Wall clock time and date at job start Sat Mar 6 2021 22:42:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33817 * 122.44788 * 2 1 4 4 C 1.50703 * 124.52036 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47229 * 30.00142 * 4 3 2 6 6 Si 1.86304 * 109.46920 * 150.00369 * 4 3 2 7 7 S 1.70612 * 110.95359 * 179.78257 * 3 2 1 8 8 C 1.75837 * 91.56296 * 0.30401 * 7 3 2 9 9 C 1.46585 * 125.45832 * 179.97438 * 8 7 3 10 10 O 1.21699 * 120.00062 * 179.69259 * 9 8 7 11 11 N 1.34772 * 119.99860 * 359.69623 * 9 8 7 12 12 C 1.46497 * 119.99998 * 184.98904 * 11 9 8 13 13 C 1.50699 * 112.84767 * 305.62260 * 12 11 9 14 14 N 1.34778 * 120.00228 * 325.44823 * 13 12 11 15 15 O 1.21282 * 120.00183 * 145.45283 * 13 12 11 16 16 C 1.53785 * 113.61685 * 174.43059 * 12 11 9 17 17 C 1.53787 * 87.07935 * 270.88008 * 16 12 11 18 18 H 1.08995 * 113.61407 * 220.01672 * 17 16 12 19 19 O 1.42901 * 113.61278 * 89.11048 * 17 16 12 20 20 C 1.53777 * 113.61861 * 76.92862 * 12 11 9 21 21 C 1.36652 * 109.08269 * 359.69969 * 8 7 3 22 22 H 1.09002 * 109.47139 * 270.00243 * 1 2 3 23 23 H 1.09000 * 109.47630 * 30.00261 * 1 2 3 24 24 H 1.08998 * 109.47153 * 150.00290 * 1 2 3 25 25 H 1.09005 * 109.46791 * 270.00023 * 4 3 2 26 26 H 0.96690 * 114.00269 * 60.00386 * 5 4 3 27 27 H 1.48498 * 109.99795 * 179.97438 * 6 4 3 28 28 H 1.48494 * 109.99708 * 301.31542 * 6 4 3 29 29 H 0.97004 * 120.00340 * 5.26096 * 11 9 8 30 30 H 0.97005 * 119.99625 * 355.04810 * 14 13 12 31 31 H 0.96996 * 119.99944 * 175.03798 * 14 13 12 32 32 H 1.09000 * 113.61615 * 25.42841 * 16 12 11 33 33 H 1.09000 * 113.61830 * 156.25481 * 16 12 11 34 34 H 0.96701 * 113.99926 * 179.97438 * 19 17 16 35 35 H 1.09001 * 113.61701 * 203.66620 * 20 12 11 36 36 H 1.09004 * 113.61221 * 334.57084 * 20 12 11 37 37 H 1.07996 * 123.34689 * 180.24858 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6354 2.5162 0.0006 5 8 0.3756 2.4979 0.6747 6 14 2.7928 3.6826 0.8786 7 16 3.8969 0.7893 0.0060 8 6 3.5937 -0.9427 -0.0007 9 6 4.6231 -1.9863 -0.0002 10 8 4.3002 -3.1596 0.0004 11 7 5.9272 -1.6463 -0.0003 12 6 6.9549 -2.6845 -0.1101 13 6 6.8139 -3.7603 0.9358 14 7 6.3729 -3.4465 2.1702 15 8 7.0973 -4.9085 0.6668 16 6 8.3831 -2.1274 -0.2319 17 6 8.1622 -2.1103 -1.7538 18 1 9.0351 -2.4258 -2.3252 19 8 7.5924 -0.8917 -2.2358 20 6 7.1300 -3.2296 -1.5373 21 6 2.2445 -1.1601 -0.0004 22 1 -0.3633 0.0000 1.0277 23 1 -0.3634 0.8899 -0.5139 24 1 -0.3633 -0.8900 -0.5138 25 1 1.4929 2.8507 -1.0270 26 1 0.4267 2.2093 1.5961 27 1 2.2230 5.0539 0.8854 28 1 3.0204 3.2197 2.2710 29 1 6.1856 -0.7144 0.0763 30 1 6.2148 -2.5194 2.4075 31 1 6.2135 -4.1478 2.8210 32 1 8.5033 -1.1352 0.2030 33 1 9.1539 -2.8272 0.0908 34 1 7.4514 -0.8748 -3.1923 35 1 7.5583 -4.2313 -1.5727 36 1 6.2386 -3.1271 -2.1562 37 1 1.8019 -2.1452 -0.0001 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_6739946.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:10 Heat of formation + Delta-G solvation = -83.888292 kcal Electronic energy + Delta-G solvation = -24504.359841 eV Core-core repulsion = 20762.203170 eV Total energy + Delta-G solvation = -3742.156670 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.23587 -40.41157 -39.55492 -39.11815 -37.48719 -36.14559 -34.65503 -33.89553 -32.04623 -30.30485 -27.54918 -27.10240 -25.97556 -24.48994 -22.48208 -21.88145 -20.52290 -20.12983 -19.52992 -18.98052 -18.23073 -17.86030 -17.60597 -17.38755 -16.70389 -16.56399 -16.12523 -15.90437 -15.56922 -15.49629 -15.31822 -14.75461 -14.62015 -14.43725 -13.98968 -13.89191 -13.66854 -13.54488 -13.17971 -13.15386 -13.00001 -12.56314 -12.40274 -12.27466 -11.89000 -11.85021 -11.29743 -11.15563 -10.97312 -10.92998 -10.57028 -10.12211 -9.71760 -9.45045 -5.25211 -0.66282 0.26190 0.67491 0.99907 1.28946 1.43222 1.51950 1.77503 1.86749 2.10544 2.55475 2.83139 3.07657 3.24647 3.40262 3.48021 3.58489 3.67564 3.88941 4.07129 4.22655 4.23667 4.39618 4.47097 4.50275 4.53928 4.69584 4.73617 4.76454 4.81993 4.94584 4.99182 5.25645 5.34511 5.40293 5.85934 6.14676 6.23867 6.39425 6.51159 7.01970 7.32550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.096 4.096 3 C -0.236 4.236 4 C -0.033 4.033 5 O -0.517 6.517 6 Si 0.663 3.337 7 S 0.211 5.789 8 C -0.263 4.263 9 C 0.592 3.408 10 O -0.511 6.511 11 N -0.699 5.699 12 C 0.132 3.868 13 C 0.539 3.461 14 N -0.847 5.847 15 O -0.532 6.532 16 C -0.120 4.120 17 C 0.083 3.917 18 H 0.082 0.918 19 O -0.549 6.549 20 C -0.155 4.155 21 C -0.046 4.046 22 H 0.069 0.931 23 H 0.084 0.916 24 H 0.063 0.937 25 H 0.129 0.871 26 H 0.378 0.622 27 H -0.237 1.237 28 H -0.247 1.247 29 H 0.407 0.593 30 H 0.398 0.602 31 H 0.403 0.597 32 H 0.094 0.906 33 H 0.118 0.882 34 H 0.387 0.613 35 H 0.115 0.885 36 H 0.084 0.916 37 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.820 6.158 -0.265 6.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.109 4.109 3 C -0.356 4.356 4 C -0.144 4.144 5 O -0.324 6.324 6 Si 0.560 3.440 7 S 0.479 5.521 8 C -0.383 4.383 9 C 0.378 3.622 10 O -0.387 6.387 11 N -0.354 5.354 12 C 0.042 3.958 13 C 0.322 3.678 14 N -0.409 5.409 15 O -0.407 6.407 16 C -0.158 4.158 17 C 0.023 3.977 18 H 0.100 0.900 19 O -0.355 6.355 20 C -0.194 4.194 21 C -0.080 4.080 22 H 0.087 0.913 23 H 0.103 0.897 24 H 0.082 0.918 25 H 0.147 0.853 26 H 0.227 0.773 27 H -0.161 1.161 28 H -0.171 1.171 29 H 0.244 0.756 30 H 0.226 0.774 31 H 0.234 0.766 32 H 0.112 0.888 33 H 0.136 0.864 34 H 0.235 0.765 35 H 0.133 0.867 36 H 0.102 0.898 37 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.078 6.444 0.110 7.627 hybrid contribution -2.335 -0.903 0.559 2.565 sum 1.743 5.540 0.669 5.846 Atomic orbital electron populations 1.20638 0.88713 1.03447 1.02655 1.18698 0.98392 0.90609 1.03198 1.24467 0.98921 1.00712 1.11493 1.24438 0.91223 0.95204 1.03567 1.86641 1.27540 1.89194 1.29031 0.95480 0.84953 0.80059 0.83460 1.82750 1.02533 0.98193 1.68602 1.24506 0.97703 0.96966 1.19090 1.16997 0.81375 0.87607 0.76177 1.90920 1.81275 1.17986 1.48513 1.45457 1.04236 1.09854 1.75857 1.21444 0.89912 0.88443 0.96001 1.20162 0.75616 0.89132 0.82884 1.43723 1.70007 1.12501 1.14692 1.90755 1.49521 1.20335 1.80130 1.23342 0.93447 1.03119 0.95842 1.22646 0.95274 0.84851 0.94911 0.90015 1.86379 1.84881 1.35692 1.28564 1.23980 1.01141 1.00675 0.93602 1.20709 0.90895 1.00094 0.96255 0.91254 0.89686 0.91808 0.85338 0.77339 1.16061 1.17055 0.75597 0.77429 0.76572 0.88782 0.86398 0.76460 0.86700 0.89767 0.82857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.06 8.67 36.01 0.31 0.38 16 2 C -0.10 -0.01 5.75 -106.45 -0.61 -0.62 16 3 C -0.24 0.23 5.54 -35.86 -0.20 0.03 16 4 C -0.03 0.06 2.76 36.01 0.10 0.16 16 5 O -0.52 0.48 9.85 -35.23 -0.35 0.13 16 6 Si 0.66 -1.49 31.31 -169.99 -5.32 -6.82 16 7 S 0.21 -0.42 19.79 -107.50 -2.13 -2.55 16 8 C -0.26 -0.20 6.45 -36.79 -0.24 -0.43 16 9 C 0.59 1.25 7.36 -12.90 -0.09 1.15 16 10 O -0.51 -3.10 15.63 5.19 0.08 -3.02 16 11 N -0.70 0.36 4.20 -49.25 -0.21 0.16 16 12 C 0.13 0.06 1.01 -132.16 -0.13 -0.07 16 13 C 0.54 1.73 5.82 -10.99 -0.06 1.67 16 14 N -0.85 -0.34 8.54 31.22 0.27 -0.07 16 15 O -0.53 -3.87 16.76 5.56 0.09 -3.78 16 16 C -0.12 0.25 7.16 -25.91 -0.19 0.07 16 17 C 0.08 -0.17 5.28 -25.91 -0.14 -0.31 16 18 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 19 O -0.55 1.34 13.07 -35.23 -0.46 0.88 16 20 C -0.15 -0.10 7.07 -25.92 -0.18 -0.29 16 21 C -0.05 -0.05 9.80 -40.44 -0.40 -0.45 16 22 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 23 H 0.08 -0.01 6.42 -51.93 -0.33 -0.34 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 25 H 0.13 -0.33 7.96 -51.93 -0.41 -0.74 16 26 H 0.38 -1.24 8.66 45.56 0.39 -0.85 16 27 H -0.24 -0.15 7.11 56.52 0.40 0.26 16 28 H -0.25 0.04 7.11 56.52 0.40 0.44 16 29 H 0.41 -1.02 7.74 -40.82 -0.32 -1.33 16 30 H 0.40 -0.78 8.43 -40.82 -0.34 -1.12 16 31 H 0.40 -0.02 8.93 -40.82 -0.36 -0.39 16 32 H 0.09 -0.32 8.10 -51.93 -0.42 -0.74 16 33 H 0.12 -0.30 8.09 -51.93 -0.42 -0.72 16 34 H 0.39 -2.12 9.12 45.56 0.42 -1.71 16 35 H 0.11 0.20 7.35 -51.93 -0.38 -0.19 16 36 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.15 0.22 8.06 -52.49 -0.42 -0.20 16 LS Contribution 327.46 15.07 4.93 4.93 Total: 0.00 -10.02 327.46 -8.41 -18.44 By element: Atomic # 1 Polarization: -6.10 SS G_CDS: -3.49 Total: -9.59 kcal Atomic # 6 Polarization: 3.11 SS G_CDS: -1.83 Total: 1.28 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: 0.06 Total: 0.09 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -0.63 Total: -5.78 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.32 Total: -6.82 kcal Atomic # 16 Polarization: -0.42 SS G_CDS: -2.13 Total: -2.55 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -10.02 -8.41 -18.44 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6739946.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.451 kcal (2) G-P(sol) polarization free energy of solvation -10.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.476 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.413 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.437 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.888 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds