Wall clock time and date at job start Sat Mar 6 2021 22:42:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21279 * 119.99644 * 2 1 4 4 C 1.50699 * 120.00099 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.84874 * 325.55761 * 4 2 1 6 6 C 1.34777 * 119.99841 * 298.38677 * 5 4 2 7 7 O 1.21636 * 120.00235 * 354.99155 * 6 5 4 8 8 C 1.47191 * 119.99376 * 174.99558 * 6 5 4 9 9 C 1.36007 * 123.46797 * 359.97143 * 8 6 5 10 10 S 1.70442 * 110.81905 * 180.02562 * 9 8 6 11 11 C 1.75502 * 92.44557 * 0.02562 * 10 9 8 12 12 C 1.50704 * 124.71215 * 180.02562 * 11 10 9 13 13 O 1.42897 * 109.46993 * 245.02059 * 12 11 10 14 14 Si 1.86304 * 109.47186 * 5.01949 * 12 11 10 15 15 C 1.32767 * 110.57664 * 0.25940 * 11 10 9 16 16 C 1.53774 * 113.61650 * 194.35959 * 4 2 1 17 17 C 1.54046 * 86.98802 * 219.98080 * 16 4 2 18 18 H 1.09001 * 113.62098 * 139.97259 * 17 16 4 19 19 O 1.42900 * 113.69062 * 270.87708 * 17 16 4 20 20 C 1.53780 * 113.61254 * 96.74965 * 4 2 1 21 21 H 0.97005 * 119.99851 * 175.08492 * 1 2 3 22 22 H 0.97000 * 120.00139 * 355.08679 * 1 2 3 23 23 H 0.96998 * 119.99900 * 118.38616 * 5 4 2 24 24 H 1.08003 * 124.58663 * 0.02562 * 9 8 6 25 25 H 1.08998 * 109.47438 * 125.02026 * 12 11 10 26 26 H 0.96705 * 113.99860 * 59.99895 * 13 12 11 27 27 H 1.48502 * 109.99739 * 58.67940 * 14 12 11 28 28 H 1.48491 * 110.00291 * 179.97438 * 14 12 11 29 29 H 1.08004 * 123.45909 * 179.73288 * 15 11 10 30 30 H 1.09002 * 113.61384 * 334.49078 * 16 4 2 31 31 H 1.09002 * 113.61551 * 105.38243 * 16 4 2 32 32 H 0.96709 * 113.99580 * 277.52743 * 19 17 16 33 33 H 1.08997 * 113.61938 * 254.61518 * 20 4 2 34 34 H 1.09002 * 113.61374 * 25.52124 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4215 -2.3541 0.7646 6 6 1.2022 -2.1918 2.0845 7 8 1.6480 -1.2172 2.6598 8 6 0.4233 -3.1940 2.8297 9 6 -0.1075 -4.3081 2.2580 10 16 -0.9442 -5.2416 3.4128 11 6 -0.5768 -4.1107 4.7037 12 6 -1.0163 -4.2713 6.1362 13 8 -1.9217 -3.2196 6.4773 14 14 -1.8676 -5.9154 6.3441 15 6 0.1380 -3.0917 4.2419 16 6 3.5914 -1.1559 0.3499 17 6 3.8691 -2.2058 -0.7426 18 1 4.7525 -1.9882 -1.3430 19 8 3.8402 -3.5524 -0.2655 20 6 2.5527 -1.7563 -1.3985 21 1 -0.4850 -0.8370 -0.0720 22 1 -0.4850 0.8369 0.0719 23 1 1.1293 -3.1655 0.3206 24 1 -0.0118 -4.5662 1.2137 25 1 -0.1457 -4.2276 6.7906 26 1 -2.7215 -3.1976 5.9341 27 1 -0.9467 -7.0159 5.9620 28 1 -2.3054 -6.0862 7.7527 29 1 0.4744 -2.2720 4.8595 30 1 3.9968 -0.1702 0.1216 31 1 3.8400 -1.4942 1.3559 32 1 4.6655 -3.8409 0.1481 33 1 1.9634 -2.5791 -1.8033 34 1 2.6748 -0.9345 -2.1041 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_6894386.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:12 Heat of formation + Delta-G solvation = -91.156703 kcal Electronic energy + Delta-G solvation = -22462.256072 eV Core-core repulsion = 18875.321839 eV Total energy + Delta-G solvation = -3586.934233 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.071 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.31633 -40.36350 -39.26310 -38.70318 -37.11618 -36.15818 -34.81422 -33.96339 -31.61306 -27.34052 -27.05671 -26.93330 -25.38768 -22.60421 -22.07911 -20.64184 -20.44848 -19.22434 -18.91272 -18.15390 -18.01501 -17.91792 -17.52363 -16.71738 -16.32155 -16.00507 -15.86153 -15.72654 -15.49757 -15.29598 -14.84915 -14.45472 -14.12702 -13.84805 -13.74848 -13.59182 -13.47907 -13.19615 -12.68403 -12.53271 -12.30460 -11.93852 -11.73117 -11.49645 -11.15549 -10.89663 -10.77590 -10.58969 -10.20729 -9.99458 -9.43511 -5.14501 -0.33923 0.39634 0.69750 0.79390 1.21440 1.33452 1.60611 1.87317 1.92201 2.16924 2.48028 2.97480 3.26673 3.38408 3.45169 3.64773 3.66337 3.79561 3.94873 4.00804 4.26760 4.34374 4.40308 4.58889 4.67219 4.70515 4.77256 4.83894 4.88365 5.00073 5.15373 5.27696 5.73417 6.26056 6.39361 6.68456 6.77784 7.07231 7.16868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.834 5.834 2 C 0.524 3.476 3 O -0.583 6.583 4 C 0.130 3.870 5 N -0.676 5.676 6 C 0.579 3.421 7 O -0.574 6.574 8 C -0.182 4.182 9 C -0.184 4.184 10 S 0.261 5.739 11 C -0.251 4.251 12 C -0.040 4.040 13 O -0.553 6.553 14 Si 0.745 3.255 15 C -0.077 4.077 16 C -0.164 4.164 17 C 0.095 3.905 18 H 0.097 0.903 19 O -0.555 6.555 20 C -0.106 4.106 21 H 0.414 0.586 22 H 0.406 0.594 23 H 0.422 0.578 24 H 0.208 0.792 25 H 0.111 0.889 26 H 0.397 0.603 27 H -0.255 1.255 28 H -0.275 1.275 29 H 0.126 0.874 30 H 0.094 0.906 31 H 0.062 0.938 32 H 0.398 0.602 33 H 0.118 0.882 34 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.009 -9.159 -6.279 12.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.397 5.397 2 C 0.308 3.692 3 O -0.462 6.462 4 C 0.039 3.961 5 N -0.332 5.332 6 C 0.367 3.633 7 O -0.454 6.454 8 C -0.199 4.199 9 C -0.322 4.322 10 S 0.528 5.472 11 C -0.367 4.367 12 C -0.151 4.151 13 O -0.362 6.362 14 Si 0.647 3.353 15 C -0.106 4.106 16 C -0.204 4.204 17 C 0.035 3.965 18 H 0.115 0.885 19 O -0.363 6.363 20 C -0.143 4.143 21 H 0.244 0.756 22 H 0.237 0.763 23 H 0.262 0.738 24 H 0.225 0.775 25 H 0.128 0.872 26 H 0.247 0.753 27 H -0.180 1.180 28 H -0.201 1.201 29 H 0.143 0.857 30 H 0.113 0.887 31 H 0.081 0.919 32 H 0.249 0.751 33 H 0.136 0.864 34 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -5.127 -9.898 -5.346 12.362 hybrid contribution 1.555 1.981 0.640 2.598 sum -3.572 -7.917 -4.706 9.878 Atomic orbital electron populations 1.43686 1.06457 1.13972 1.75544 1.20869 0.83533 0.90878 0.73935 1.90728 1.69357 1.34476 1.51618 1.21436 0.92497 0.85445 0.96723 1.45181 1.59568 1.20986 1.07416 1.17967 0.78747 0.84822 0.81786 1.90857 1.52192 1.33010 1.69349 1.19938 1.07613 0.98190 0.94207 1.26211 1.01386 0.97561 1.07072 1.82876 1.48506 1.21399 0.94463 1.24885 1.08832 1.01324 1.01701 1.24721 0.97007 1.03106 0.90301 1.86512 1.34800 1.52948 1.61895 0.94215 0.84291 0.72344 0.84486 1.20941 0.97563 0.98726 0.93386 1.23976 0.93483 1.01848 1.01058 1.22633 0.98811 0.81639 0.93389 0.88510 1.86334 1.43082 1.26665 1.80217 1.23337 0.96140 1.02896 0.91953 0.75557 0.76306 0.73773 0.77546 0.87184 0.75293 1.18043 1.20088 0.85653 0.88717 0.91904 0.75121 0.86391 0.86013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 -0.17 8.78 -173.53 -1.52 -1.70 16 2 C 0.52 3.96 6.47 87.66 0.57 4.53 16 3 O -0.58 -10.11 16.76 -3.03 -0.05 -10.16 16 4 C 0.13 0.21 0.95 3.38 0.00 0.21 16 5 N -0.68 1.28 4.13 -427.37 -1.76 -0.49 16 6 C 0.58 3.19 7.35 86.59 0.64 3.83 16 7 O -0.57 -9.39 15.52 -4.15 -0.06 -9.45 16 8 C -0.18 -0.22 5.98 -19.87 -0.12 -0.34 16 9 C -0.18 1.26 10.38 67.30 0.70 1.96 16 10 S 0.26 -1.91 20.20 -56.49 -1.14 -3.05 16 11 C -0.25 0.23 5.65 24.51 0.14 0.36 16 12 C -0.04 0.04 2.94 71.24 0.21 0.24 16 13 O -0.55 -0.37 12.88 -148.98 -1.92 -2.29 16 14 Si 0.75 -3.20 30.92 68.60 2.12 -1.08 16 15 C -0.08 -0.33 9.95 22.67 0.23 -0.10 16 16 C -0.16 -0.74 6.72 31.21 0.21 -0.53 16 17 C 0.09 -0.35 5.28 31.21 0.16 -0.18 16 18 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 19 O -0.56 2.63 13.09 -148.98 -1.95 0.68 16 20 C -0.11 0.54 7.18 31.12 0.22 0.76 16 21 H 0.41 -2.58 8.42 -92.70 -0.78 -3.36 16 22 H 0.41 -0.16 8.93 -92.71 -0.83 -0.98 16 23 H 0.42 -3.74 7.15 -92.71 -0.66 -4.41 16 24 H 0.21 -3.01 7.02 -2.91 -0.02 -3.03 16 25 H 0.11 0.12 7.96 -2.39 -0.02 0.10 16 26 H 0.40 -3.23 8.70 -74.05 -0.64 -3.87 16 27 H -0.26 0.33 7.11 99.48 0.71 1.03 16 28 H -0.28 -0.76 7.11 99.48 0.71 -0.05 16 29 H 0.13 1.19 8.06 -2.91 -0.02 1.16 16 30 H 0.09 0.75 7.34 -2.39 -0.02 0.74 16 31 H 0.06 0.57 7.57 -2.39 -0.02 0.56 16 32 H 0.40 -4.01 9.12 -74.05 -0.68 -4.68 16 33 H 0.12 -1.17 8.09 -2.39 -0.02 -1.19 16 34 H 0.12 -0.68 8.09 -2.39 -0.02 -0.70 16 Total: 0.00 -30.47 309.94 -5.67 -36.14 By element: Atomic # 1 Polarization: -17.01 SS G_CDS: -2.33 Total: -19.34 kcal Atomic # 6 Polarization: 7.79 SS G_CDS: 2.96 Total: 10.74 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -3.29 Total: -2.18 kcal Atomic # 8 Polarization: -17.24 SS G_CDS: -3.98 Total: -21.22 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.12 Total: -1.08 kcal Atomic # 16 Polarization: -1.91 SS G_CDS: -1.14 Total: -3.05 kcal Total: -30.47 -5.67 -36.14 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_6894386.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.021 kcal (2) G-P(sol) polarization free energy of solvation -30.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds