.887 34 H 0.122 0.878 35 H 0.230 0.770 36 H 0.130 0.870 37 H 0.104 0.896 38 H 0.193 0.807 39 H 0.137 0.863 40 H 0.223 0.777 41 H -0.179 1.179 42 H -0.183 1.183 43 H 0.158 0.842 44 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -7.935 -1.177 2.768 8.486 hybrid contribution -1.006 -0.716 -0.614 1.379 sum -8.942 -1.892 2.154 9.390 Atomic orbital electron populations 1.23200 0.77240 1.04808 1.01828 1.86171 1.22214 1.25647 1.88356 1.17737 0.86482 0.85909 0.99429 1.18763 0.87412 0.86912 1.06963 1.84044 1.12565 1.34679 1.76246 1.21825 0.83746 0.92522 1.09782 1.16718 0.85730 0.81913 0.77018 1.90981 1.30169 1.67166 1.48084 1.45851 1.09654 1.05736 1.75077 1.21661 0.85309 0.95317 0.94189 1.19857 0.86966 0.75684 0.85235 1.43717 1.13399 1.73263 1.10514 1.90790 1.13517 1.50373 1.85179 1.23252 0.99048 0.96006 0.96053 1.23235 0.95219 0.93544 0.85661 0.88112 1.86534 1.93878 1.27042 1.28496 1.23999 1.01463 0.91866 1.01872 1.22780 0.94868 0.94283 0.99863 1.19396 0.92547 0.92087 1.04336 1.19414 0.92821 0.94349 1.02847 1.25035 1.06873 0.97920 0.88530 1.86647 1.37574 1.92637 1.16240 0.94919 0.77517 0.77944 0.90360 1.20604 0.93492 0.97848 0.99396 1.20988 1.00416 0.90530 1.07574 0.91987 0.92132 0.87599 0.74873 0.77097 0.76151 0.88658 0.87838 0.77013 0.87000 0.89564 0.80745 0.86335 0.77673 1.17945 1.18290 0.84192 0.83447 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 101.05 0.99 0.91 16 2 O -0.31 -0.10 10.50 -19.62 -0.21 -0.31 16 3 C 0.15 0.09 6.70 -39.12 -0.26 -0.17 16 4 C 0.05 0.09 7.35 -38.24 -0.28 -0.19 16 5 O -0.17 -0.29 10.29 2.65 0.03 -0.26 16 6 C -0.03 -0.05 7.07 -36.90 -0.26 -0.31 16 7 C 0.60 1.17 7.19 -12.71 -0.09 1.08 16 8 O -0.49 -2.54 15.87 5.24 0.08 -2.45 16 9 N -0.71 0.44 4.43 -49.12 -0.22 0.23 16 10 C 0.13 0.07 1.11 -132.16 -0.15 -0.07 16 11 C 0.54 1.29 6.68 -10.99 -0.07 1.22 16 12 N -0.85 0.48 8.77 31.22 0.27 0.75 16 13 O -0.52 -3.14 16.07 5.56 0.09 -3.05 16 14 C -0.10 -0.25 6.16 -25.92 -0.16 -0.41 16 15 C 0.08 0.07 4.80 -25.92 -0.12 -0.06 16 16 H 0.10 0.14 7.32 -51.93 -0.38 -0.24 16 17 O -0.55 -0.53 13.67 -35.23 -0.48 -1.01 16 18 C -0.15 0.22 7.21 -25.92 -0.19 0.03 16 19 C -0.10 -0.18 10.68 -37.23 -0.40 -0.58 16 20 C -0.08 -0.13 6.16 -105.21 -0.65 -0.77 16 21 C -0.09 0.01 5.26 -104.63 -0.55 -0.54 16 22 C -0.07 0.04 2.70 36.00 0.10 0.14 16 23 O -0.52 -0.54 12.88 -35.23 -0.45 -0.99 16 24 Si 0.69 -1.32 30.25 -169.99 -5.14 -6.46 16 25 C -0.10 0.14 8.62 -39.96 -0.34 -0.20 16 26 C -0.18 0.26 9.03 -39.38 -0.36 -0.09 16 27 H 0.06 -0.30 7.66 -51.93 -0.40 -0.70 16 28 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 29 H 0.11 -0.51 8.14 -51.92 -0.42 -0.93 16 30 H 0.41 -1.16 8.43 -40.82 -0.34 -1.51 16 31 H 0.40 -0.95 7.88 -40.82 -0.32 -1.27 16 32 H 0.41 -0.61 8.93 -40.82 -0.36 -0.97 16 33 H 0.09 0.42 7.85 -51.93 -0.41 0.02 16 34 H 0.10 0.26 8.14 -51.93 -0.42 -0.16 16 35 H 0.38 -1.28 9.12 45.56 0.42 -0.86 16 36 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 38 H 0.18 0.26 8.06 -52.49 -0.42 -0.16 16 39 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 40 H 0.38 -0.72 8.70 45.56 0.40 -0.33 16 41 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 42 H -0.26 0.18 6.69 56.52 0.38 0.56 16 43 H 0.14 -0.46 4.81 -52.49 -0.25 -0.72 16 44 H 0.15 -0.61 6.26 -52.48 -0.33 -0.94 16 LS Contribution 376.23 15.07 5.67 5.67 Total: 0.00 -11.41 376.23 -7.28 -18.69 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -4.13 Total: -10.77 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -2.79 Total: -0.03 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: 0.06 Total: 0.98 kcal Atomic # 8 Polarization: -7.15 SS G_CDS: -0.94 Total: -8.09 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.14 Total: -6.46 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -11.41 -7.28 -18.69 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6672420.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.510 kcal (2) G-P(sol) polarization free energy of solvation -11.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.924 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.695 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds