Wall clock time and date at job start Sat Mar 6 2021 22:42:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36770 * 125.80067 * 2 1 4 4 C 1.47259 * 126.94229 * 359.97438 * 3 2 1 5 5 O 1.21630 * 120.00013 * 359.97438 * 4 3 2 6 6 N 1.34779 * 120.00152 * 179.97438 * 4 3 2 7 7 C 1.46499 * 120.00447 * 175.03873 * 6 4 3 8 8 C 1.50697 * 112.85001 * 67.38781 * 7 6 4 9 9 N 1.34776 * 120.00048 * 34.66635 * 8 7 6 10 10 O 1.21280 * 120.00332 * 214.66036 * 8 7 6 11 11 C 1.53781 * 113.61041 * 296.19671 * 7 6 4 12 12 C 1.53781 * 87.08051 * 270.88346 * 11 7 6 13 13 H 1.09009 * 113.61212 * 219.93970 * 12 11 7 14 14 O 1.42899 * 113.61731 * 89.12033 * 12 11 7 15 15 C 1.53780 * 87.08242 * 334.56600 * 12 11 7 16 16 C 1.46691 * 106.11364 * 179.74367 * 3 2 1 17 17 C 1.34484 * 106.33390 * 0.39225 * 16 3 2 18 18 C 1.50696 * 125.57368 * 179.86825 * 17 16 3 19 19 O 1.42904 * 109.46773 * 299.71832 * 18 17 16 20 20 Si 1.86300 * 109.47190 * 179.72213 * 18 17 16 21 21 N 1.34661 * 125.80003 * 179.97438 * 2 1 3 22 22 H 1.08993 * 109.46815 * 269.99722 * 1 2 3 23 23 H 1.08999 * 109.46884 * 29.99484 * 1 2 3 24 24 H 1.08994 * 109.46779 * 149.99362 * 1 2 3 25 25 H 0.97002 * 119.99405 * 355.03658 * 6 4 3 26 26 H 0.97008 * 119.99976 * 355.00081 * 9 8 7 27 27 H 0.96995 * 119.99991 * 175.00667 * 9 8 7 28 28 H 1.08996 * 113.61659 * 25.42838 * 11 7 6 29 29 H 1.09004 * 113.61345 * 156.25283 * 11 7 6 30 30 H 0.96703 * 113.99821 * 180.02562 * 14 12 11 31 31 H 1.08994 * 113.61769 * 270.88599 * 15 12 11 32 32 H 1.09000 * 113.61559 * 139.97986 * 15 12 11 33 33 H 1.07996 * 126.83191 * 180.28292 * 16 3 2 34 34 H 1.09001 * 109.47405 * 59.71931 * 18 17 16 35 35 H 0.96701 * 113.99547 * 180.02562 * 19 18 17 36 36 H 1.48509 * 110.00033 * 59.99827 * 20 18 17 37 37 H 1.48504 * 110.00108 * 181.31672 * 20 18 17 38 38 H 0.96993 * 124.85412 * 0.02562 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0015 6 7 2.7850 3.5054 0.0001 7 6 2.3540 4.9012 -0.1102 8 6 1.5903 5.3752 1.0994 9 7 1.9182 4.9193 2.3246 10 8 0.6806 6.1668 0.9704 11 6 1.6610 5.2284 -1.4434 12 6 3.0567 5.5599 -1.9973 13 1 3.0721 6.4350 -2.6470 14 8 3.7290 4.4345 -2.5661 15 6 3.4746 5.8592 -0.5479 16 6 3.6883 0.6151 0.0063 17 6 3.6096 -0.7274 0.0007 18 6 4.7820 -1.6743 0.0012 19 8 5.5764 -1.4492 -1.1652 20 14 4.1615 -3.4309 0.0005 21 7 2.2948 -1.0922 0.0005 22 1 -0.3633 0.0000 1.0276 23 1 -0.3633 0.8900 -0.5138 24 1 -0.3633 -0.8899 -0.5139 25 1 3.7287 3.2935 0.0735 26 1 2.5964 4.2325 2.4211 27 1 1.4760 5.2780 3.1099 28 1 1.1970 4.3639 -1.9180 29 1 0.9952 6.0898 -1.3896 30 1 4.6076 4.6368 -2.9158 31 1 3.3057 6.8939 -0.2496 32 1 4.4746 5.5039 -0.2995 33 1 4.5890 1.2109 0.0123 34 1 5.3870 -1.5030 0.8916 35 1 6.3502 -2.0255 -1.2311 36 1 3.3351 -3.6772 -1.2086 37 1 5.3078 -4.3745 0.0331 38 1 1.9734 -2.0074 0.0005 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_9865296.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:25 Heat of formation + Delta-G solvation = -69.750466 kcal Electronic energy + Delta-G solvation = -24920.626938 eV Core-core repulsion = 21152.731314 eV Total energy + Delta-G solvation = -3767.895625 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.50143 -41.85465 -39.37201 -38.92099 -37.95285 -35.97142 -34.57120 -33.71140 -32.86552 -31.85633 -29.04305 -27.11043 -26.85988 -25.37544 -23.43072 -22.17027 -21.47755 -20.65047 -20.08298 -18.95537 -18.77439 -18.10782 -17.98044 -17.74673 -17.09391 -16.49841 -16.23315 -15.94157 -15.76347 -15.43968 -15.08145 -14.93129 -14.70814 -14.54141 -14.35685 -14.11903 -13.78424 -13.60057 -13.45172 -13.33108 -12.97240 -12.93430 -12.53962 -12.28784 -12.17023 -11.70546 -11.12966 -10.97515 -10.82853 -10.53509 -10.50356 -9.91679 -9.72334 -9.09203 -5.28146 0.81002 0.95631 1.26697 1.30990 1.64908 1.68928 1.97268 2.30256 2.57645 2.76741 3.05058 3.24237 3.37750 3.50232 3.61861 3.73960 3.87750 3.97166 4.12052 4.21543 4.27137 4.40192 4.55035 4.58106 4.62741 4.73828 4.80030 4.89052 4.96590 5.04878 5.18288 5.29500 5.56061 5.75009 5.89782 5.94872 6.23329 6.37933 6.46042 6.66236 6.68661 7.40304 7.49925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.127 3.873 3 C -0.238 4.238 4 C 0.597 3.403 5 O -0.535 6.535 6 N -0.699 5.699 7 C 0.137 3.863 8 C 0.534 3.466 9 N -0.849 5.849 10 O -0.535 6.535 11 C -0.115 4.115 12 C 0.082 3.918 13 H 0.079 0.921 14 O -0.542 6.542 15 C -0.157 4.157 16 C -0.123 4.123 17 C 0.017 3.983 18 C -0.041 4.041 19 O -0.530 6.530 20 Si 0.663 3.337 21 N -0.544 5.544 22 H 0.082 0.918 23 H 0.104 0.896 24 H 0.066 0.934 25 H 0.405 0.595 26 H 0.400 0.600 27 H 0.401 0.599 28 H 0.090 0.910 29 H 0.117 0.883 30 H 0.380 0.620 31 H 0.109 0.891 32 H 0.088 0.912 33 H 0.146 0.854 34 H 0.088 0.912 35 H 0.383 0.617 36 H -0.250 1.250 37 H -0.249 1.249 38 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.407 -3.863 2.958 8.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.008 3.992 3 C -0.248 4.248 4 C 0.387 3.613 5 O -0.413 6.413 6 N -0.353 5.353 7 C 0.046 3.954 8 C 0.316 3.684 9 N -0.411 5.411 10 O -0.410 6.410 11 C -0.153 4.153 12 C 0.022 3.978 13 H 0.096 0.904 14 O -0.347 6.347 15 C -0.195 4.195 16 C -0.148 4.148 17 C -0.091 4.091 18 C -0.151 4.151 19 O -0.337 6.337 20 Si 0.563 3.437 21 N -0.143 5.143 22 H 0.101 0.899 23 H 0.123 0.877 24 H 0.085 0.915 25 H 0.241 0.759 26 H 0.228 0.772 27 H 0.232 0.768 28 H 0.108 0.892 29 H 0.135 0.865 30 H 0.227 0.773 31 H 0.127 0.873 32 H 0.106 0.894 33 H 0.164 0.836 34 H 0.106 0.894 35 H 0.231 0.769 36 H -0.174 1.174 37 H -0.173 1.173 38 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 3.978 -3.929 2.311 6.050 hybrid contribution 2.321 -0.465 -0.279 2.383 sum 6.299 -4.394 2.033 7.945 Atomic orbital electron populations 1.20659 0.86486 1.04642 1.03901 1.20373 0.93742 0.85145 0.99941 1.19975 0.93023 0.91682 1.20138 1.17314 0.85167 0.83890 0.74923 1.90807 1.16410 1.84117 1.49927 1.45302 1.10290 1.03416 1.76308 1.21327 0.97193 0.83104 0.93792 1.20441 0.82852 0.80387 0.84671 1.43766 1.44732 1.44214 1.08429 1.90747 1.28947 1.35385 1.85872 1.23299 0.95481 1.04405 0.92117 1.22680 0.93895 0.89200 0.92019 0.90353 1.86565 1.34406 1.34175 1.79539 1.23923 0.97727 0.99801 0.98099 1.21721 0.95578 0.92443 1.05020 1.19077 0.83248 0.94353 1.12428 1.23961 0.92699 1.07690 0.90794 1.86620 1.41613 1.62393 1.43103 0.95732 0.85679 0.74404 0.87908 1.41631 1.05378 1.08518 1.58810 0.89928 0.87748 0.91491 0.75920 0.77199 0.76823 0.89161 0.86468 0.77251 0.87292 0.89363 0.83648 0.89421 0.76864 1.17434 1.17325 0.74737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.05 9.88 36.01 0.36 0.31 16 2 C 0.13 0.19 7.17 -81.88 -0.59 -0.40 16 3 C -0.24 -0.56 6.29 -103.35 -0.65 -1.21 16 4 C 0.60 2.06 7.29 -12.59 -0.09 1.97 16 5 O -0.54 -3.57 13.52 5.25 0.07 -3.50 16 6 N -0.70 -0.45 4.03 -49.04 -0.20 -0.65 16 7 C 0.14 0.21 0.97 -132.16 -0.13 0.09 16 8 C 0.53 2.01 6.61 -10.99 -0.07 1.94 16 9 N -0.85 -0.44 8.83 31.22 0.28 -0.16 16 10 O -0.53 -4.19 16.75 5.56 0.09 -4.10 16 11 C -0.11 -0.33 6.67 -25.92 -0.17 -0.50 16 12 C 0.08 -0.02 5.28 -25.92 -0.14 -0.16 16 13 H 0.08 -0.13 8.14 -51.92 -0.42 -0.55 16 14 O -0.54 0.01 13.09 -35.23 -0.46 -0.45 16 15 C -0.16 0.21 7.20 -25.92 -0.19 0.02 16 16 C -0.12 -0.11 10.44 -37.50 -0.39 -0.50 16 17 C 0.02 0.00 6.14 -81.86 -0.50 -0.50 16 18 C -0.04 0.07 2.97 36.00 0.11 0.18 16 19 O -0.53 0.19 12.84 -35.23 -0.45 -0.26 16 20 Si 0.66 -1.76 30.94 -169.99 -5.26 -7.02 16 21 N -0.54 0.19 5.41 -5.42 -0.03 0.16 16 22 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 23 H 0.10 0.29 6.46 -51.93 -0.34 -0.04 16 24 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.40 -0.66 7.81 -40.82 -0.32 -0.98 16 26 H 0.40 -0.68 8.29 -40.82 -0.34 -1.02 16 27 H 0.40 -0.10 8.93 -40.82 -0.36 -0.47 16 28 H 0.09 0.48 7.38 -51.93 -0.38 0.09 16 29 H 0.12 0.40 7.34 -51.93 -0.38 0.02 16 30 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 31 H 0.11 -0.17 8.10 -51.93 -0.42 -0.59 16 32 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 33 H 0.15 -0.13 7.70 -52.49 -0.40 -0.54 16 34 H 0.09 -0.33 7.96 -51.93 -0.41 -0.74 16 35 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 36 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 37 H -0.25 0.14 7.11 56.52 0.40 0.54 16 38 H 0.41 -1.17 6.70 -40.82 -0.27 -1.45 16 LS Contribution 323.58 15.07 4.88 4.88 Total: 0.00 -12.25 323.58 -7.25 -19.50 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -3.71 Total: -9.63 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: -2.46 Total: 1.23 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: 0.05 Total: -0.65 kcal Atomic # 8 Polarization: -7.56 SS G_CDS: -0.75 Total: -8.31 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.26 Total: -7.02 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -12.25 -7.25 -19.50 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_9865296.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.254 kcal (2) G-P(sol) polarization free energy of solvation -12.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds