Wall clock time and date at job start Sat Mar 6 2021 22:42:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36770 * 125.80067 * 2 1 4 4 C 1.47259 * 126.94229 * 359.97438 * 3 2 1 5 5 O 1.21630 * 120.00013 * 359.97438 * 4 3 2 6 6 N 1.34779 * 120.00152 * 179.97438 * 4 3 2 7 7 C 1.46499 * 120.00447 * 175.03873 * 6 4 3 8 8 C 1.50697 * 112.85001 * 67.38781 * 7 6 4 9 9 N 1.34776 * 120.00048 * 34.66635 * 8 7 6 10 10 O 1.21280 * 120.00332 * 214.66036 * 8 7 6 11 11 C 1.53781 * 113.61041 * 296.19671 * 7 6 4 12 12 C 1.53781 * 87.08051 * 270.88346 * 11 7 6 13 13 H 1.09009 * 113.61212 * 219.93970 * 12 11 7 14 14 O 1.42899 * 113.61731 * 89.12033 * 12 11 7 15 15 C 1.53780 * 87.08242 * 334.56600 * 12 11 7 16 16 C 1.46691 * 106.11364 * 179.74367 * 3 2 1 17 17 C 1.34484 * 106.33390 * 0.39225 * 16 3 2 18 18 C 1.50696 * 125.57368 * 179.86825 * 17 16 3 19 19 O 1.42904 * 109.46773 * 299.71832 * 18 17 16 20 20 Si 1.86300 * 109.47190 * 179.72213 * 18 17 16 21 21 N 1.34661 * 125.80003 * 179.97438 * 2 1 3 22 22 H 1.08993 * 109.46815 * 269.99722 * 1 2 3 23 23 H 1.08999 * 109.46884 * 29.99484 * 1 2 3 24 24 H 1.08994 * 109.46779 * 149.99362 * 1 2 3 25 25 H 0.97002 * 119.99405 * 355.03658 * 6 4 3 26 26 H 0.97008 * 119.99976 * 355.00081 * 9 8 7 27 27 H 0.96995 * 119.99991 * 175.00667 * 9 8 7 28 28 H 1.08996 * 113.61659 * 25.42838 * 11 7 6 29 29 H 1.09004 * 113.61345 * 156.25283 * 11 7 6 30 30 H 0.96703 * 113.99821 * 180.02562 * 14 12 11 31 31 H 1.08994 * 113.61769 * 270.88599 * 15 12 11 32 32 H 1.09000 * 113.61559 * 139.97986 * 15 12 11 33 33 H 1.07996 * 126.83191 * 180.28292 * 16 3 2 34 34 H 1.09001 * 109.47405 * 59.71931 * 18 17 16 35 35 H 0.96701 * 113.99547 * 180.02562 * 19 18 17 36 36 H 1.48509 * 110.00033 * 59.99827 * 20 18 17 37 37 H 1.48504 * 110.00108 * 181.31672 * 20 18 17 38 38 H 0.96993 * 124.85412 * 0.02562 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0015 6 7 2.7850 3.5054 0.0001 7 6 2.3540 4.9012 -0.1102 8 6 1.5903 5.3752 1.0994 9 7 1.9182 4.9193 2.3246 10 8 0.6806 6.1668 0.9704 11 6 1.6610 5.2284 -1.4434 12 6 3.0567 5.5599 -1.9973 13 1 3.0721 6.4350 -2.6470 14 8 3.7290 4.4345 -2.5661 15 6 3.4746 5.8592 -0.5479 16 6 3.6883 0.6151 0.0063 17 6 3.6096 -0.7274 0.0007 18 6 4.7820 -1.6743 0.0012 19 8 5.5764 -1.4492 -1.1652 20 14 4.1615 -3.4309 0.0005 21 7 2.2948 -1.0922 0.0005 22 1 -0.3633 0.0000 1.0276 23 1 -0.3633 0.8900 -0.5138 24 1 -0.3633 -0.8899 -0.5139 25 1 3.7287 3.2935 0.0735 26 1 2.5964 4.2325 2.4211 27 1 1.4760 5.2780 3.1099 28 1 1.1970 4.3639 -1.9180 29 1 0.9952 6.0898 -1.3896 30 1 4.6076 4.6368 -2.9158 31 1 3.3057 6.8939 -0.2496 32 1 4.4746 5.5039 -0.2995 33 1 4.5890 1.2109 0.0123 34 1 5.3870 -1.5030 0.8916 35 1 6.3502 -2.0255 -1.2311 36 1 3.3351 -3.6772 -1.2086 37 1 5.3078 -4.3745 0.0331 38 1 1.9734 -2.0074 0.0005 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_9865296.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:42:24 Heat of formation + Delta-G solvation = -81.339780 kcal Electronic energy + Delta-G solvation = -24921.129489 eV Core-core repulsion = 21152.731314 eV Total energy + Delta-G solvation = -3768.398175 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.55781 -41.96788 -39.65502 -39.06493 -37.84345 -36.06766 -34.75088 -33.87595 -32.89340 -31.89671 -29.01011 -27.22277 -26.91491 -25.40742 -23.53282 -22.27809 -21.47288 -20.74962 -20.24366 -19.07736 -18.66467 -18.12206 -17.98425 -17.93405 -17.16868 -16.61251 -16.23399 -16.06515 -15.86262 -15.50882 -15.26651 -14.94560 -14.82880 -14.58862 -14.47757 -14.07120 -13.84951 -13.66369 -13.45601 -13.32627 -13.18281 -12.90408 -12.54503 -12.33133 -12.12563 -11.86383 -11.31264 -10.99707 -10.91921 -10.72802 -10.53844 -10.08492 -9.79445 -9.13120 -5.07409 0.68311 1.10625 1.30032 1.41847 1.47097 1.81283 1.96185 2.25361 2.42136 2.62114 3.06834 3.33528 3.42135 3.48963 3.69147 3.71042 3.86637 3.93808 4.12407 4.21655 4.39348 4.47219 4.52669 4.63481 4.70159 4.72883 4.78489 4.83869 4.87398 4.94609 5.02999 5.23702 5.44288 5.71289 5.81570 5.87399 6.33243 6.39791 6.58422 6.62400 6.93304 7.22406 7.32639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.116 3.884 3 C -0.260 4.260 4 C 0.592 3.408 5 O -0.576 6.576 6 N -0.681 5.681 7 C 0.133 3.867 8 C 0.526 3.474 9 N -0.833 5.833 10 O -0.585 6.585 11 C -0.131 4.131 12 C 0.094 3.906 13 H 0.096 0.904 14 O -0.559 6.559 15 C -0.138 4.138 16 C -0.130 4.130 17 C 0.012 3.988 18 C -0.047 4.047 19 O -0.553 6.553 20 Si 0.745 3.255 21 N -0.536 5.536 22 H 0.089 0.911 23 H 0.077 0.923 24 H 0.086 0.914 25 H 0.418 0.582 26 H 0.412 0.588 27 H 0.406 0.594 28 H 0.057 0.943 29 H 0.103 0.897 30 H 0.400 0.600 31 H 0.114 0.886 32 H 0.118 0.882 33 H 0.162 0.838 34 H 0.115 0.885 35 H 0.399 0.601 36 H -0.297 1.297 37 H -0.275 1.275 38 H 0.424 0.576 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.752 -4.556 3.560 10.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.003 4.003 3 C -0.270 4.270 4 C 0.383 3.617 5 O -0.457 6.457 6 N -0.335 5.335 7 C 0.042 3.958 8 C 0.310 3.690 9 N -0.395 5.395 10 O -0.464 6.464 11 C -0.170 4.170 12 C 0.034 3.966 13 H 0.114 0.886 14 O -0.367 6.367 15 C -0.176 4.176 16 C -0.153 4.153 17 C -0.096 4.096 18 C -0.157 4.157 19 O -0.363 6.363 20 Si 0.649 3.351 21 N -0.136 5.136 22 H 0.107 0.893 23 H 0.096 0.904 24 H 0.105 0.895 25 H 0.257 0.743 26 H 0.243 0.757 27 H 0.237 0.763 28 H 0.076 0.924 29 H 0.121 0.879 30 H 0.250 0.750 31 H 0.132 0.868 32 H 0.136 0.864 33 H 0.180 0.820 34 H 0.133 0.867 35 H 0.251 0.749 36 H -0.224 1.224 37 H -0.200 1.200 38 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges 6.417 -4.650 2.950 8.456 hybrid contribution 1.600 -0.331 -0.501 1.709 sum 8.018 -4.982 2.449 9.752 Atomic orbital electron populations 1.20595 0.86289 1.04246 1.04215 1.20513 0.94168 0.85649 0.99997 1.20066 0.94256 0.91246 1.21421 1.17607 0.84884 0.84833 0.74349 1.90790 1.18179 1.84760 1.51979 1.45110 1.10591 1.02630 1.75182 1.21376 0.98276 0.84017 0.92150 1.20874 0.82385 0.79790 0.85935 1.43663 1.44391 1.43708 1.07780 1.90716 1.31156 1.37823 1.86675 1.23308 0.97284 1.02606 0.93772 1.22553 0.91538 0.89422 0.93085 0.88643 1.86518 1.35902 1.34527 1.79759 1.23886 0.97922 0.99253 0.96544 1.21938 0.95311 0.92949 1.05149 1.19473 0.83805 0.94760 1.11566 1.24186 0.92435 1.07512 0.91521 1.86567 1.42643 1.63381 1.43724 0.94784 0.82638 0.72319 0.85373 1.41637 1.05240 1.08730 1.58026 0.89272 0.90440 0.89495 0.74291 0.75726 0.76319 0.92443 0.87862 0.74956 0.86769 0.86385 0.81999 0.86703 0.74945 1.22444 1.20034 0.73458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.22 9.88 71.24 0.70 0.49 16 2 C 0.12 0.42 7.17 41.78 0.30 0.72 16 3 C -0.26 -1.40 6.29 -19.04 -0.12 -1.52 16 4 C 0.59 4.96 7.29 86.61 0.63 5.59 16 5 O -0.58 -9.34 13.52 -4.13 -0.06 -9.39 16 6 N -0.68 -1.13 4.03 -427.30 -1.72 -2.85 16 7 C 0.13 0.52 0.97 3.38 0.00 0.52 16 8 C 0.53 4.69 6.61 87.66 0.58 5.27 16 9 N -0.83 -1.29 8.83 -173.54 -1.53 -2.82 16 10 O -0.58 -10.64 16.75 -3.03 -0.05 -10.69 16 11 C -0.13 -1.03 6.67 31.12 0.21 -0.82 16 12 C 0.09 -0.08 5.28 31.12 0.16 0.09 16 13 H 0.10 -0.39 8.14 -2.38 -0.02 -0.41 16 14 O -0.56 0.44 13.09 -148.98 -1.95 -1.51 16 15 C -0.14 0.52 7.20 31.12 0.22 0.74 16 16 C -0.13 -0.13 10.44 23.62 0.25 0.12 16 17 C 0.01 -0.01 6.14 40.98 0.25 0.25 16 18 C -0.05 0.24 2.97 71.23 0.21 0.45 16 19 O -0.55 1.17 12.84 -148.98 -1.91 -0.75 16 20 Si 0.74 -4.62 30.94 68.60 2.12 -2.50 16 21 N -0.54 0.53 5.41 -171.07 -0.93 -0.39 16 22 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 23 H 0.08 0.65 6.46 -2.39 -0.02 0.64 16 24 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 25 H 0.42 -1.76 7.81 -92.71 -0.72 -2.48 16 26 H 0.41 -1.51 8.29 -92.70 -0.77 -2.27 16 27 H 0.41 0.04 8.93 -92.71 -0.83 -0.79 16 28 H 0.06 0.81 7.38 -2.39 -0.02 0.80 16 29 H 0.10 1.04 7.34 -2.38 -0.02 1.02 16 30 H 0.40 -4.03 9.12 -74.06 -0.68 -4.70 16 31 H 0.11 -0.47 8.10 -2.39 -0.02 -0.49 16 32 H 0.12 -1.12 8.10 -2.39 -0.02 -1.14 16 33 H 0.16 -0.55 7.70 -2.91 -0.02 -0.58 16 34 H 0.12 -1.18 7.96 -2.39 -0.02 -1.20 16 35 H 0.40 -4.11 8.74 -74.06 -0.65 -4.76 16 36 H -0.30 -0.49 7.11 99.48 0.71 0.22 16 37 H -0.27 0.54 7.11 99.48 0.71 1.24 16 38 H 0.42 -2.60 6.70 -92.71 -0.62 -3.22 16 Total: 0.00 -31.69 323.58 -5.66 -37.35 By element: Atomic # 1 Polarization: -15.30 SS G_CDS: -3.04 Total: -18.34 kcal Atomic # 6 Polarization: 8.50 SS G_CDS: 3.40 Total: 11.90 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -4.18 Total: -6.06 kcal Atomic # 8 Polarization: -18.37 SS G_CDS: -3.97 Total: -22.34 kcal Atomic # 14 Polarization: -4.62 SS G_CDS: 2.12 Total: -2.50 kcal Total: -31.69 -5.66 -37.35 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_9865296.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.990 kcal (2) G-P(sol) polarization free energy of solvation -31.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.661 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.350 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds