Wall clock time and date at job start Sat Mar 6 2021 22:42:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37934 * 120.06931 * 2 1 4 4 C 1.38380 * 120.14166 * 180.02562 * 3 2 1 5 5 C 1.50706 * 119.85691 * 180.02562 * 4 3 2 6 6 C 1.38341 * 120.29428 * 359.97438 * 4 3 2 7 7 C 1.50700 * 119.92827 * 180.27301 * 6 4 3 8 8 O 1.42895 * 109.47400 * 284.72954 * 7 6 4 9 9 Si 1.86302 * 109.47103 * 164.72828 * 7 6 4 10 10 C 1.37980 * 120.14358 * 0.02562 * 6 4 3 11 11 C 1.39554 * 119.85066 * 359.97438 * 10 6 4 12 12 C 1.47853 * 120.14199 * 179.97438 * 11 10 6 13 13 O 1.21551 * 119.99727 * 175.50243 * 12 11 10 14 14 N 1.34772 * 119.99795 * 355.50679 * 12 11 10 15 15 C 1.46503 * 119.99856 * 184.94787 * 14 12 11 16 16 C 1.50699 * 112.85093 * 60.48308 * 15 14 12 17 17 N 1.34779 * 119.99901 * 36.68643 * 16 15 14 18 18 O 1.21283 * 120.00213 * 216.69384 * 16 15 14 19 19 C 1.53778 * 113.61374 * 289.29084 * 15 14 12 20 20 C 1.53958 * 87.01953 * 220.04557 * 19 15 14 21 21 H 1.08997 * 113.53633 * 270.80972 * 20 19 15 22 22 O 1.42899 * 113.74395 * 139.94155 * 20 19 15 23 23 C 1.53777 * 113.61463 * 191.67935 * 15 14 12 24 24 H 1.09001 * 109.46978 * 262.94988 * 1 2 3 25 25 H 1.08993 * 109.47482 * 22.95319 * 1 2 3 26 26 H 1.09002 * 109.47590 * 142.95748 * 1 2 3 27 27 H 1.07998 * 119.92878 * 0.04816 * 3 2 1 28 28 H 1.08992 * 109.47144 * 269.97943 * 5 4 3 29 29 H 1.09001 * 109.46622 * 29.97842 * 5 4 3 30 30 H 1.08998 * 109.47167 * 149.97685 * 5 4 3 31 31 H 1.09003 * 109.47055 * 44.73179 * 7 6 4 32 32 H 0.96703 * 114.00184 * 59.99836 * 8 7 6 33 33 H 1.48497 * 110.00334 * 178.68480 * 9 7 6 34 34 H 1.48511 * 109.99869 * 300.00378 * 9 7 6 35 35 H 1.08004 * 120.07395 * 180.02562 * 10 6 4 36 36 H 0.97000 * 120.00759 * 4.94251 * 14 12 11 37 37 H 0.97001 * 120.00106 * 5.01412 * 17 16 15 38 38 H 0.96997 * 120.00196 * 185.00649 * 17 16 15 39 39 H 1.09006 * 113.61294 * 334.56217 * 19 15 14 40 40 H 1.08998 * 113.61665 * 105.47046 * 19 15 14 41 41 H 0.96697 * 113.99884 * 82.39951 * 22 20 19 42 42 H 1.08996 * 113.61799 * 254.52788 * 23 15 14 43 43 H 1.09004 * 113.61583 * 25.43741 * 23 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1937 0.0000 4 6 3.5819 1.1955 -0.0005 5 6 4.3305 2.5034 0.0001 6 6 4.2813 0.0018 -0.0005 7 6 5.7882 0.0134 0.0051 8 8 6.2668 0.3624 -1.2953 9 14 6.4205 -1.6773 0.4664 10 6 3.6021 -1.1992 -0.0005 11 6 2.2065 -1.2080 0.0000 12 6 1.4722 -2.4912 -0.0006 13 8 0.2595 -2.4975 0.0824 14 7 2.1474 -3.6540 -0.0931 15 6 1.4163 -4.9188 -0.2029 16 6 0.5390 -4.9833 -1.4265 17 7 0.9519 -4.4256 -2.5819 18 8 -0.5387 -5.5369 -1.3715 19 6 0.6972 -5.3292 1.0930 20 6 1.1413 -6.7714 0.7877 21 1 0.4305 -7.3251 0.1743 22 8 1.5635 -7.5000 1.9422 23 6 2.3029 -6.1611 -0.0144 24 1 -0.3633 -0.1261 1.0199 25 1 -0.3634 0.9462 -0.4007 26 1 -0.3634 -0.8203 -0.6191 27 1 1.6581 2.1290 0.0008 28 1 4.5109 2.8193 -1.0274 29 1 3.7386 3.2605 0.5143 30 1 5.2834 2.3764 0.5138 31 1 6.1433 0.7446 0.7313 32 1 5.9760 1.2325 -1.6011 33 1 7.9052 -1.6878 0.4447 34 1 5.9296 -2.0520 1.8170 35 1 4.1492 -2.1304 -0.0001 36 1 3.1174 -3.6535 -0.0870 37 1 1.8427 -4.0471 -2.6466 38 1 0.3584 -4.4029 -3.3488 39 1 1.1499 -4.9144 1.9937 40 1 -0.3829 -5.1871 1.0568 41 1 0.8374 -7.8861 2.4508 42 1 2.5172 -6.6896 -0.9433 43 1 3.1953 -5.9741 0.5830 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_9599494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:19 Heat of formation + Delta-G solvation = -96.493938 kcal Electronic energy + Delta-G solvation = -28281.982145 eV Core-core repulsion = 24294.588987 eV Total energy + Delta-G solvation = -3987.393157 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.38571 -41.33974 -39.73633 -38.88641 -37.69673 -36.45189 -34.85436 -34.45479 -34.33286 -33.02715 -29.46606 -28.76853 -27.05454 -26.46929 -25.54959 -23.92790 -23.23297 -22.25322 -21.04672 -20.37934 -19.31248 -18.82487 -18.34576 -18.26161 -17.73492 -17.04456 -16.63753 -16.45336 -16.36252 -16.05631 -15.69504 -15.50750 -15.35250 -15.01727 -14.88793 -14.81493 -14.60891 -14.11610 -13.96282 -13.75851 -13.60788 -13.49982 -13.25995 -13.03606 -12.88146 -12.80119 -12.66100 -12.43542 -12.12245 -11.84197 -11.44649 -11.31438 -11.28481 -10.99725 -10.68774 -10.59396 -10.25280 -10.00027 -9.70484 -5.08917 -0.35414 0.08595 1.23806 1.38234 1.49805 1.67368 1.86434 1.88316 2.34579 2.58083 3.14038 3.17456 3.34941 3.38069 3.42895 3.48514 3.64203 3.68299 3.70386 3.78503 3.93505 4.00684 4.15767 4.23237 4.34399 4.36535 4.42270 4.50240 4.55876 4.59740 4.75206 4.76397 4.83144 4.84535 4.92893 4.97744 5.03729 5.15867 5.26282 5.32688 5.48363 5.69875 5.74527 6.19879 6.30130 6.35815 6.64541 7.04303 7.20407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.008 4.008 3 C -0.127 4.127 4 C -0.041 4.041 5 C -0.131 4.131 6 C -0.130 4.130 7 C -0.081 4.081 8 O -0.533 6.533 9 Si 0.735 3.265 10 C -0.065 4.065 11 C -0.143 4.143 12 C 0.560 3.440 13 O -0.508 6.508 14 N -0.716 5.716 15 C 0.128 3.872 16 C 0.543 3.457 17 N -0.846 5.846 18 O -0.525 6.525 19 C -0.147 4.147 20 C 0.082 3.918 21 H 0.096 0.904 22 O -0.557 6.557 23 C -0.117 4.117 24 H 0.078 0.922 25 H 0.060 0.940 26 H 0.098 0.902 27 H 0.134 0.866 28 H 0.081 0.919 29 H 0.076 0.924 30 H 0.072 0.928 31 H 0.077 0.923 32 H 0.363 0.637 33 H -0.252 1.252 34 H -0.247 1.247 35 H 0.128 0.872 36 H 0.405 0.595 37 H 0.401 0.599 38 H 0.406 0.594 39 H 0.100 0.900 40 H 0.091 0.909 41 H 0.385 0.615 42 H 0.089 0.911 43 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.913 2.083 -1.583 4.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.009 4.009 3 C -0.145 4.145 4 C -0.041 4.041 5 C -0.187 4.187 6 C -0.130 4.130 7 C -0.189 4.189 8 O -0.338 6.338 9 Si 0.633 3.367 10 C -0.084 4.084 11 C -0.146 4.146 12 C 0.349 3.651 13 O -0.384 6.384 14 N -0.372 5.372 15 C 0.038 3.962 16 C 0.325 3.675 17 N -0.410 5.410 18 O -0.399 6.399 19 C -0.186 4.186 20 C 0.022 3.978 21 H 0.114 0.886 22 O -0.363 6.363 23 C -0.155 4.155 24 H 0.097 0.903 25 H 0.079 0.921 26 H 0.116 0.884 27 H 0.151 0.849 28 H 0.099 0.901 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.094 0.906 32 H 0.211 0.789 33 H -0.176 1.176 34 H -0.171 1.171 35 H 0.146 0.854 36 H 0.242 0.758 37 H 0.230 0.770 38 H 0.237 0.763 39 H 0.119 0.881 40 H 0.110 0.890 41 H 0.233 0.767 42 H 0.108 0.892 43 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 3.689 0.810 -0.927 3.889 hybrid contribution -0.006 2.039 0.139 2.044 sum 3.683 2.848 -0.788 4.722 Atomic orbital electron populations 1.21146 0.89539 1.03438 1.04006 1.20093 0.97069 0.91200 0.92578 1.21008 0.93219 0.97944 1.02355 1.19992 0.93780 0.94897 0.95425 1.21014 1.00521 0.94007 1.03169 1.20009 0.96134 0.92904 1.03949 1.25479 0.91973 1.12959 0.88488 1.86794 1.75289 1.40064 1.31688 0.93208 0.80969 0.79958 0.82580 1.20963 0.92885 0.97017 0.97501 1.19583 0.92962 0.93026 1.09032 1.18308 0.87308 0.83385 0.76115 1.90808 1.13309 1.86758 1.47492 1.45873 1.10165 1.04730 1.76464 1.21539 0.94845 0.84501 0.95299 1.19849 0.86124 0.77579 0.83983 1.43704 1.20316 1.62617 1.14329 1.90775 1.21738 1.43005 1.84430 1.23935 1.02891 0.96221 0.95556 1.23188 0.95892 0.90796 0.87894 0.88648 1.86464 1.37627 1.72148 1.40013 1.23345 0.98323 0.92466 1.01410 0.90325 0.92074 0.88402 0.84860 0.90087 0.90512 0.90954 0.90580 0.78879 1.17630 1.17129 0.85440 0.75806 0.77043 0.76283 0.88115 0.89026 0.76724 0.89211 0.86939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.14 8.74 36.01 0.31 0.17 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.62 16 3 C -0.13 0.06 9.31 -39.64 -0.37 -0.31 16 4 C -0.04 0.04 5.87 -104.53 -0.61 -0.57 16 5 C -0.13 0.41 8.74 36.01 0.31 0.72 16 6 C -0.13 0.12 5.26 -104.68 -0.55 -0.43 16 7 C -0.08 0.10 2.09 36.01 0.08 0.18 16 8 O -0.53 0.42 12.65 -35.23 -0.45 -0.03 16 9 Si 0.73 -1.27 30.17 -169.99 -5.13 -6.40 16 10 C -0.07 0.09 8.14 -39.19 -0.32 -0.23 16 11 C -0.14 -0.05 5.87 -104.97 -0.62 -0.66 16 12 C 0.56 0.59 7.36 -12.33 -0.09 0.50 16 13 O -0.51 -2.20 12.37 5.32 0.07 -2.13 16 14 N -0.72 1.19 4.78 -48.86 -0.23 0.95 16 15 C 0.13 -0.02 1.05 -132.16 -0.14 -0.16 16 16 C 0.54 1.04 6.22 -10.99 -0.07 0.97 16 17 N -0.85 1.09 8.79 31.22 0.27 1.36 16 18 O -0.53 -3.12 16.22 5.55 0.09 -3.03 16 19 C -0.15 -0.17 6.54 -25.83 -0.17 -0.34 16 20 C 0.08 0.01 4.82 -25.82 -0.12 -0.11 16 21 H 0.10 0.07 7.65 -51.93 -0.40 -0.32 16 22 O -0.56 -0.21 13.68 -35.23 -0.48 -0.69 16 23 C -0.12 0.20 7.20 -25.92 -0.19 0.02 16 24 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 25 H 0.06 -0.02 8.04 -51.93 -0.42 -0.44 16 26 H 0.10 0.28 5.84 -51.93 -0.30 -0.02 16 27 H 0.13 -0.26 8.05 -52.49 -0.42 -0.68 16 28 H 0.08 -0.35 7.78 -51.93 -0.40 -0.75 16 29 H 0.08 -0.26 8.08 -51.93 -0.42 -0.68 16 30 H 0.07 -0.24 6.21 -51.93 -0.32 -0.56 16 31 H 0.08 -0.13 6.47 -51.93 -0.34 -0.47 16 32 H 0.36 -1.19 7.74 45.56 0.35 -0.84 16 33 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 34 H -0.25 0.06 7.11 56.52 0.40 0.46 16 35 H 0.13 -0.52 3.49 -52.48 -0.18 -0.71 16 36 H 0.40 -1.88 6.73 -40.82 -0.27 -2.15 16 37 H 0.40 -1.53 8.49 -40.82 -0.35 -1.88 16 38 H 0.41 -0.72 8.93 -40.82 -0.36 -1.08 16 39 H 0.10 0.11 8.14 -51.93 -0.42 -0.32 16 40 H 0.09 0.32 7.62 -51.93 -0.40 -0.08 16 41 H 0.38 -1.20 9.12 45.56 0.42 -0.78 16 42 H 0.09 -0.25 8.09 -51.93 -0.42 -0.67 16 43 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 LS Contribution 348.74 15.07 5.26 5.26 Total: 0.00 -10.08 348.74 -8.47 -18.54 By element: Atomic # 1 Polarization: -8.26 SS G_CDS: -4.70 Total: -12.96 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -3.16 Total: -0.87 kcal Atomic # 7 Polarization: 2.27 SS G_CDS: 0.04 Total: 2.31 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -0.77 Total: -5.88 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.13 Total: -6.40 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -10.08 -8.47 -18.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_9599494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.950 kcal (2) G-P(sol) polarization free energy of solvation -10.078 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds