Wall clock time and date at job start Sun Mar 7 2021 00:13:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34227 * 116.99982 * 2 1 4 4 O 1.20825 * 120.00155 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00013 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.91030 * 335.17525 * 5 3 2 7 7 C 1.34775 * 119.99937 * 293.01511 * 6 5 3 8 8 O 1.21720 * 120.00092 * 4.86648 * 7 6 5 9 9 C 1.46566 * 120.00034 * 184.87390 * 7 6 5 10 10 C 1.40861 * 126.57822 * 179.97438 * 9 7 6 11 11 C 1.40089 * 132.86843 * 0.02562 * 10 9 7 12 12 C 1.36442 * 119.25452 * 179.97438 * 11 10 9 13 13 C 1.50699 * 120.29621 * 180.02562 * 12 11 10 14 14 O 1.42902 * 109.47351 * 120.02102 * 13 12 11 15 15 Si 1.86306 * 109.47252 * 240.02406 * 13 12 11 16 16 C 1.40157 * 119.41030 * 0.02562 * 12 11 10 17 17 C 1.35180 * 120.32041 * 359.95609 * 16 12 11 18 18 N 1.36241 * 120.70521 * 0.04354 * 17 16 12 19 19 N 1.40014 * 132.01316 * 180.02562 * 18 17 16 20 20 C 1.30744 * 109.60551 * 179.69643 * 19 18 17 21 21 C 1.53776 * 113.61525 * 203.92232 * 5 3 2 22 22 C 1.53774 * 87.08387 * 270.88209 * 21 5 3 23 23 H 1.09007 * 113.61509 * 89.11455 * 22 21 5 24 24 O 1.42898 * 113.61696 * 219.93049 * 22 21 5 25 25 C 1.42903 * 114.00403 * 209.99723 * 24 22 21 26 26 C 1.53774 * 87.08272 * 334.56610 * 22 21 5 27 27 H 1.09000 * 109.46965 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47028 * 300.00168 * 1 2 3 29 29 H 1.09002 * 109.46863 * 60.00380 * 1 2 3 30 30 H 0.97000 * 120.00042 * 113.00036 * 6 5 3 31 31 H 1.08005 * 120.36904 * 359.97438 * 11 10 9 32 32 H 1.09004 * 109.46939 * 0.02562 * 13 12 11 33 33 H 0.96700 * 113.99857 * 60.00384 * 14 13 12 34 34 H 1.48498 * 110.00237 * 179.97438 * 15 13 12 35 35 H 1.48501 * 109.99481 * 301.31671 * 15 13 12 36 36 H 1.08006 * 119.84281 * 179.97438 * 16 12 11 37 37 H 1.07999 * 119.65115 * 180.02562 * 17 16 12 38 38 H 1.07996 * 125.62892 * 180.25013 * 20 19 18 39 39 H 1.09003 * 113.61707 * 25.43414 * 21 5 3 40 40 H 1.09004 * 113.61632 * 156.24994 * 21 5 3 41 41 H 1.09000 * 109.47184 * 300.00336 * 25 24 22 42 42 H 1.09005 * 109.46593 * 60.00364 * 25 24 22 43 43 H 1.09001 * 109.46971 * 179.97438 * 25 24 22 44 44 H 1.09002 * 113.61627 * 270.88477 * 26 22 21 45 45 H 1.09001 * 113.61837 * 139.97529 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.2001 0.0815 0.5655 7 6 4.0572 -0.2002 1.8757 8 8 3.3301 0.4861 2.5700 9 6 4.7773 -1.3328 2.4646 10 6 4.7307 -1.7495 3.8093 11 6 4.0454 -1.2691 4.9327 12 6 4.2056 -1.9001 6.1318 13 6 3.4792 -1.4036 7.3553 14 8 2.6326 -2.4385 7.8594 15 14 4.7184 -0.9236 8.6611 16 6 5.0517 -3.0144 6.2155 17 6 5.7028 -3.4608 5.1182 18 7 5.5493 -2.8375 3.9165 19 7 6.0957 -3.0912 2.6526 20 6 5.6422 -2.2152 1.7946 21 6 4.1143 2.5932 0.5708 22 6 4.0311 3.1557 -0.8579 23 1 3.0697 3.6129 -1.0920 24 8 5.1403 3.9840 -1.2125 25 6 4.8222 5.0091 -2.1559 26 6 4.1601 1.7053 -1.3523 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 4.7225 -0.5059 -0.0027 31 1 3.3975 -0.4088 4.8506 32 1 2.8746 -0.5357 7.0916 33 1 3.1043 -3.2431 8.1147 34 1 4.0148 -0.4316 9.8727 35 1 5.5699 -2.0902 9.0063 36 1 5.1839 -3.5190 7.1612 37 1 6.3518 -4.3206 5.1949 38 1 5.8931 -2.1743 0.7450 39 1 3.4366 3.0803 1.2720 40 1 5.1325 2.5141 0.9518 41 1 4.4531 4.5548 -3.0755 42 1 4.0544 5.6609 -1.7390 43 1 5.7163 5.5937 -2.3725 44 1 5.1914 1.3838 -1.4983 45 1 3.5194 1.4755 -2.2036 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:40 Heat of formation + Delta-G solvation = -42.460401 kcal Electronic energy + Delta-G solvation = -33153.820402 eV Core-core repulsion = 28528.209931 eV Total energy + Delta-G solvation = -4625.610471 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.140 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.33374 -42.34788 -40.30281 -39.70613 -39.27495 -37.62094 -37.35772 -36.91129 -34.36303 -34.00641 -32.13289 -30.45871 -29.13544 -27.91192 -27.34049 -27.06566 -25.98215 -24.95572 -23.86578 -23.14418 -22.78940 -21.21254 -20.62093 -19.24451 -19.07200 -18.61634 -17.95205 -17.86669 -17.57396 -17.38915 -17.10711 -16.96910 -16.85325 -16.53632 -16.06541 -15.91018 -15.67541 -15.50804 -15.29825 -14.91607 -14.82369 -14.58758 -14.33961 -14.25594 -13.86654 -13.66237 -13.55907 -13.47251 -13.28538 -13.17645 -12.97188 -12.53888 -12.50375 -12.24838 -12.12709 -11.96457 -11.88075 -11.69831 -11.59854 -11.52861 -10.92750 -10.80127 -10.55013 -10.38568 -10.21359 -8.79825 -5.06443 -0.58281 -0.18183 0.95370 1.03121 1.09891 1.13180 1.46990 1.64280 1.79694 1.99083 2.04372 2.55448 2.83506 3.03389 3.12077 3.13840 3.25561 3.28378 3.40416 3.57824 3.60579 3.67784 3.82149 3.96225 4.05610 4.11567 4.22213 4.23285 4.32149 4.33936 4.40098 4.40981 4.48098 4.48594 4.57044 4.64792 4.68423 4.71669 4.81359 4.86132 4.97631 5.05087 5.12691 5.22591 5.30957 5.43871 5.61109 6.18806 6.20360 6.27987 6.48817 6.75991 7.30950 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.347 6.347 3 C 0.484 3.516 4 O -0.497 6.497 5 C 0.160 3.840 6 N -0.709 5.709 7 C 0.608 3.392 8 O -0.539 6.539 9 C -0.313 4.313 10 C 0.172 3.828 11 C -0.091 4.091 12 C -0.065 4.065 13 C -0.076 4.076 14 O -0.521 6.521 15 Si 0.696 3.304 16 C -0.162 4.162 17 C 0.124 3.876 18 N -0.266 5.266 19 N -0.312 5.312 20 C 0.122 3.878 21 C -0.111 4.111 22 C 0.065 3.935 23 H 0.104 0.896 24 O -0.371 6.371 25 C 0.028 3.972 26 C -0.141 4.141 27 H 0.102 0.898 28 H 0.065 0.935 29 H 0.064 0.936 30 H 0.406 0.594 31 H 0.165 0.835 32 H 0.126 0.874 33 H 0.375 0.625 34 H -0.247 1.247 35 H -0.252 1.252 36 H 0.157 0.843 37 H 0.177 0.823 38 H 0.200 0.800 39 H 0.093 0.907 40 H 0.111 0.889 41 H 0.043 0.957 42 H 0.045 0.955 43 H 0.089 0.911 44 H 0.118 0.882 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.254 -1.703 -1.223 3.871 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.262 6.262 3 C 0.325 3.675 4 O -0.384 6.384 5 C 0.071 3.929 6 N -0.362 5.362 7 C 0.398 3.602 8 O -0.416 6.416 9 C -0.328 4.328 10 C 0.051 3.949 11 C -0.110 4.110 12 C -0.071 4.071 13 C -0.185 4.185 14 O -0.327 6.327 15 Si 0.594 3.406 16 C -0.184 4.184 17 C -0.002 4.002 18 N -0.030 5.030 19 N -0.132 5.132 20 C -0.059 4.059 21 C -0.150 4.150 22 C 0.007 3.993 23 H 0.122 0.878 24 O -0.289 6.289 25 C -0.069 4.069 26 C -0.179 4.179 27 H 0.121 0.879 28 H 0.084 0.916 29 H 0.083 0.917 30 H 0.242 0.758 31 H 0.182 0.818 32 H 0.144 0.856 33 H 0.223 0.777 34 H -0.171 1.171 35 H -0.176 1.176 36 H 0.174 0.826 37 H 0.195 0.805 38 H 0.216 0.784 39 H 0.112 0.888 40 H 0.129 0.871 41 H 0.062 0.938 42 H 0.064 0.936 43 H 0.107 0.893 44 H 0.136 0.864 45 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 3.332 -1.699 0.079 3.741 hybrid contribution -1.098 -0.876 -0.647 1.546 sum 2.235 -2.575 -0.569 3.456 Atomic orbital electron populations 1.23326 0.75867 1.03954 1.02709 1.86501 1.23626 1.32713 1.83391 1.23113 0.90604 0.81812 0.72009 1.90679 1.66135 1.36382 1.45167 1.20938 0.85790 0.87655 0.98507 1.45438 1.54624 1.26692 1.09488 1.16822 0.79839 0.82506 0.81055 1.90805 1.38707 1.51258 1.60867 1.19471 1.14693 1.06431 0.92213 1.19265 0.92256 0.88357 0.95030 1.20696 0.99852 1.01964 0.88495 1.20416 0.95781 0.94723 0.96148 1.25085 1.01244 0.94086 0.98049 1.86710 1.35190 1.26631 1.84206 0.94388 0.80267 0.87450 0.78470 1.20707 0.99754 0.99148 0.98744 1.21517 0.99962 0.98063 0.80672 1.46074 1.29163 1.19752 1.08047 1.77654 1.23892 1.25488 0.86190 1.24085 0.91999 0.90150 0.99652 1.23486 1.03289 0.91091 0.97091 1.23607 0.91203 0.89359 0.95179 0.87774 1.87936 1.33488 1.45233 1.62247 1.22864 1.02000 0.90319 0.91710 1.23846 1.03226 0.96928 0.93877 0.87941 0.91620 0.91747 0.75787 0.81753 0.85588 0.77712 1.17117 1.17642 0.82592 0.80537 0.78371 0.88832 0.87112 0.93806 0.93600 0.89298 0.86367 0.89561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.04 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.14 10.28 -39.25 -0.40 -1.54 16 3 C 0.48 1.79 6.33 36.01 0.23 2.02 16 4 O -0.50 -2.84 14.98 -18.75 -0.28 -3.12 16 5 C 0.16 0.18 1.12 -132.16 -0.15 0.03 16 6 N -0.71 -0.01 5.01 -49.25 -0.25 -0.25 16 7 C 0.61 1.66 7.43 -12.90 -0.10 1.57 16 8 O -0.54 -3.12 14.76 5.17 0.08 -3.04 16 9 C -0.31 -0.62 6.17 -104.68 -0.65 -1.27 16 10 C 0.17 0.40 6.76 -84.07 -0.57 -0.17 16 11 C -0.09 -0.11 9.35 -39.54 -0.37 -0.48 16 12 C -0.06 0.05 4.53 -104.55 -0.47 -0.42 16 13 C -0.08 0.11 2.84 36.01 0.10 0.21 16 14 O -0.52 0.06 12.88 -35.23 -0.45 -0.40 16 15 Si 0.70 -1.59 31.97 -169.99 -5.44 -7.02 16 16 C -0.16 0.37 8.38 -39.95 -0.33 0.04 16 17 C 0.12 -0.15 11.17 -16.68 -0.19 -0.34 16 18 N -0.27 -0.43 3.86 -10.55 -0.04 -0.47 16 19 N -0.31 -0.66 12.57 30.75 0.39 -0.28 16 20 C 0.12 0.02 11.44 -17.14 -0.20 -0.17 16 21 C -0.11 -0.19 6.35 -25.93 -0.16 -0.35 16 22 C 0.07 0.05 3.90 -25.93 -0.10 -0.05 16 23 H 0.10 0.13 7.03 -51.92 -0.37 -0.23 16 24 O -0.37 -0.57 10.72 -35.23 -0.38 -0.95 16 25 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 26 C -0.14 0.15 7.21 -25.92 -0.19 -0.03 16 27 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 0.12 8.13 -51.93 -0.42 -0.31 16 29 H 0.06 0.02 8.13 -51.93 -0.42 -0.40 16 30 H 0.41 -1.30 7.64 -40.82 -0.31 -1.62 16 31 H 0.17 0.26 7.01 -52.48 -0.37 -0.11 16 32 H 0.13 -0.21 7.71 -51.93 -0.40 -0.61 16 33 H 0.38 -1.41 8.08 45.56 0.37 -1.04 16 34 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 35 H -0.25 0.32 7.05 56.52 0.40 0.72 16 36 H 0.16 -0.78 7.26 -52.48 -0.38 -1.17 16 37 H 0.18 -0.70 8.06 -52.49 -0.42 -1.12 16 38 H 0.20 -0.83 7.47 -52.49 -0.39 -1.22 16 39 H 0.09 0.32 7.86 -51.93 -0.41 -0.09 16 40 H 0.11 0.14 8.14 -51.93 -0.42 -0.28 16 41 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 44 H 0.12 -0.32 8.14 -51.93 -0.42 -0.74 16 45 H 0.09 -0.16 8.09 -51.93 -0.42 -0.58 16 LS Contribution 386.90 15.07 5.83 5.83 Total: 0.00 -11.58 386.90 -7.61 -19.19 By element: Atomic # 1 Polarization: -5.02 SS G_CDS: -5.68 Total: -10.71 kcal Atomic # 6 Polarization: 3.74 SS G_CDS: -0.98 Total: 2.76 kcal Atomic # 7 Polarization: -1.10 SS G_CDS: 0.10 Total: -1.00 kcal Atomic # 8 Polarization: -7.61 SS G_CDS: -1.44 Total: -9.05 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.44 Total: -7.02 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.58 -7.61 -19.19 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.275 kcal (2) G-P(sol) polarization free energy of solvation -11.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.855 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.186 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds