Wall clock time and date at job start Sat Mar 6 2021 22:42:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21282 * 120.00037 * 2 1 4 4 C 1.50701 * 120.00166 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.84856 * 323.90801 * 4 2 1 6 6 C 1.34784 * 119.99642 * 293.52864 * 5 4 2 7 7 O 1.21595 * 119.99939 * 354.99680 * 6 5 4 8 8 C 1.47518 * 119.99627 * 175.00023 * 6 5 4 9 9 C 1.36597 * 125.76875 * 180.02562 * 8 6 5 10 10 N 1.34817 * 106.84065 * 179.97438 * 9 8 6 11 11 C 1.46504 * 126.59396 * 179.97438 * 10 9 8 12 12 C 1.52999 * 109.46596 * 125.00047 * 11 10 9 13 13 O 1.42907 * 109.46736 * 179.97438 * 12 11 10 14 14 C 1.35925 * 117.00069 * 179.97438 * 13 12 11 15 15 C 1.38662 * 120.05953 * 0.02562 * 14 13 12 16 16 C 1.38189 * 119.95995 * 179.97438 * 15 14 13 17 17 C 1.38241 * 120.07538 * 0.02562 * 16 15 14 18 18 C 1.50698 * 119.94010 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.47367 * 300.00384 * 18 17 16 20 20 Si 1.86290 * 109.47061 * 180.02562 * 18 17 16 21 21 C 1.38285 * 120.11741 * 0.25591 * 17 16 15 22 22 C 1.38215 * 120.04179 * 359.44846 * 21 17 16 23 23 Cl 1.73601 * 120.03773 * 180.24903 * 22 21 17 24 24 N 1.40211 * 106.81076 * 0.23799 * 10 9 8 25 25 N 1.28763 * 108.36326 * 359.59122 * 24 10 9 26 26 C 1.53778 * 113.61799 * 192.70921 * 4 2 1 27 27 C 1.53786 * 87.08072 * 270.80108 * 26 4 2 28 28 H 1.08995 * 113.61685 * 89.11501 * 27 26 4 29 29 O 1.42895 * 113.61113 * 220.01751 * 27 26 4 30 30 C 1.53782 * 87.08120 * 334.56651 * 27 26 4 31 31 H 0.97000 * 119.99842 * 174.97463 * 1 2 3 32 32 H 0.96996 * 120.00108 * 354.98292 * 1 2 3 33 33 H 0.96997 * 120.00297 * 113.52862 * 5 4 2 34 34 H 1.08002 * 126.58153 * 359.97396 * 9 8 6 35 35 H 1.09000 * 109.47148 * 4.99931 * 11 10 9 36 36 H 1.08997 * 109.46960 * 244.99843 * 11 10 9 37 37 H 1.09000 * 109.47467 * 60.00079 * 12 11 10 38 38 H 1.08997 * 109.47299 * 299.99588 * 12 11 10 39 39 H 1.08008 * 120.02047 * 359.97438 * 15 14 13 40 40 H 1.08006 * 119.96406 * 180.02562 * 16 15 14 41 41 H 1.09004 * 109.47262 * 59.99663 * 18 17 16 42 42 H 0.96698 * 114.00551 * 179.97438 * 19 18 17 43 43 H 1.48499 * 109.99956 * 298.67953 * 20 18 17 44 44 H 1.48505 * 110.00405 * 60.00060 * 20 18 17 45 45 H 1.07994 * 119.97859 * 179.72629 * 21 17 16 46 46 H 1.09002 * 113.61372 * 25.35069 * 26 4 2 47 47 H 1.09001 * 113.61674 * 156.17028 * 26 4 2 48 48 H 0.96707 * 113.99910 * 179.97438 * 29 27 26 49 49 H 1.09000 * 113.61263 * 270.88591 * 30 27 26 50 50 H 1.08994 * 113.61585 * 139.98056 * 30 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4410 -2.3429 0.7964 6 6 1.3419 -2.2058 2.1335 7 8 1.8790 -1.2674 2.6899 8 6 0.5818 -3.1941 2.9220 9 6 0.4056 -3.1699 4.2763 10 7 -0.3447 -4.2447 4.5918 11 6 -0.7907 -4.6356 5.9314 12 6 -2.3134 -4.7852 5.9384 13 8 -2.7484 -5.1671 7.2450 14 6 -4.0844 -5.3426 7.4238 15 6 -4.9580 -5.1518 6.3640 16 6 -6.3157 -5.3314 6.5480 17 6 -6.8041 -5.7004 7.7875 18 6 -8.2854 -5.8948 7.9848 19 8 -8.9691 -4.6744 7.6929 20 14 -8.6174 -6.3848 9.7512 21 6 -5.9363 -5.8859 8.8480 22 6 -4.5768 -5.7136 8.6680 23 17 -3.4868 -5.9527 9.9979 24 7 -0.6109 -4.9197 3.3920 25 7 -0.0549 -4.2703 2.4292 26 6 3.5996 -1.1512 0.3105 27 6 3.8134 -0.9696 -1.2016 28 1 3.7367 0.0662 -1.5321 29 8 4.9813 -1.6267 -1.6975 30 6 2.5202 -1.7773 -1.4017 31 1 -0.4850 -0.8368 -0.0736 32 1 -0.4850 0.8368 0.0735 33 1 1.0751 -3.1286 0.3610 34 1 0.7930 -2.4316 4.9627 35 1 -0.4974 -3.8701 6.6498 36 1 -0.3311 -5.5854 6.2046 37 1 -2.6066 -5.5507 5.2200 38 1 -2.7730 -3.8353 5.6652 39 1 -4.5774 -4.8631 5.3953 40 1 -6.9962 -5.1832 5.7224 41 1 -8.6411 -6.6792 7.3167 42 1 -9.9289 -4.7262 7.7987 43 1 -7.9379 -7.6689 10.0584 44 1 -8.1372 -5.3231 10.6718 45 1 -6.3206 -6.1699 9.8165 46 1 3.8356 -0.2618 0.8948 47 1 4.0576 -2.0552 0.7120 48 1 5.1209 -1.5164 -2.6481 49 1 2.6833 -2.8529 -1.4696 50 1 1.8846 -1.3934 -2.1997 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_7143556.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:15 Heat of formation + Delta-G solvation = -33.172966 kcal Electronic energy + Delta-G solvation = -39101.307250 eV Core-core repulsion = 33546.146519 eV Total energy + Delta-G solvation = -5555.160731 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.123 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.43502 -42.27363 -41.62145 -40.02853 -39.47713 -38.99978 -37.86427 -37.19495 -36.49338 -36.19815 -34.88753 -33.96522 -32.62637 -32.32904 -31.97946 -30.68172 -27.18693 -26.93965 -26.62269 -25.81197 -24.72865 -24.10701 -22.95713 -22.87999 -22.41246 -21.52659 -20.46768 -19.92706 -19.35185 -18.99489 -18.43188 -18.37987 -17.89531 -17.73720 -17.55242 -17.45935 -17.11626 -17.00436 -16.82504 -16.35177 -16.05166 -15.99486 -15.80131 -15.70441 -15.59519 -15.32758 -15.08056 -14.97878 -14.71839 -14.66144 -14.23107 -14.01381 -13.90848 -13.80864 -13.57670 -13.53433 -13.32094 -13.24773 -12.75510 -12.65505 -12.59970 -12.49236 -12.42519 -12.18577 -12.08768 -11.88477 -11.84958 -11.57985 -11.54409 -11.28232 -11.00435 -10.80968 -10.57976 -10.35909 -10.27243 -10.21270 -9.43524 -4.99763 -0.17936 -0.09323 -0.04378 0.45011 0.63455 0.90182 1.24460 1.26466 1.59584 1.79218 1.88600 1.93659 2.01670 2.23781 2.31571 2.98683 3.10183 3.12211 3.22828 3.25023 3.38731 3.44870 3.55874 3.58844 3.61176 3.67281 3.74971 3.79598 3.82817 3.91087 3.93778 4.00140 4.12893 4.14884 4.28545 4.37249 4.39825 4.54315 4.55420 4.61336 4.62805 4.65049 4.76689 4.85064 4.88836 4.90875 5.15387 5.16883 5.18469 5.30225 5.71064 5.89946 6.15147 6.26624 6.72785 6.83960 6.89388 6.94213 7.12029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.535 3.465 3 O -0.570 6.570 4 C 0.130 3.870 5 N -0.689 5.689 6 C 0.609 3.391 7 O -0.552 6.552 8 C -0.120 4.120 9 C 0.118 3.882 10 N -0.350 5.350 11 C 0.123 3.877 12 C 0.046 3.954 13 O -0.305 6.305 14 C 0.139 3.861 15 C -0.188 4.188 16 C -0.043 4.043 17 C -0.111 4.111 18 C -0.065 4.065 19 O -0.562 6.562 20 Si 0.757 3.243 21 C -0.095 4.095 22 C -0.079 4.079 23 Cl -0.059 7.059 24 N -0.078 5.078 25 N -0.207 5.207 26 C -0.114 4.114 27 C 0.082 3.918 28 H 0.089 0.911 29 O -0.570 6.570 30 C -0.135 4.135 31 H 0.414 0.586 32 H 0.410 0.590 33 H 0.426 0.574 34 H 0.234 0.766 35 H 0.148 0.852 36 H 0.124 0.876 37 H 0.085 0.915 38 H 0.084 0.916 39 H 0.164 0.836 40 H 0.159 0.841 41 H 0.105 0.895 42 H 0.406 0.594 43 H -0.288 1.288 44 H -0.299 1.299 45 H 0.127 0.873 46 H 0.065 0.935 47 H 0.097 0.903 48 H 0.399 0.601 49 H 0.128 0.872 50 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.079 -4.448 -3.031 10.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.317 3.683 3 O -0.448 6.448 4 C 0.040 3.960 5 N -0.344 5.344 6 C 0.394 3.606 7 O -0.428 6.428 8 C -0.259 4.259 9 C -0.039 4.039 10 N -0.135 5.135 11 C 0.003 3.997 12 C -0.030 4.030 13 O -0.217 6.217 14 C 0.093 3.907 15 C -0.207 4.207 16 C -0.061 4.061 17 C -0.112 4.112 18 C -0.176 4.176 19 O -0.372 6.372 20 Si 0.664 3.336 21 C -0.113 4.113 22 C -0.106 4.106 23 Cl -0.030 7.030 24 N -0.058 5.058 25 N -0.081 5.081 26 C -0.153 4.153 27 C 0.023 3.977 28 H 0.106 0.894 29 O -0.378 6.378 30 C -0.173 4.173 31 H 0.245 0.755 32 H 0.242 0.758 33 H 0.265 0.735 34 H 0.250 0.750 35 H 0.165 0.835 36 H 0.142 0.858 37 H 0.103 0.897 38 H 0.102 0.898 39 H 0.181 0.819 40 H 0.176 0.824 41 H 0.123 0.877 42 H 0.257 0.743 43 H -0.215 1.215 44 H -0.227 1.227 45 H 0.145 0.855 46 H 0.083 0.917 47 H 0.116 0.884 48 H 0.250 0.750 49 H 0.146 0.854 50 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -7.649 -4.615 -1.694 9.092 hybrid contribution 0.348 0.651 -0.087 0.744 sum -7.300 -3.963 -1.781 8.496 Atomic orbital electron populations 1.43612 1.06066 1.14270 1.75373 1.20223 0.83603 0.89868 0.74585 1.90764 1.69187 1.33908 1.50934 1.21436 0.92219 0.86526 0.95819 1.45511 1.59478 1.23687 1.05685 1.16953 0.78485 0.83091 0.82056 1.90896 1.47410 1.33296 1.71228 1.21269 1.11445 1.00278 0.92950 1.23884 0.92062 0.90965 0.96971 1.50307 1.35690 1.17921 1.09582 1.21900 0.93651 1.06964 0.77186 1.23017 0.94491 1.02435 0.83094 1.85997 1.19369 1.83558 1.32787 1.18596 0.83422 0.96304 0.92418 1.21569 0.93760 1.06280 0.99073 1.21201 0.94786 0.93068 0.97075 1.19560 0.94904 1.03169 0.93560 1.24568 0.89118 0.91285 1.12648 1.86423 1.25989 1.32426 1.92351 0.94477 0.89362 0.76018 0.73704 1.20732 0.91094 1.00457 0.99066 1.20140 0.91055 1.10744 0.88653 1.98380 1.63573 1.95513 1.45533 1.82015 1.21518 1.17213 0.85077 1.74614 1.05941 1.03561 1.23984 1.23213 0.92139 1.03345 0.96623 1.23104 0.84736 0.95774 0.94122 0.89371 1.86492 1.44782 1.75978 1.30548 1.23952 0.97252 1.03861 0.92227 0.75481 0.75755 0.73467 0.75014 0.83460 0.85836 0.89654 0.89812 0.81900 0.82373 0.87720 0.74262 1.21499 1.22654 0.85519 0.91666 0.88449 0.74998 0.85370 0.87675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.04 8.78 -173.53 -1.52 0.51 16 2 C 0.53 2.65 6.61 87.66 0.58 3.23 16 3 O -0.57 -7.95 16.21 -3.03 -0.05 -8.00 16 4 C 0.13 0.14 1.05 3.38 0.00 0.14 16 5 N -0.69 1.17 4.79 -427.04 -2.04 -0.88 16 6 C 0.61 1.78 7.47 86.69 0.65 2.43 16 7 O -0.55 -5.52 15.90 -4.01 -0.06 -5.58 16 8 C -0.12 -0.02 6.99 40.82 0.29 0.27 16 9 C 0.12 -0.51 11.27 83.85 0.95 0.44 16 10 N -0.35 1.71 3.69 -347.09 -1.28 0.43 16 11 C 0.12 -1.18 6.91 86.38 0.60 -0.58 16 12 C 0.05 -0.31 4.95 71.98 0.36 0.04 16 13 O -0.30 0.30 9.60 -92.71 -0.89 -0.59 16 14 C 0.14 0.27 6.68 22.52 0.15 0.42 16 15 C -0.19 0.29 9.04 22.36 0.20 0.49 16 16 C -0.04 0.04 9.60 22.26 0.21 0.25 16 17 C -0.11 -0.19 5.42 -19.85 -0.11 -0.30 16 18 C -0.07 0.23 2.81 71.24 0.20 0.43 16 19 O -0.56 2.07 12.74 -148.98 -1.90 0.17 16 20 Si 0.76 -2.18 29.78 68.60 2.04 -0.14 16 21 C -0.10 -0.48 8.45 22.28 0.19 -0.29 16 22 C -0.08 -0.42 6.33 22.41 0.14 -0.28 16 23 Cl -0.06 -0.35 28.51 -2.72 -0.08 -0.43 16 24 N -0.08 -0.05 13.65 37.02 0.51 0.45 16 25 N -0.21 -0.24 12.04 -50.00 -0.60 -0.84 16 26 C -0.11 -0.70 6.14 31.12 0.19 -0.50 16 27 C 0.08 0.15 4.82 31.12 0.15 0.30 16 28 H 0.09 0.30 7.63 -2.39 -0.02 0.28 16 29 O -0.57 -0.99 13.67 -148.98 -2.04 -3.02 16 30 C -0.13 0.57 7.21 31.12 0.22 0.80 16 31 H 0.41 -3.19 8.47 -92.71 -0.79 -3.98 16 32 H 0.41 -1.50 8.93 -92.71 -0.83 -2.33 16 33 H 0.43 -2.62 8.40 -92.71 -0.78 -3.40 16 34 H 0.23 -2.29 8.06 -2.91 -0.02 -2.32 16 35 H 0.15 -2.10 8.08 -2.39 -0.02 -2.12 16 36 H 0.12 -1.27 8.14 -2.39 -0.02 -1.29 16 37 H 0.09 -0.56 7.66 -2.39 -0.02 -0.57 16 38 H 0.08 -0.69 7.66 -2.39 -0.02 -0.71 16 39 H 0.16 -1.07 6.30 -2.91 -0.02 -1.09 16 40 H 0.16 -0.78 8.06 -2.91 -0.02 -0.81 16 41 H 0.11 -0.88 7.96 -2.39 -0.02 -0.90 16 42 H 0.41 -5.62 8.74 -74.06 -0.65 -6.27 16 43 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 44 H -0.30 -1.63 7.11 99.48 0.71 -0.92 16 45 H 0.13 0.69 4.87 -2.91 -0.01 0.68 16 46 H 0.06 0.80 7.63 -2.39 -0.02 0.78 16 47 H 0.10 0.63 8.14 -2.39 -0.02 0.61 16 48 H 0.40 -2.91 9.12 -74.05 -0.68 -3.58 16 49 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 50 H 0.10 -0.81 8.10 -2.39 -0.02 -0.83 16 Total: 0.00 -34.94 445.45 -5.52 -40.46 By element: Atomic # 1 Polarization: -27.25 SS G_CDS: -2.57 Total: -29.82 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: 4.97 Total: 7.28 kcal Atomic # 7 Polarization: 4.62 SS G_CDS: -4.95 Total: -0.33 kcal Atomic # 8 Polarization: -12.09 SS G_CDS: -4.94 Total: -17.02 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: 2.04 Total: -0.14 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -0.08 Total: -0.43 kcal Total: -34.94 -5.52 -40.46 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_7143556.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.289 kcal (2) G-P(sol) polarization free energy of solvation -34.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.518 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.173 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds