Wall clock time and date at job start Sun Mar 7 2021 00:13:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34224 * 117.00222 * 2 1 4 4 O 1.20835 * 120.00118 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00263 * 179.97438 * 3 2 1 6 6 N 1.46500 * 112.84816 * 35.51402 * 5 3 2 7 7 C 1.34775 * 120.00241 * 66.99033 * 6 5 3 8 8 O 1.21697 * 119.99354 * 354.95269 * 7 6 5 9 9 C 1.46678 * 120.00303 * 174.94843 * 7 6 5 10 10 C 1.37869 * 126.23239 * 179.97438 * 9 7 6 11 11 C 1.39838 * 107.08050 * 179.72810 * 10 9 7 12 12 C 1.50709 * 126.06591 * 180.25764 * 11 10 9 13 13 O 1.42902 * 109.46719 * 65.20731 * 12 11 10 14 14 Si 1.86299 * 109.47036 * 185.20918 * 12 11 10 15 15 C 1.35451 * 107.86687 * 0.41496 * 11 10 9 16 16 N 1.35527 * 108.86985 * 359.58153 * 15 11 10 17 17 C 1.53784 * 113.69511 * 264.24475 * 5 3 2 18 18 C 1.53777 * 87.08330 * 220.00593 * 17 5 3 19 19 H 1.09005 * 113.68756 * 139.99132 * 18 17 5 20 20 O 1.42900 * 113.61575 * 270.87989 * 18 17 5 21 21 C 1.42895 * 114.00362 * 247.50050 * 20 18 17 22 22 C 1.53780 * 113.61735 * 166.70822 * 5 3 2 23 23 H 1.08999 * 109.47329 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.46905 * 299.99950 * 1 2 3 25 25 H 1.09004 * 109.47041 * 59.99325 * 1 2 3 26 26 H 0.97007 * 119.99742 * 246.99190 * 6 5 3 27 27 H 1.07998 * 126.46179 * 359.97438 * 10 9 7 28 28 H 1.09000 * 109.47159 * 305.21344 * 12 11 10 29 29 H 0.96701 * 113.99899 * 60.00648 * 13 12 11 30 30 H 1.48498 * 109.99676 * 180.02562 * 14 12 11 31 31 H 1.48504 * 109.99879 * 301.32092 * 14 12 11 32 32 H 1.08003 * 125.56091 * 179.84004 * 15 11 10 33 33 H 0.97006 * 125.67458 * 180.30188 * 16 15 11 34 34 H 1.09002 * 113.60889 * 334.55906 * 17 5 3 35 35 H 1.09001 * 113.61408 * 105.45408 * 17 5 3 36 36 H 1.08995 * 109.47145 * 59.99709 * 21 20 18 37 37 H 1.09001 * 109.47271 * 180.02562 * 21 20 18 38 38 H 1.09003 * 109.47106 * 300.00270 * 21 20 18 39 39 H 1.08996 * 113.61586 * 254.61830 * 22 5 3 40 40 H 1.08997 * 113.61393 * 25.51876 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1922 0.2070 -0.7832 7 6 4.0356 0.1728 -2.1214 8 8 3.3004 0.9736 -2.6685 9 6 4.7512 -0.8293 -2.9182 10 6 4.6858 -0.9803 -4.2871 11 6 5.5261 -2.0462 -4.6234 12 6 5.7781 -2.5733 -6.0126 13 8 6.4425 -1.5736 -6.7880 14 14 6.8472 -4.0958 -5.9148 15 6 6.0706 -2.5233 -3.4786 16 7 5.6106 -1.7902 -2.4356 17 6 4.1755 1.4485 1.4019 18 6 5.1715 2.4295 0.7614 19 1 5.3799 3.3055 1.3758 20 8 6.3574 1.8019 0.2697 21 6 7.5414 2.1518 0.9890 22 6 4.1099 2.6764 -0.3234 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5140 -0.8900 26 1 4.7194 -0.4754 -0.3390 27 1 4.0995 -0.3847 -4.9712 28 1 4.8279 -2.8260 -6.4832 29 1 7.2970 -1.2996 -6.4274 30 1 7.1035 -4.6249 -7.2784 31 1 8.1330 -3.7714 -5.2463 32 1 6.7621 -3.3500 -3.4088 33 1 5.8480 -1.9205 -1.5041 34 1 3.4993 1.9172 2.1169 35 1 4.6426 0.5433 1.7902 36 1 7.4320 1.8592 2.0332 37 1 8.3969 1.6350 0.5542 38 1 7.6986 3.2288 0.9282 39 1 4.5240 2.7626 -1.3280 40 1 3.4159 3.4808 -0.0801 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:31 Heat of formation + Delta-G solvation = -102.222225 kcal Electronic energy + Delta-G solvation = -26868.673102 eV Core-core repulsion = 22846.113115 eV Total energy + Delta-G solvation = -4022.559987 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.129 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.66802 -42.10112 -40.45469 -39.49819 -37.71964 -37.61412 -36.95569 -34.30759 -32.46802 -30.71690 -29.29240 -27.95681 -27.19001 -26.87642 -26.12806 -24.14466 -22.63679 -21.25347 -20.90443 -20.43746 -20.00651 -19.09121 -18.09604 -17.68676 -17.36801 -17.28590 -16.94925 -16.86688 -16.30050 -16.22684 -15.91163 -15.62267 -15.50600 -14.90468 -14.84452 -14.43976 -14.38176 -14.21563 -13.90766 -13.78310 -13.49732 -13.39635 -13.32763 -12.99332 -12.64830 -12.37796 -12.25207 -12.14180 -11.77393 -11.70311 -11.54418 -11.12197 -10.80418 -10.44616 -10.26525 -9.93662 -9.28776 -4.93256 0.42979 1.10553 1.34966 1.54241 1.61407 1.71475 1.82238 2.00406 2.04309 2.39827 2.42144 3.09640 3.12629 3.40728 3.54336 3.66172 3.79192 3.91867 4.04766 4.07165 4.19976 4.22081 4.26256 4.30517 4.31624 4.38309 4.40702 4.53098 4.63272 4.64274 4.65381 4.76514 4.90540 4.94116 5.08661 5.19546 5.42481 5.61132 5.82204 5.99261 6.21391 6.38402 6.57644 6.76305 7.10192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.353 6.353 3 C 0.472 3.528 4 O -0.495 6.495 5 C 0.166 3.834 6 N -0.696 5.696 7 C 0.598 3.402 8 O -0.517 6.517 9 C -0.052 4.052 10 C -0.074 4.074 11 C -0.209 4.209 12 C -0.040 4.040 13 O -0.530 6.530 14 Si 0.684 3.316 15 C 0.036 3.964 16 N -0.532 5.532 17 C -0.144 4.144 18 C 0.067 3.933 19 H 0.092 0.908 20 O -0.364 6.364 21 C 0.028 3.972 22 C -0.122 4.122 23 H 0.102 0.898 24 H 0.064 0.936 25 H 0.065 0.935 26 H 0.403 0.597 27 H 0.150 0.850 28 H 0.115 0.885 29 H 0.374 0.626 30 H -0.259 1.259 31 H -0.261 1.261 32 H 0.175 0.825 33 H 0.419 0.581 34 H 0.114 0.886 35 H 0.095 0.905 36 H 0.045 0.955 37 H 0.088 0.912 38 H 0.046 0.954 39 H 0.096 0.904 40 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.871 -4.610 7.000 9.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.269 6.269 3 C 0.313 3.687 4 O -0.380 6.380 5 C 0.077 3.923 6 N -0.349 5.349 7 C 0.386 3.614 8 O -0.392 6.392 9 C -0.164 4.164 10 C -0.101 4.101 11 C -0.216 4.216 12 C -0.151 4.151 13 O -0.336 6.336 14 Si 0.585 3.415 15 C -0.101 4.101 16 N -0.128 5.128 17 C -0.182 4.182 18 C 0.008 3.992 19 H 0.110 0.890 20 O -0.283 6.283 21 C -0.068 4.068 22 C -0.161 4.161 23 H 0.121 0.879 24 H 0.082 0.918 25 H 0.084 0.916 26 H 0.239 0.761 27 H 0.168 0.832 28 H 0.133 0.867 29 H 0.221 0.779 30 H -0.183 1.183 31 H -0.186 1.186 32 H 0.192 0.808 33 H 0.256 0.744 34 H 0.133 0.867 35 H 0.114 0.886 36 H 0.063 0.937 37 H 0.107 0.893 38 H 0.065 0.935 39 H 0.115 0.885 40 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 3.331 -4.260 6.018 8.090 hybrid contribution 0.761 0.751 0.799 1.335 sum 4.092 -3.509 6.817 8.691 Atomic orbital electron populations 1.23323 0.75990 1.03917 1.02740 1.86504 1.23672 1.33126 1.83580 1.23654 0.91202 0.81768 0.72125 1.90682 1.66182 1.36403 1.44766 1.21048 0.84769 0.91159 0.95373 1.45258 1.54162 1.29125 1.06360 1.17034 0.80518 0.82959 0.80880 1.90907 1.37165 1.40049 1.71077 1.20236 1.03889 0.98116 0.94192 1.21210 0.99156 0.97640 0.92054 1.19817 1.04885 1.01868 0.95001 1.24332 1.03339 0.98784 0.88639 1.86612 1.37104 1.57797 1.52124 0.95397 0.80893 0.81460 0.83769 1.21881 1.02568 0.99118 0.86492 1.41912 1.35681 1.25784 1.09454 1.23817 0.98691 1.02264 0.93398 1.23011 0.85378 0.95046 0.95718 0.89020 1.87908 1.14831 1.69030 1.56499 1.22883 0.87158 1.00444 0.96324 1.23593 0.96539 0.94212 1.01713 0.87932 0.91772 0.91647 0.76143 0.83242 0.86717 0.77884 1.18348 1.18560 0.80765 0.74367 0.86726 0.88642 0.93666 0.89322 0.93523 0.88529 0.86055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.03 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.10 10.41 -39.24 -0.41 -1.51 16 3 C 0.47 1.83 6.42 36.00 0.23 2.06 16 4 O -0.49 -3.13 15.66 -18.76 -0.29 -3.43 16 5 C 0.17 0.17 1.00 -132.16 -0.13 0.04 16 6 N -0.70 -0.15 4.52 -49.22 -0.22 -0.37 16 7 C 0.60 1.91 7.27 -12.85 -0.09 1.81 16 8 O -0.52 -3.75 15.60 5.19 0.08 -3.67 16 9 C -0.05 -0.08 7.05 -81.98 -0.58 -0.66 16 10 C -0.07 -0.19 10.59 -39.12 -0.41 -0.61 16 11 C -0.21 -0.08 5.43 -105.01 -0.57 -0.65 16 12 C -0.04 -0.01 3.02 36.01 0.11 0.10 16 13 O -0.53 -1.12 12.88 -35.23 -0.45 -1.57 16 14 Si 0.68 -1.03 30.60 -169.99 -5.20 -6.24 16 15 C 0.04 -0.07 10.45 -16.91 -0.18 -0.25 16 16 N -0.53 1.10 5.99 -9.39 -0.06 1.04 16 17 C -0.14 0.31 7.20 -25.92 -0.19 0.13 16 18 C 0.07 -0.10 4.37 -25.92 -0.11 -0.21 16 19 H 0.09 -0.28 7.87 -51.93 -0.41 -0.68 16 20 O -0.36 0.31 10.13 -35.23 -0.36 -0.05 16 21 C 0.03 -0.08 10.85 101.05 1.10 1.01 16 22 C -0.12 -0.15 6.67 -25.92 -0.17 -0.32 16 23 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 24 H 0.06 0.02 8.13 -51.93 -0.42 -0.40 16 25 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 26 H 0.40 -1.13 7.81 -40.82 -0.32 -1.44 16 27 H 0.15 0.55 8.06 -52.49 -0.42 0.13 16 28 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 29 H 0.37 -0.31 8.70 45.56 0.40 0.09 16 30 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 31 H -0.26 0.02 7.11 56.52 0.40 0.42 16 32 H 0.18 -0.84 6.21 -52.48 -0.33 -1.16 16 33 H 0.42 -2.20 8.20 -40.82 -0.33 -2.53 16 34 H 0.11 -0.33 8.10 -51.93 -0.42 -0.75 16 35 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 36 H 0.04 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.10 0.32 7.41 -51.93 -0.38 -0.07 16 40 H 0.12 0.16 7.35 -51.93 -0.38 -0.22 16 LS Contribution 345.49 15.07 5.21 5.21 Total: 0.00 -11.02 345.49 -6.81 -17.83 By element: Atomic # 1 Polarization: -5.63 SS G_CDS: -5.17 Total: -10.80 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: 0.06 Total: 3.55 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.28 Total: 0.67 kcal Atomic # 8 Polarization: -8.80 SS G_CDS: -1.43 Total: -10.23 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.20 Total: -6.24 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -11.02 -6.81 -17.83 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.387 kcal (2) G-P(sol) polarization free energy of solvation -11.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.835 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds