Wall clock time and date at job start Sun Mar 7 2021 00:13:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34230 * 117.00019 * 2 1 4 4 O 1.20832 * 119.99905 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99896 * 179.97438 * 3 2 1 6 6 N 1.46504 * 112.90848 * 19.56700 * 5 3 2 7 7 C 1.34776 * 119.99917 * 304.08018 * 6 5 3 8 8 O 1.21699 * 119.99851 * 3.60782 * 7 6 5 9 9 C 1.46671 * 119.99965 * 183.60395 * 7 6 5 10 10 C 1.37874 * 126.23338 * 354.53109 * 9 7 6 11 11 C 1.39841 * 107.08194 * 179.84174 * 10 9 7 12 12 C 1.35446 * 107.86638 * 0.41607 * 11 10 9 13 13 C 1.50702 * 125.56354 * 179.77052 * 12 11 10 14 14 O 1.42901 * 109.47097 * 149.95904 * 13 12 11 15 15 Si 1.86299 * 109.46732 * 29.96079 * 13 12 11 16 16 N 1.35533 * 108.87212 * 359.73879 * 12 11 10 17 17 C 1.46506 * 125.67647 * 179.97438 * 16 12 11 18 18 C 1.53779 * 113.61426 * 248.31124 * 5 3 2 19 19 C 1.53779 * 87.08341 * 270.88423 * 18 5 3 20 20 H 1.09003 * 113.60895 * 89.12095 * 19 18 5 21 21 O 1.42899 * 113.61404 * 220.01518 * 19 18 5 22 22 C 1.42896 * 114.00104 * 247.49810 * 21 19 18 23 23 C 1.53777 * 87.08218 * 334.56821 * 19 18 5 24 24 H 1.09001 * 109.46745 * 299.99576 * 1 2 3 25 25 H 1.08999 * 109.47273 * 59.99935 * 1 2 3 26 26 H 1.09003 * 109.47045 * 179.97438 * 1 2 3 27 27 H 0.96989 * 119.99738 * 124.08041 * 6 5 3 28 28 H 1.07999 * 126.45333 * 359.95883 * 10 9 7 29 29 H 1.08001 * 126.06260 * 180.13006 * 11 10 9 30 30 H 1.08995 * 109.47509 * 269.96249 * 13 12 11 31 31 H 0.96707 * 114.00175 * 300.00493 * 14 13 12 32 32 H 1.48506 * 109.99761 * 179.97438 * 15 13 12 33 33 H 1.48494 * 110.00397 * 301.31609 * 15 13 12 34 34 H 1.09006 * 109.47116 * 275.99060 * 17 16 12 35 35 H 1.08989 * 109.47052 * 35.98975 * 17 16 12 36 36 H 1.09000 * 109.46738 * 155.99714 * 17 16 12 37 37 H 1.09005 * 113.61117 * 156.33554 * 18 5 3 38 38 H 1.09001 * 113.69633 * 25.44856 * 18 5 3 39 39 H 1.08999 * 109.47210 * 60.00810 * 22 21 19 40 40 H 1.09005 * 109.47284 * 180.02562 * 22 21 19 41 41 H 1.09006 * 109.47320 * 299.99984 * 22 21 19 42 42 H 1.09004 * 113.61386 * 139.97700 * 23 19 18 43 43 H 1.08998 * 113.61390 * 270.88069 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.2025 0.0348 -0.4509 7 6 3.9227 -1.1299 0.1670 8 8 3.0927 -1.1627 1.0565 9 6 4.6184 -2.3577 -0.2326 10 6 5.4977 -2.4901 -1.2862 11 6 5.9238 -3.8219 -1.3008 12 6 5.3039 -4.4677 -0.2844 13 6 5.4724 -5.9250 0.0604 14 8 5.2875 -6.1065 1.4657 15 14 7.1845 -6.4823 -0.4178 16 7 4.5079 -3.5891 0.3725 17 6 3.6690 -3.8988 1.5330 18 6 4.1537 1.8273 1.3100 19 6 4.0276 3.2264 0.6843 20 1 3.0651 3.7029 0.8710 21 8 5.1362 4.0823 0.9678 22 6 4.8146 5.1898 1.8117 23 6 4.1174 2.5355 -0.6865 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 4.8251 0.0520 -1.1944 28 1 5.8017 -1.7113 -1.9700 29 1 6.6198 -4.2591 -2.0015 30 1 4.7336 -6.5146 -0.4824 31 1 5.9121 -5.6099 2.0120 32 1 7.3636 -7.9179 -0.0824 33 1 7.4006 -6.2692 -1.8714 34 1 2.7194 -4.3136 1.1946 35 1 4.1781 -4.6257 2.1657 36 1 3.4851 -2.9874 2.1019 37 1 5.1842 1.5208 1.4898 38 1 3.5101 1.6769 2.1767 39 1 4.4400 4.8219 2.7669 40 1 5.7085 5.7908 1.9789 41 1 4.0501 5.8016 1.3327 42 1 3.4432 2.9562 -1.4326 43 1 5.1379 2.4226 -1.0525 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:37 Heat of formation + Delta-G solvation = -93.729617 kcal Electronic energy + Delta-G solvation = -29110.230515 eV Core-core repulsion = 24932.501176 eV Total energy + Delta-G solvation = -4177.729339 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.70675 -42.23357 -40.18888 -39.57613 -37.86731 -37.65946 -36.88871 -34.57014 -33.53553 -31.36021 -29.18124 -27.95329 -27.48449 -27.21618 -26.92195 -25.55722 -23.56130 -22.72251 -21.46919 -20.68787 -20.42794 -19.22727 -18.68761 -18.10384 -17.81455 -17.52133 -17.20831 -16.90988 -16.82897 -16.35663 -16.03029 -15.83188 -15.65792 -15.13468 -15.03988 -14.92399 -14.71247 -14.45372 -14.36666 -14.33829 -13.70331 -13.66270 -13.58617 -13.24905 -13.12623 -12.99830 -12.95851 -12.54700 -12.23989 -12.20424 -12.12978 -12.01629 -11.65192 -11.49898 -10.95639 -10.65396 -10.58191 -10.26914 -9.71430 -9.07545 -5.05291 0.44453 1.04163 1.09967 1.49253 1.62319 1.66026 1.71681 1.94428 2.25032 2.44080 2.81125 2.99475 3.15293 3.23770 3.50210 3.53637 3.65052 3.80760 4.01929 4.04910 4.23638 4.32559 4.32975 4.35857 4.37229 4.44503 4.45011 4.48763 4.49153 4.54188 4.63725 4.67637 4.72322 4.77955 4.79617 4.86002 5.01112 5.14902 5.20964 5.43910 5.69759 5.99639 6.14450 6.15816 6.30365 6.40037 6.74183 7.19318 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.321 6.321 3 C 0.481 3.519 4 O -0.504 6.504 5 C 0.159 3.841 6 N -0.705 5.705 7 C 0.593 3.407 8 O -0.513 6.513 9 C -0.048 4.048 10 C -0.136 4.136 11 C -0.204 4.204 12 C 0.014 3.986 13 C -0.049 4.049 14 O -0.542 6.542 15 Si 0.723 3.277 16 N -0.388 5.388 17 C 0.055 3.945 18 C -0.141 4.141 19 C 0.067 3.933 20 H 0.106 0.894 21 O -0.372 6.372 22 C 0.028 3.972 23 C -0.117 4.117 24 H 0.063 0.937 25 H 0.061 0.939 26 H 0.100 0.900 27 H 0.410 0.590 28 H 0.146 0.854 29 H 0.147 0.853 30 H 0.119 0.881 31 H 0.381 0.619 32 H -0.253 1.253 33 H -0.252 1.252 34 H 0.072 0.928 35 H 0.102 0.898 36 H 0.101 0.899 37 H 0.113 0.887 38 H 0.083 0.917 39 H 0.044 0.956 40 H 0.089 0.911 41 H 0.045 0.955 42 H 0.094 0.906 43 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.766 0.337 -0.062 3.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.235 6.235 3 C 0.322 3.678 4 O -0.392 6.392 5 C 0.070 3.930 6 N -0.360 5.360 7 C 0.381 3.619 8 O -0.389 6.389 9 C -0.162 4.162 10 C -0.163 4.163 11 C -0.228 4.228 12 C -0.104 4.104 13 C -0.159 4.159 14 O -0.348 6.348 15 Si 0.623 3.377 16 N -0.061 5.061 17 C -0.086 4.086 18 C -0.179 4.179 19 C 0.008 3.992 20 H 0.124 0.876 21 O -0.290 6.290 22 C -0.068 4.068 23 C -0.155 4.155 24 H 0.082 0.918 25 H 0.080 0.920 26 H 0.118 0.882 27 H 0.247 0.753 28 H 0.164 0.836 29 H 0.164 0.836 30 H 0.136 0.864 31 H 0.229 0.771 32 H -0.178 1.178 33 H -0.176 1.176 34 H 0.091 0.909 35 H 0.120 0.880 36 H 0.120 0.880 37 H 0.131 0.869 38 H 0.101 0.899 39 H 0.062 0.938 40 H 0.108 0.892 41 H 0.064 0.936 42 H 0.113 0.887 43 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 2.842 -0.446 0.160 2.882 hybrid contribution -1.023 0.199 -0.472 1.144 sum 1.819 -0.247 -0.312 1.862 Atomic orbital electron populations 1.23303 0.76644 1.03787 1.02316 1.86774 1.22834 1.31480 1.82401 1.23024 0.90409 0.82130 0.72249 1.90690 1.66118 1.36518 1.45887 1.20983 0.86330 0.85351 1.00334 1.45404 1.47895 1.05323 1.37388 1.16919 0.81207 0.81952 0.81814 1.90825 1.32092 1.85713 1.30272 1.19924 1.08163 0.87022 1.01061 1.21285 0.99266 0.97497 0.98213 1.20635 1.06256 0.94434 1.01439 1.21053 0.98421 0.93138 0.97817 1.24976 1.13866 0.91609 0.85477 1.86492 1.60439 1.72543 1.15294 0.94012 0.78979 0.81642 0.83096 1.43741 1.32005 1.06523 1.23793 1.22593 0.94795 1.04540 0.86659 1.23903 1.03170 0.95252 0.95609 1.23572 0.91340 0.89636 0.94624 0.87583 1.87917 1.33364 1.38829 1.68882 1.22862 1.01975 0.88495 0.93508 1.23510 1.03353 0.90595 0.97999 0.91826 0.92039 0.88161 0.75277 0.83646 0.83584 0.86389 0.77113 1.17803 1.17603 0.90911 0.87980 0.88045 0.86853 0.89864 0.93764 0.89247 0.93592 0.88730 0.86532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.32 -1.28 6.95 -47.29 -0.33 -1.61 16 3 C 0.48 1.68 6.90 36.00 0.25 1.92 16 4 O -0.50 -2.52 14.97 -18.76 -0.28 -2.80 16 5 C 0.16 0.12 1.16 -132.16 -0.15 -0.03 16 6 N -0.71 0.14 5.26 -49.21 -0.26 -0.12 16 7 C 0.59 1.31 7.02 -12.86 -0.09 1.22 16 8 O -0.51 -2.40 11.73 -19.10 -0.22 -2.62 16 9 C -0.05 -0.08 6.88 -81.98 -0.56 -0.64 16 10 C -0.14 0.00 10.35 -39.12 -0.40 -0.41 16 11 C -0.20 -0.02 9.37 -39.98 -0.37 -0.40 16 12 C 0.01 0.01 6.14 -81.95 -0.50 -0.50 16 13 C -0.05 0.05 2.99 36.01 0.11 0.16 16 14 O -0.54 0.65 10.11 -35.23 -0.36 0.30 16 15 Si 0.72 -1.54 31.29 -169.99 -5.32 -6.86 16 16 N -0.39 -0.56 3.16 -115.62 -0.37 -0.92 16 17 C 0.05 0.04 10.22 59.85 0.61 0.65 16 18 C -0.14 -0.09 7.19 -25.92 -0.19 -0.28 16 19 C 0.07 0.04 3.89 -25.92 -0.10 -0.06 16 20 H 0.11 0.13 6.92 -51.93 -0.36 -0.23 16 21 O -0.37 -0.48 10.71 -35.23 -0.38 -0.85 16 22 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 23 C -0.12 0.09 6.97 -25.92 -0.18 -0.09 16 24 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 25 H 0.06 0.07 8.13 -51.93 -0.42 -0.36 16 26 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 27 H 0.41 -1.20 7.56 -40.82 -0.31 -1.51 16 28 H 0.15 -0.40 7.45 -52.49 -0.39 -0.79 16 29 H 0.15 -0.17 6.62 -52.49 -0.35 -0.52 16 30 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H 0.38 -1.76 8.31 45.56 0.38 -1.39 16 32 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 33 H -0.25 0.03 6.76 56.52 0.38 0.41 16 34 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 35 H 0.10 -0.11 5.26 -51.94 -0.27 -0.38 16 36 H 0.10 0.18 6.10 -51.93 -0.32 -0.14 16 37 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 39 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.09 -0.07 7.96 -51.93 -0.41 -0.48 16 43 H 0.12 -0.30 8.14 -51.93 -0.42 -0.72 16 LS Contribution 354.05 15.07 5.34 5.34 Total: 0.00 -8.64 354.05 -7.49 -16.13 By element: Atomic # 1 Polarization: -3.83 SS G_CDS: -5.89 Total: -9.71 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 0.57 Total: 3.75 kcal Atomic # 7 Polarization: -0.42 SS G_CDS: -0.62 Total: -1.04 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.57 Total: -7.59 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.32 Total: -6.86 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.64 -7.49 -16.13 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.602 kcal (2) G-P(sol) polarization free energy of solvation -8.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds