Wall clock time and date at job start Sat Mar 6 2021 22:42:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21283 * 120.00187 * 2 1 4 4 C 1.50709 * 120.00036 * 180.02562 * 2 1 3 5 5 N 1.46491 * 112.84904 * 34.67806 * 4 2 1 6 6 C 1.34781 * 119.99977 * 54.58061 * 5 4 2 7 7 O 1.21276 * 119.99979 * 4.46875 * 6 5 4 8 8 C 1.50700 * 119.99647 * 184.46590 * 6 5 4 9 9 N 1.46507 * 109.46803 * 179.97438 * 8 6 5 10 10 C 1.36828 * 125.06704 * 265.03006 * 9 8 6 11 11 C 1.34232 * 109.93728 * 179.97438 * 10 9 8 12 12 C 1.50709 * 126.50009 * 180.02562 * 11 10 9 13 13 O 1.42898 * 109.47163 * 104.97006 * 12 11 10 14 14 Si 1.86308 * 109.46782 * 344.97291 * 12 11 10 15 15 C 1.46486 * 107.00366 * 359.97438 * 11 10 9 16 16 C 1.39592 * 134.03944 * 180.02562 * 15 11 10 17 17 C 1.36664 * 119.76207 * 179.97438 * 16 15 11 18 18 C 1.38792 * 120.52895 * 359.97438 * 17 16 15 19 19 C 1.37783 * 120.66734 * 0.02562 * 18 17 16 20 20 C 1.37693 * 125.05699 * 84.72488 * 9 8 6 21 21 C 1.53777 * 113.61251 * 263.48118 * 4 2 1 22 22 C 1.53782 * 87.08263 * 270.80017 * 21 4 2 23 23 H 1.08996 * 113.61211 * 89.20179 * 22 21 4 24 24 O 1.42902 * 113.61500 * 220.02110 * 22 21 4 25 25 C 1.53777 * 87.07948 * 334.56819 * 22 21 4 26 26 H 0.96997 * 119.99909 * 174.89993 * 1 2 3 27 27 H 0.96996 * 119.99942 * 354.90269 * 1 2 3 28 28 H 0.96996 * 119.99905 * 234.30853 * 5 4 2 29 29 H 1.08995 * 109.47612 * 300.00456 * 8 6 5 30 30 H 1.08997 * 109.47294 * 60.00919 * 8 6 5 31 31 H 1.08003 * 125.02937 * 359.95642 * 10 9 8 32 32 H 1.08998 * 109.46982 * 224.97619 * 12 11 10 33 33 H 0.96697 * 114.00180 * 299.99884 * 13 12 11 34 34 H 1.48500 * 109.99992 * 58.68287 * 14 12 11 35 35 H 1.48501 * 109.99614 * 180.02562 * 14 12 11 36 36 H 1.07995 * 120.11831 * 359.95666 * 16 15 11 37 37 H 1.08002 * 119.73758 * 179.97438 * 17 16 15 38 38 H 1.08000 * 119.66556 * 179.97438 * 18 17 16 39 39 H 1.07994 * 120.11390 * 179.97438 * 19 18 17 40 40 H 1.09008 * 113.61651 * 25.34682 * 21 4 2 41 41 H 1.09005 * 113.61387 * 156.16868 * 21 4 2 42 42 H 0.96693 * 114.00023 * 180.02562 * 24 22 21 43 43 H 1.08995 * 113.61909 * 270.88368 * 25 22 21 44 44 H 1.09006 * 113.61278 * 139.97776 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3052 -0.0006 5 7 1.4243 -2.3525 -0.7691 6 6 1.0828 -2.1315 -2.0541 7 8 1.4073 -1.0975 -2.5985 8 6 0.2978 -3.1692 -2.8143 9 7 0.0541 -2.6945 -4.1787 10 6 -1.0769 -2.0469 -4.5955 11 6 -0.9792 -1.7494 -5.9008 12 6 -2.0109 -1.0378 -6.7377 13 8 -1.5850 0.3047 -6.9789 14 14 -3.6394 -1.0196 -5.8328 15 6 0.3209 -2.2466 -6.3574 16 6 0.9863 -2.2388 -7.5845 17 6 2.2277 -2.8010 -7.6866 18 6 2.8329 -3.3795 -6.5796 19 6 2.1941 -3.3982 -5.3590 20 6 0.9318 -2.8283 -5.2312 21 6 2.5478 -1.7592 1.3991 22 6 3.8374 -0.9557 1.1624 23 1 3.7688 0.0841 1.4820 24 8 5.0146 -1.6075 1.6436 25 6 3.5933 -1.1571 -0.3424 26 1 -0.4850 -0.8367 -0.0747 27 1 -0.4850 0.8367 0.0746 28 1 1.2254 -3.2065 -0.3545 29 1 0.8639 -4.1000 -2.8486 30 1 -0.6554 -3.3419 -2.3146 31 1 -1.9230 -1.8105 -3.9674 32 1 -2.1293 -1.5579 -7.6883 33 1 -1.4592 0.8278 -6.1755 34 1 -3.4839 -0.3412 -4.5209 35 1 -4.6655 -0.3211 -6.6479 36 1 0.5216 -1.7904 -8.4501 37 1 2.7420 -2.7952 -8.6363 38 1 3.8142 -3.8202 -6.6762 39 1 2.6731 -3.8510 -4.5036 40 1 1.9287 -1.3640 2.2046 41 1 2.7100 -2.8342 1.4784 42 1 5.8288 -1.1068 1.4980 43 1 4.0426 -2.0672 -0.7398 44 1 3.8182 -0.2756 -0.9431 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_9818708.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:21 Heat of formation + Delta-G solvation = -53.159813 kcal Electronic energy + Delta-G solvation = -31161.924037 eV Core-core repulsion = 26854.531796 eV Total energy + Delta-G solvation = -4307.392241 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.65934 -42.20887 -40.13989 -39.06562 -38.16767 -37.72503 -36.48377 -34.93235 -34.34708 -33.73565 -31.43414 -30.24839 -29.08467 -27.11057 -26.67375 -25.54620 -23.83004 -23.29256 -22.60486 -21.59826 -20.69781 -20.57135 -19.31389 -18.62812 -18.52134 -18.34871 -17.91093 -17.62691 -17.24889 -16.76508 -16.42608 -16.29171 -16.10805 -15.95687 -15.79267 -15.45412 -15.30920 -15.03039 -14.79244 -14.70015 -14.47823 -14.10459 -13.84331 -13.62191 -13.56883 -13.44423 -13.19704 -12.74414 -12.59672 -12.57640 -12.39070 -12.01753 -11.96806 -11.74547 -11.48173 -11.28661 -10.95133 -10.86074 -10.55931 -10.46344 -10.33889 -9.16420 -8.63919 -4.89650 0.13465 0.62175 1.21111 1.32695 1.35490 1.42464 1.60394 1.68905 1.99348 2.04366 2.26154 2.93417 3.13545 3.16594 3.31214 3.48109 3.52914 3.64659 3.68487 3.69063 3.81987 3.85487 4.03989 4.09122 4.17880 4.21499 4.29868 4.49020 4.51555 4.57876 4.59737 4.71092 4.71760 4.77977 4.78876 4.86537 4.89206 5.13211 5.16373 5.50005 5.65583 5.67153 5.72082 5.74312 6.14125 6.20597 6.23729 6.39435 6.52210 6.71416 7.02791 7.10405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.536 3.464 3 O -0.580 6.580 4 C 0.135 3.865 5 N -0.693 5.693 6 C 0.487 3.513 7 O -0.555 6.555 8 C 0.089 3.911 9 N -0.464 5.464 10 C 0.078 3.922 11 C -0.218 4.218 12 C -0.061 4.061 13 O -0.557 6.557 14 Si 0.791 3.209 15 C -0.116 4.116 16 C -0.090 4.090 17 C -0.155 4.155 18 C -0.109 4.109 19 C -0.133 4.133 20 C 0.093 3.907 21 C -0.098 4.098 22 C 0.079 3.921 23 H 0.079 0.921 24 O -0.566 6.566 25 C -0.154 4.154 26 H 0.415 0.585 27 H 0.408 0.592 28 H 0.432 0.568 29 H 0.149 0.851 30 H 0.176 0.824 31 H 0.202 0.798 32 H 0.107 0.893 33 H 0.380 0.620 34 H -0.269 1.269 35 H -0.307 1.307 36 H 0.116 0.884 37 H 0.134 0.866 38 H 0.144 0.856 39 H 0.134 0.866 40 H 0.100 0.900 41 H 0.136 0.864 42 H 0.397 0.603 43 H 0.107 0.893 44 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.614 -10.207 7.246 13.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.319 3.681 3 O -0.458 6.458 4 C 0.044 3.956 5 N -0.351 5.351 6 C 0.273 3.727 7 O -0.431 6.431 8 C -0.035 4.035 9 N -0.146 5.146 10 C -0.047 4.047 11 C -0.225 4.225 12 C -0.168 4.168 13 O -0.365 6.365 14 Si 0.694 3.306 15 C -0.120 4.120 16 C -0.109 4.109 17 C -0.174 4.174 18 C -0.128 4.128 19 C -0.153 4.153 20 C -0.012 4.012 21 C -0.135 4.135 22 C 0.019 3.981 23 H 0.097 0.903 24 O -0.374 6.374 25 C -0.193 4.193 26 H 0.246 0.754 27 H 0.240 0.760 28 H 0.273 0.727 29 H 0.166 0.834 30 H 0.193 0.807 31 H 0.218 0.782 32 H 0.125 0.875 33 H 0.229 0.771 34 H -0.195 1.195 35 H -0.235 1.235 36 H 0.134 0.866 37 H 0.152 0.848 38 H 0.161 0.839 39 H 0.152 0.848 40 H 0.118 0.882 41 H 0.154 0.846 42 H 0.247 0.753 43 H 0.125 0.875 44 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -4.917 -9.183 7.091 12.601 hybrid contribution 1.018 1.696 -0.423 2.023 sum -3.898 -7.487 6.667 10.757 Atomic orbital electron populations 1.43562 1.06079 1.14157 1.75488 1.20250 0.83622 0.90058 0.74152 1.90760 1.69348 1.34368 1.51346 1.21280 0.91833 0.86611 0.95869 1.45705 1.60555 1.17851 1.11026 1.21786 0.79944 0.88706 0.82300 1.90889 1.54153 1.29592 1.68438 1.22066 1.05479 0.96357 0.79639 1.43401 1.13947 1.49982 1.07289 1.22030 0.91182 0.96734 0.94798 1.20706 0.96847 1.09977 0.94960 1.24790 1.05017 0.82057 1.04953 1.86560 1.89405 1.23852 1.36687 0.94217 0.71800 0.88755 0.75800 1.19352 0.95831 1.03037 0.93810 1.20446 0.95212 0.99035 0.96190 1.20906 0.95665 1.00933 0.99851 1.21123 1.00386 0.99401 0.91895 1.20244 0.92526 1.03479 0.99055 1.18360 0.93274 1.01991 0.87615 1.23307 0.93984 1.03928 0.92308 1.23112 0.86574 0.96291 0.92143 0.90301 1.86421 1.17688 1.49791 1.83483 1.23914 0.93707 1.03011 0.98705 0.75442 0.76034 0.72707 0.83368 0.80673 0.78185 0.87483 0.77128 1.19466 1.23536 0.86578 0.84834 0.83859 0.84768 0.88173 0.84568 0.75291 0.87461 0.93144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.40 8.67 -173.52 -1.50 1.89 16 2 C 0.54 2.02 5.89 87.66 0.52 2.54 16 3 O -0.58 -8.39 16.19 -3.04 -0.05 -8.44 16 4 C 0.14 -0.38 1.09 3.39 0.00 -0.38 16 5 N -0.69 7.24 4.72 -423.93 -2.00 5.23 16 6 C 0.49 -2.25 7.25 87.66 0.64 -1.62 16 7 O -0.55 -4.77 15.42 -3.02 -0.05 -4.82 16 8 C 0.09 -1.02 6.48 85.63 0.56 -0.46 16 9 N -0.46 0.62 2.27 -519.99 -1.18 -0.56 16 10 C 0.08 -0.10 9.89 83.00 0.82 0.72 16 11 C -0.22 -0.95 5.57 -18.63 -0.10 -1.06 16 12 C -0.06 -0.21 3.06 71.24 0.22 0.01 16 13 O -0.56 -4.76 12.88 -148.98 -1.92 -6.68 16 14 Si 0.79 -1.93 30.82 68.60 2.11 0.18 16 15 C -0.12 -1.04 6.35 -20.20 -0.13 -1.17 16 16 C -0.09 -0.86 10.05 22.23 0.22 -0.63 16 17 C -0.15 -1.04 9.97 22.03 0.22 -0.82 16 18 C -0.11 -0.51 10.01 22.29 0.22 -0.28 16 19 C -0.13 -0.55 10.00 22.37 0.22 -0.33 16 20 C 0.09 0.52 6.80 39.03 0.27 0.78 16 21 C -0.10 0.63 7.18 31.12 0.22 0.86 16 22 C 0.08 0.01 4.82 31.12 0.15 0.16 16 23 H 0.08 0.27 7.59 -2.39 -0.02 0.25 16 24 O -0.57 0.12 13.67 -148.98 -2.04 -1.91 16 25 C -0.15 -0.34 6.88 31.12 0.21 -0.13 16 26 H 0.41 -4.71 8.14 -92.71 -0.75 -5.46 16 27 H 0.41 -1.72 8.93 -92.71 -0.83 -2.55 16 28 H 0.43 -8.43 8.66 -92.71 -0.80 -9.23 16 29 H 0.15 -2.44 8.14 -2.39 -0.02 -2.46 16 30 H 0.18 -3.75 8.12 -2.39 -0.02 -3.77 16 31 H 0.20 -1.79 6.27 -2.91 -0.02 -1.81 16 32 H 0.11 0.37 7.96 -2.39 -0.02 0.35 16 33 H 0.38 1.40 8.70 -74.06 -0.64 0.76 16 34 H -0.27 0.35 7.00 99.48 0.70 1.05 16 35 H -0.31 -1.84 7.11 99.48 0.71 -1.14 16 36 H 0.12 1.03 8.06 -2.91 -0.02 1.01 16 37 H 0.13 0.40 8.06 -2.91 -0.02 0.38 16 38 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 39 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 40 H 0.10 -0.82 8.09 -2.38 -0.02 -0.83 16 41 H 0.14 -1.51 8.14 -2.38 -0.02 -1.53 16 42 H 0.40 -2.50 9.12 -74.06 -0.68 -3.18 16 43 H 0.11 0.04 8.14 -2.39 -0.02 0.02 16 44 H 0.05 0.52 7.67 -2.38 -0.02 0.50 16 Total: 0.00 -39.84 375.95 -4.93 -44.77 By element: Atomic # 1 Polarization: -25.29 SS G_CDS: -2.57 Total: -27.86 kcal Atomic # 6 Polarization: -6.07 SS G_CDS: 4.26 Total: -1.81 kcal Atomic # 7 Polarization: 11.26 SS G_CDS: -4.69 Total: 6.57 kcal Atomic # 8 Polarization: -17.80 SS G_CDS: -4.05 Total: -21.85 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: 2.11 Total: 0.18 kcal Total: -39.84 -4.93 -44.77 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_9818708.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.388 kcal (2) G-P(sol) polarization free energy of solvation -39.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.929 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds