Wall clock time and date at job start Sun Mar 7 2021 00:13:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34226 * 116.99753 * 2 1 4 4 O 1.20824 * 120.00271 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99676 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.85238 * 334.66404 * 5 3 2 7 7 C 1.34784 * 119.99566 * 50.33568 * 6 5 3 8 8 O 1.21694 * 119.99995 * 358.25260 * 7 6 5 9 9 C 1.46678 * 119.99548 * 178.25348 * 7 6 5 10 10 C 1.37874 * 126.23729 * 354.65598 * 9 7 6 11 11 C 1.39827 * 107.08774 * 180.02562 * 10 9 7 12 12 C 1.50703 * 126.06958 * 179.97438 * 11 10 9 13 13 O 1.42907 * 109.46870 * 65.00003 * 12 11 10 14 14 Si 1.86298 * 109.47091 * 184.99942 * 12 11 10 15 15 C 1.35452 * 107.86668 * 0.02562 * 11 10 9 16 16 N 1.35543 * 108.87123 * 359.73089 * 15 11 10 17 17 C 1.46492 * 125.68223 * 180.30604 * 16 15 11 18 18 C 1.53785 * 113.61252 * 203.47014 * 5 3 2 19 19 C 1.53785 * 87.08158 * 270.88512 * 18 5 3 20 20 H 1.08996 * 113.61271 * 89.11310 * 19 18 5 21 21 O 1.42893 * 113.61547 * 219.93370 * 19 18 5 22 22 C 1.42902 * 114.00431 * 210.00020 * 21 19 18 23 23 C 1.53779 * 113.61284 * 105.86591 * 5 3 2 24 24 H 1.09005 * 109.46943 * 60.00606 * 1 2 3 25 25 H 1.08993 * 109.47534 * 299.99719 * 1 2 3 26 26 H 1.09001 * 109.47032 * 179.97438 * 1 2 3 27 27 H 0.96995 * 120.00135 * 230.33373 * 6 5 3 28 28 H 1.08003 * 126.45408 * 359.96831 * 10 9 7 29 29 H 1.08990 * 109.47058 * 305.00208 * 12 11 10 30 30 H 0.96692 * 113.99623 * 179.97438 * 13 12 11 31 31 H 1.48499 * 110.00330 * 300.00069 * 14 12 11 32 32 H 1.48499 * 110.00296 * 61.32193 * 14 12 11 33 33 H 1.07996 * 125.56947 * 180.02562 * 15 11 10 34 34 H 1.08999 * 109.47281 * 264.70685 * 17 16 15 35 35 H 1.09006 * 109.46934 * 24.69869 * 17 16 15 36 36 H 1.09001 * 109.47613 * 144.69974 * 17 16 15 37 37 H 1.08997 * 113.61391 * 25.43348 * 18 5 3 38 38 H 1.08997 * 113.61295 * 156.33713 * 18 5 3 39 39 H 1.08993 * 109.46794 * 59.99877 * 22 21 19 40 40 H 1.09000 * 109.47203 * 180.02562 * 22 21 19 41 41 H 1.09005 * 109.46383 * 300.00060 * 22 21 19 42 42 H 1.09004 * 113.61449 * 203.66470 * 23 5 3 43 43 H 1.09001 * 113.61293 * 334.56274 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1981 0.0863 0.5788 7 6 3.8371 -1.1417 0.1563 8 8 2.9639 -1.2643 -0.6825 9 6 4.4967 -2.3302 0.7075 10 6 5.5643 -2.3389 1.5798 11 6 5.8695 -3.6779 1.8423 12 6 6.9687 -4.1771 2.7445 13 8 6.6926 -3.7882 4.0916 14 14 7.0613 -6.0349 2.6411 15 6 5.0027 -4.4469 1.1409 16 7 4.1596 -3.6400 0.4516 17 6 3.0723 -4.0873 -0.4224 18 6 4.1136 2.5979 0.5617 19 6 4.0321 3.1486 -0.8718 20 1 3.0710 3.6037 -1.1107 21 8 5.1417 3.9739 -1.2319 22 6 4.8247 4.9912 -2.1842 23 6 4.1618 1.6915 -1.3546 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3634 0.5137 0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 4.8761 0.1830 1.2656 28 1 6.0703 -1.4743 1.9835 29 1 7.9198 -3.7478 2.4300 30 1 7.3601 -4.0768 4.7288 31 1 5.7703 -6.6324 3.0673 32 1 7.3793 -6.4511 1.2515 33 1 4.9830 -5.5267 1.1359 34 1 3.4236 -4.1161 -1.4538 35 1 2.7501 -5.0839 -0.1204 36 1 2.2341 -3.3950 -0.3432 37 1 3.4351 3.0908 1.2580 38 1 5.1318 2.5224 0.9432 39 1 4.0564 5.6463 -1.7737 40 1 5.7192 5.5734 -2.4052 41 1 4.4567 4.5291 -3.1003 42 1 5.1933 1.3686 -1.4961 43 1 3.5222 1.4530 -2.2044 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:34 Heat of formation + Delta-G solvation = -90.076701 kcal Electronic energy + Delta-G solvation = -29004.380964 eV Core-core repulsion = 24826.810027 eV Total energy + Delta-G solvation = -4177.570937 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.69547 -42.20025 -40.14110 -39.56431 -37.69484 -37.60484 -36.84918 -34.64153 -33.72752 -30.99645 -29.10292 -28.37778 -27.85446 -27.16510 -26.10914 -25.53535 -23.98469 -22.77909 -21.08792 -20.69613 -20.36619 -19.06210 -18.58834 -18.26508 -17.87763 -17.56470 -17.30753 -16.97475 -16.78931 -16.53391 -16.08958 -15.75208 -15.41474 -15.09840 -15.05962 -14.95214 -14.72584 -14.34286 -14.29425 -14.07563 -13.65667 -13.64629 -13.60238 -13.30540 -13.20447 -13.15299 -12.95639 -12.55251 -12.40663 -12.23491 -12.09434 -11.90774 -11.63889 -11.49285 -10.83454 -10.59082 -10.25913 -10.22162 -9.67362 -9.25608 -4.99165 0.45604 1.04157 1.32811 1.45911 1.53088 1.68397 1.70371 2.00528 2.14270 2.38931 2.80609 2.98810 3.24597 3.49353 3.55353 3.68862 3.75300 3.82855 3.89202 4.03546 4.10592 4.25242 4.26412 4.34421 4.35914 4.36278 4.44273 4.49110 4.50247 4.59037 4.60665 4.66362 4.69210 4.71889 4.77712 4.78054 4.81588 5.16574 5.19200 5.45467 5.63842 5.89616 6.08711 6.14327 6.36379 6.73520 6.76192 7.17527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.308 6.308 3 C 0.477 3.523 4 O -0.504 6.504 5 C 0.158 3.842 6 N -0.705 5.705 7 C 0.588 3.412 8 O -0.502 6.502 9 C -0.047 4.047 10 C -0.111 4.111 11 C -0.161 4.161 12 C -0.033 4.033 13 O -0.548 6.548 14 Si 0.682 3.318 15 C 0.019 3.981 16 N -0.403 5.403 17 C 0.068 3.932 18 C -0.117 4.117 19 C 0.067 3.933 20 H 0.105 0.895 21 O -0.371 6.371 22 C 0.028 3.972 23 C -0.143 4.143 24 H 0.062 0.938 25 H 0.060 0.940 26 H 0.099 0.901 27 H 0.411 0.589 28 H 0.148 0.852 29 H 0.071 0.929 30 H 0.379 0.621 31 H -0.254 1.254 32 H -0.257 1.257 33 H 0.164 0.836 34 H 0.080 0.920 35 H 0.083 0.917 36 H 0.102 0.898 37 H 0.096 0.904 38 H 0.116 0.884 39 H 0.046 0.954 40 H 0.089 0.911 41 H 0.043 0.957 42 H 0.113 0.887 43 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.677 -1.993 1.435 4.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.222 6.222 3 C 0.319 3.681 4 O -0.392 6.392 5 C 0.069 3.931 6 N -0.360 5.360 7 C 0.376 3.624 8 O -0.377 6.377 9 C -0.161 4.161 10 C -0.137 4.137 11 C -0.167 4.167 12 C -0.145 4.145 13 O -0.353 6.353 14 Si 0.583 3.417 15 C -0.117 4.117 16 N -0.075 5.075 17 C -0.072 4.072 18 C -0.155 4.155 19 C 0.009 3.991 20 H 0.123 0.877 21 O -0.290 6.290 22 C -0.068 4.068 23 C -0.182 4.182 24 H 0.081 0.919 25 H 0.078 0.922 26 H 0.117 0.883 27 H 0.248 0.752 28 H 0.165 0.835 29 H 0.089 0.911 30 H 0.226 0.774 31 H -0.178 1.178 32 H -0.182 1.182 33 H 0.181 0.819 34 H 0.099 0.901 35 H 0.102 0.898 36 H 0.121 0.879 37 H 0.114 0.886 38 H 0.134 0.866 39 H 0.064 0.936 40 H 0.108 0.892 41 H 0.062 0.938 42 H 0.132 0.868 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.788 -2.406 -0.024 2.998 hybrid contribution -0.330 0.441 -0.063 0.554 sum 1.457 -1.966 -0.087 2.449 Atomic orbital electron populations 1.23321 0.77500 1.03650 1.02213 1.87051 1.22248 1.30683 1.82219 1.23050 0.90291 0.82371 0.72414 1.90689 1.66109 1.36612 1.45790 1.20998 0.86661 0.86554 0.98857 1.45437 1.43492 1.03657 1.43410 1.16909 0.81704 0.81968 0.81808 1.90860 1.29527 1.85766 1.31582 1.19925 1.03245 0.84475 1.08424 1.21180 0.97021 0.97117 0.98418 1.18680 1.00996 0.93432 1.03629 1.23932 0.96753 1.10402 0.83418 1.86509 1.51786 1.81146 1.15893 0.95283 0.85987 0.75909 0.84530 1.21668 0.94148 0.96171 0.99701 1.43737 1.24594 1.04615 1.34506 1.22294 0.89285 1.01778 0.93875 1.23512 1.03367 0.90597 0.98016 1.23596 0.91235 0.89862 0.94449 0.87747 1.87918 1.33484 1.45881 1.61670 1.22864 1.02014 0.90384 0.91585 1.23989 1.03177 0.95924 0.95131 0.91944 0.92165 0.88267 0.75157 0.83462 0.91144 0.77377 1.17843 1.18162 0.81881 0.90121 0.89785 0.87927 0.88572 0.86607 0.93571 0.89232 0.93791 0.86832 0.89892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.31 -1.29 6.23 -47.63 -0.30 -1.59 16 3 C 0.48 1.83 6.98 36.01 0.25 2.08 16 4 O -0.50 -2.69 14.98 -18.75 -0.28 -2.97 16 5 C 0.16 0.20 1.23 -132.16 -0.16 0.04 16 6 N -0.70 -0.37 5.30 -49.21 -0.26 -0.63 16 7 C 0.59 1.68 7.17 -12.85 -0.09 1.59 16 8 O -0.50 -2.43 11.29 -20.14 -0.23 -2.66 16 9 C -0.05 -0.13 6.88 -81.98 -0.56 -0.69 16 10 C -0.11 -0.21 10.29 -39.12 -0.40 -0.61 16 11 C -0.16 -0.37 5.46 -105.02 -0.57 -0.94 16 12 C -0.03 0.00 3.01 36.01 0.11 0.11 16 13 O -0.55 -0.09 12.86 -35.23 -0.45 -0.55 16 14 Si 0.68 -0.92 30.60 -169.99 -5.20 -6.12 16 15 C 0.02 0.04 9.93 -16.91 -0.17 -0.12 16 16 N -0.40 -0.99 3.16 -120.24 -0.38 -1.37 16 17 C 0.07 0.02 10.36 59.84 0.62 0.64 16 18 C -0.12 0.03 6.95 -25.91 -0.18 -0.15 16 19 C 0.07 0.06 3.90 -25.77 -0.10 -0.04 16 20 H 0.10 0.15 7.05 -51.93 -0.37 -0.22 16 21 O -0.37 -0.60 10.72 -35.23 -0.38 -0.97 16 22 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 23 C -0.14 -0.14 7.30 -25.78 -0.19 -0.33 16 24 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 25 H 0.06 0.09 8.13 -51.93 -0.42 -0.34 16 26 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 27 H 0.41 -0.80 7.56 -40.82 -0.31 -1.11 16 28 H 0.15 -0.07 7.47 -52.48 -0.39 -0.47 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.38 -1.84 8.74 45.56 0.40 -1.44 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 32 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 33 H 0.16 0.11 6.21 -52.49 -0.33 -0.21 16 34 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.08 -0.15 8.12 -51.93 -0.42 -0.57 16 36 H 0.10 0.13 6.78 -51.93 -0.35 -0.23 16 37 H 0.10 0.00 7.85 -51.93 -0.41 -0.41 16 38 H 0.12 -0.23 8.13 -51.93 -0.42 -0.65 16 39 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 40 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 41 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.11 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.08 0.14 8.09 -51.93 -0.42 -0.28 16 LS Contribution 359.31 15.07 5.41 5.41 Total: 0.00 -9.71 359.31 -7.36 -17.08 By element: Atomic # 1 Polarization: -3.39 SS G_CDS: -6.01 Total: -9.40 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: 0.71 Total: 3.77 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -0.64 Total: -2.00 kcal Atomic # 8 Polarization: -7.10 SS G_CDS: -1.64 Total: -8.73 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.20 Total: -6.12 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.71 -7.36 -17.08 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.999 kcal (2) G-P(sol) polarization free energy of solvation -9.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.078 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds