Wall clock time and date at job start Sat Mar 6 2021 22:42:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35962 * 116.99788 * 2 1 4 4 C 1.39449 * 120.11934 * 180.02562 * 3 2 1 5 5 O 1.34781 * 133.24233 * 359.93098 * 4 3 2 6 6 C 1.34925 * 110.83892 * 180.02562 * 5 4 3 7 7 C 1.46997 * 125.13923 * 179.97438 * 6 5 4 8 8 O 1.21648 * 120.00110 * 180.02562 * 7 6 5 9 9 N 1.34782 * 119.99367 * 0.02576 * 7 6 5 10 10 C 1.46499 * 119.99464 * 185.00657 * 9 7 6 11 11 C 1.50699 * 112.85198 * 66.33943 * 10 9 7 12 12 N 1.34774 * 120.00118 * 25.24056 * 11 10 9 13 13 O 1.21281 * 120.00388 * 205.24296 * 11 10 9 14 14 C 1.53779 * 113.61575 * 295.14474 * 10 9 7 15 15 C 1.53782 * 87.08422 * 220.01927 * 14 10 9 16 16 H 1.09001 * 113.61330 * 270.88620 * 15 14 10 17 17 O 1.42897 * 113.61558 * 140.06418 * 15 14 10 18 18 C 1.53778 * 87.07720 * 25.43156 * 15 14 10 19 19 C 1.35810 * 109.72364 * 0.24706 * 6 5 4 20 20 C 1.40608 * 119.13828 * 179.97438 * 4 3 2 21 21 C 1.39781 * 120.11826 * 0.02562 * 20 4 3 22 22 C 1.50698 * 120.09583 * 179.97438 * 21 20 4 23 23 O 1.42906 * 109.47037 * 74.99654 * 22 21 20 24 24 Si 1.86294 * 109.47352 * 194.99857 * 22 21 20 25 25 C 1.36628 * 119.81340 * 359.97438 * 21 20 4 26 26 C 1.38256 * 120.12283 * 359.96172 * 3 2 1 27 27 H 1.08997 * 109.47236 * 299.99715 * 1 2 3 28 28 H 1.09001 * 109.46883 * 60.00186 * 1 2 3 29 29 H 1.09009 * 109.47139 * 179.97438 * 1 2 3 30 30 H 0.96993 * 120.00350 * 5.00752 * 9 7 6 31 31 H 0.97004 * 119.99751 * 355.00943 * 12 11 10 32 32 H 0.96997 * 120.00649 * 175.01388 * 12 11 10 33 33 H 1.09007 * 113.61901 * 105.47100 * 14 10 9 34 34 H 1.08997 * 113.69287 * 334.57755 * 14 10 9 35 35 H 0.96702 * 113.99705 * 181.53546 * 17 15 14 36 36 H 1.08999 * 113.62011 * 89.11997 * 18 15 14 37 37 H 1.09002 * 113.61220 * 220.02201 * 18 15 14 38 38 H 1.08001 * 126.95734 * 179.75521 * 19 6 5 39 39 H 1.08996 * 109.47200 * 314.99778 * 22 21 20 40 40 H 0.96697 * 113.99926 * 60.00148 * 23 22 21 41 41 H 1.48499 * 110.00324 * 180.02562 * 24 22 21 42 42 H 1.48506 * 109.99922 * 301.32001 * 24 22 21 43 43 H 1.08002 * 119.75617 * 180.02562 * 25 21 20 44 44 H 1.08005 * 119.66331 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4142 0.3573 0.0001 6 6 5.6317 0.9387 -0.0004 7 6 6.9132 0.2185 0.0006 8 8 7.9596 0.8389 0.0006 9 7 6.9287 -1.1292 0.0016 10 6 8.2009 -1.8470 0.1133 11 6 8.8696 -1.6483 1.4491 12 7 8.1312 -1.3369 2.5327 13 8 10.0723 -1.7684 1.5491 14 6 9.1398 -1.6265 -1.0844 15 6 9.4934 -3.1196 -0.9818 16 1 10.3307 -3.3252 -0.3149 17 8 9.6221 -3.7659 -2.2497 18 6 8.1181 -3.3191 -0.3233 19 6 5.4944 2.2898 0.0042 20 6 4.0554 2.5510 -0.0011 21 6 3.2765 3.7117 -0.0005 22 6 3.9381 5.0657 -0.0005 23 8 4.4601 5.3408 -1.3021 24 14 2.6866 6.3683 0.4548 25 6 1.9137 3.6151 0.0000 26 6 1.2957 2.3725 -0.0008 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 6.0976 -1.6239 -0.0717 31 1 7.1802 -1.1696 2.4398 32 1 8.5506 -1.2801 3.4055 33 1 9.9773 -0.9635 -0.8666 34 1 8.6202 -1.3632 -2.0057 35 1 9.8213 -4.7103 -2.1913 36 1 7.3177 -3.5189 -1.0357 37 1 8.1305 -4.0227 0.5091 38 1 6.2874 3.0230 0.0088 39 1 4.7507 5.0730 0.7258 40 1 3.7911 5.3501 -2.0002 41 1 3.3264 7.7084 0.4577 42 1 1.5576 6.3472 -0.5098 43 1 1.3127 4.5125 0.0000 44 1 0.2174 2.3120 -0.0010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_6672420.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:07 Heat of formation + Delta-G solvation = -118.305229 kcal Electronic energy + Delta-G solvation = -33173.913125 eV Core-core repulsion = 28447.295113 eV Total energy + Delta-G solvation = -4726.618012 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.129 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.80830 -42.43515 -40.77455 -40.13804 -39.13675 -39.06115 -37.12906 -36.59887 -35.02289 -34.07757 -33.69154 -31.93768 -31.02079 -28.61986 -27.26038 -26.95304 -26.25785 -24.90236 -24.03263 -23.01599 -22.01025 -21.76886 -20.61040 -19.94641 -19.30360 -19.07391 -18.59214 -18.45835 -17.91106 -17.79455 -17.71354 -17.05936 -16.85825 -16.57985 -16.25625 -16.24008 -16.17080 -15.87741 -15.75976 -15.37864 -14.88190 -14.72662 -14.59828 -14.56497 -14.24416 -13.89609 -13.63421 -13.51626 -13.42445 -13.37910 -13.26576 -12.75188 -12.47564 -12.26776 -12.13308 -12.06169 -11.70244 -11.67160 -11.46290 -11.06472 -11.03054 -10.89058 -10.62240 -10.51792 -9.87284 -9.02780 -4.89888 -0.72918 0.08235 0.55013 1.03487 1.22496 1.29518 1.58798 1.66061 1.73565 1.98193 2.12641 2.22192 2.37713 3.00702 3.10589 3.14895 3.34720 3.39678 3.52983 3.53313 3.64339 3.69888 3.79397 3.85172 3.95130 4.09407 4.15212 4.33149 4.42727 4.43612 4.48127 4.49221 4.54990 4.69831 4.70317 4.78029 4.78481 4.80615 4.85054 5.03246 5.08106 5.20113 5.30572 5.53316 5.65729 6.02898 6.14326 6.25361 6.49041 6.64465 6.82171 7.03508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.331 6.331 3 C 0.139 3.861 4 C 0.026 3.974 5 O -0.175 6.175 6 C -0.032 4.032 7 C 0.605 3.395 8 O -0.528 6.528 9 N -0.689 5.689 10 C 0.128 3.872 11 C 0.535 3.465 12 N -0.831 5.831 13 O -0.567 6.567 14 C -0.116 4.116 15 C 0.085 3.915 16 H 0.092 0.908 17 O -0.569 6.569 18 C -0.132 4.132 19 C -0.108 4.108 20 C -0.096 4.096 21 C -0.100 4.100 22 C -0.090 4.090 23 O -0.548 6.548 24 Si 0.781 3.219 25 C -0.089 4.089 26 C -0.165 4.165 27 H 0.077 0.923 28 H 0.072 0.928 29 H 0.116 0.884 30 H 0.428 0.572 31 H 0.411 0.589 32 H 0.413 0.587 33 H 0.065 0.935 34 H 0.099 0.901 35 H 0.400 0.600 36 H 0.130 0.870 37 H 0.105 0.895 38 H 0.169 0.831 39 H 0.115 0.885 40 H 0.386 0.614 41 H -0.307 1.307 42 H -0.262 1.262 43 H 0.164 0.836 44 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.667 -3.022 3.303 13.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.245 6.245 3 C 0.093 3.907 4 C -0.022 4.022 5 O -0.077 6.077 6 C -0.082 4.082 7 C 0.391 3.609 8 O -0.405 6.405 9 N -0.344 5.344 10 C 0.038 3.962 11 C 0.318 3.682 12 N -0.394 5.394 13 O -0.445 6.445 14 C -0.155 4.155 15 C 0.025 3.975 16 H 0.109 0.891 17 O -0.378 6.378 18 C -0.170 4.170 19 C -0.129 4.129 20 C -0.098 4.098 21 C -0.100 4.100 22 C -0.197 4.197 23 O -0.357 6.357 24 Si 0.685 3.315 25 C -0.106 4.106 26 C -0.184 4.184 27 H 0.096 0.904 28 H 0.091 0.909 29 H 0.134 0.866 30 H 0.268 0.732 31 H 0.241 0.759 32 H 0.245 0.755 33 H 0.083 0.917 34 H 0.117 0.883 35 H 0.251 0.749 36 H 0.148 0.852 37 H 0.123 0.877 38 H 0.187 0.813 39 H 0.133 0.867 40 H 0.236 0.764 41 H -0.235 1.235 42 H -0.188 1.188 43 H 0.181 0.819 44 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -11.110 -1.903 3.085 11.686 hybrid contribution -0.077 -0.461 -0.727 0.864 sum -11.187 -2.365 2.358 11.674 Atomic orbital electron populations 1.23488 0.75335 1.06042 1.03132 1.86144 1.24257 1.25704 1.88387 1.17950 0.86101 0.86818 0.99816 1.19142 0.88155 0.86981 1.07902 1.84010 1.12420 1.34755 1.76498 1.21666 0.83807 0.92424 1.10291 1.16756 0.85297 0.82444 0.76434 1.90967 1.31435 1.68062 1.50072 1.45678 1.09971 1.04908 1.73818 1.21562 0.85074 0.96848 0.92740 1.20145 0.86610 0.75226 0.86226 1.43629 1.13818 1.71738 1.10213 1.90768 1.15277 1.52523 1.85883 1.23255 0.98683 0.96922 0.96675 1.23102 0.96358 0.92366 0.85664 0.89056 1.86486 1.94040 1.28748 1.28528 1.23940 1.00344 0.90335 1.02363 1.22857 0.95441 0.94470 1.00095 1.19541 0.92226 0.92855 1.05137 1.19532 0.93474 0.93850 1.03180 1.25374 1.07692 0.98740 0.87917 1.86614 1.38969 1.92798 1.17285 0.93928 0.75399 0.73481 0.88683 1.20880 0.92917 0.98863 0.97951 1.21378 1.01838 0.89617 1.05522 0.90441 0.90946 0.86599 0.73228 0.75882 0.75499 0.91651 0.88263 0.74889 0.85157 0.87681 0.81308 0.86705 0.76431 1.23545 1.18816 0.81888 0.80354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.12 9.81 113.37 1.11 0.99 16 2 O -0.33 0.09 10.50 -93.12 -0.98 -0.89 16 3 C 0.14 0.05 6.70 22.57 0.15 0.21 16 4 C 0.03 0.11 7.35 23.14 0.17 0.28 16 5 O -0.17 -0.74 10.29 -13.44 -0.14 -0.88 16 6 C -0.03 -0.16 7.07 24.00 0.17 0.01 16 7 C 0.60 3.36 7.19 86.54 0.62 3.99 16 8 O -0.53 -6.88 15.87 -4.18 -0.07 -6.94 16 9 N -0.69 0.42 4.43 -427.56 -1.90 -1.47 16 10 C 0.13 0.26 1.11 3.38 0.00 0.26 16 11 C 0.54 3.25 6.68 87.66 0.59 3.83 16 12 N -0.83 0.43 8.77 -173.54 -1.52 -1.10 16 13 O -0.57 -8.02 16.07 -3.03 -0.05 -8.07 16 14 C -0.12 -0.80 6.16 31.12 0.19 -0.61 16 15 C 0.08 0.22 4.80 31.12 0.15 0.37 16 16 H 0.09 0.40 7.32 -2.39 -0.02 0.39 16 17 O -0.57 -1.26 13.67 -148.98 -2.04 -3.29 16 18 C -0.13 0.45 7.21 31.12 0.22 0.68 16 19 C -0.11 -0.63 10.68 23.79 0.25 -0.37 16 20 C -0.10 -0.38 6.16 -20.24 -0.12 -0.50 16 21 C -0.10 0.04 5.26 -19.87 -0.10 -0.06 16 22 C -0.09 0.07 2.70 71.24 0.19 0.27 16 23 O -0.55 -1.62 12.88 -148.98 -1.92 -3.54 16 24 Si 0.78 -3.56 30.25 68.60 2.08 -1.49 16 25 C -0.09 0.43 8.62 22.02 0.19 0.62 16 26 C -0.17 0.84 9.03 22.40 0.20 1.04 16 27 H 0.08 -0.94 7.66 -2.39 -0.02 -0.96 16 28 H 0.07 -0.83 7.66 -2.39 -0.02 -0.84 16 29 H 0.12 -1.31 8.14 -2.38 -0.02 -1.33 16 30 H 0.43 -2.54 8.43 -92.71 -0.78 -3.32 16 31 H 0.41 -1.89 7.88 -92.71 -0.73 -2.62 16 32 H 0.41 -0.98 8.93 -92.71 -0.83 -1.81 16 33 H 0.06 0.83 7.85 -2.38 -0.02 0.81 16 34 H 0.10 0.71 8.14 -2.39 -0.02 0.69 16 35 H 0.40 -2.78 9.12 -74.06 -0.68 -3.45 16 36 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 37 H 0.10 -0.68 8.10 -2.39 -0.02 -0.70 16 38 H 0.17 1.02 8.06 -2.91 -0.02 0.99 16 39 H 0.12 -0.09 7.96 -2.39 -0.02 -0.11 16 40 H 0.39 -1.34 8.70 -74.06 -0.64 -1.98 16 41 H -0.31 -1.32 7.11 99.48 0.71 -0.61 16 42 H -0.26 0.98 6.69 99.48 0.67 1.64 16 43 H 0.16 -1.57 4.81 -2.91 -0.01 -1.59 16 44 H 0.18 -2.11 6.26 -2.91 -0.02 -2.13 16 Total: 0.00 -29.46 376.23 -5.05 -34.51 By element: Atomic # 1 Polarization: -15.31 SS G_CDS: -2.51 Total: -17.83 kcal Atomic # 6 Polarization: 6.99 SS G_CDS: 3.99 Total: 10.98 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -3.42 Total: -2.57 kcal Atomic # 8 Polarization: -18.42 SS G_CDS: -5.19 Total: -23.61 kcal Atomic # 14 Polarization: -3.56 SS G_CDS: 2.08 Total: -1.49 kcal Total: -29.46 -5.05 -34.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6672420.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.798 kcal (2) G-P(sol) polarization free energy of solvation -29.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds