Wall clock time and date at job start Sun Mar 7 2021 00:13:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34232 * 117.00382 * 2 1 4 4 O 1.20823 * 119.99697 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00256 * 179.97438 * 3 2 1 6 6 N 1.46495 * 112.84917 * 335.63945 * 5 3 2 7 7 C 1.34778 * 120.00160 * 292.14940 * 6 5 3 8 8 O 1.21615 * 119.99635 * 5.06769 * 7 6 5 9 9 C 1.47304 * 120.00311 * 185.06508 * 7 6 5 10 10 C 1.39819 * 120.13394 * 0.02562 * 9 7 6 11 11 C 1.37580 * 119.96625 * 179.97438 * 10 9 7 12 12 C 1.50697 * 119.88442 * 179.97438 * 11 10 9 13 13 O 1.42902 * 109.47011 * 255.00408 * 12 11 10 14 14 Si 1.86297 * 109.46873 * 14.99803 * 12 11 10 15 15 C 1.39146 * 120.23607 * 0.02562 * 11 10 9 16 16 O 1.35716 * 119.86190 * 179.97438 * 15 11 10 17 17 C 1.42895 * 117.00413 * 180.02562 * 16 15 11 18 18 C 1.38720 * 120.27704 * 359.97438 * 15 11 10 19 19 C 1.38409 * 120.03381 * 359.74228 * 18 15 11 20 20 O 1.35656 * 120.12444 * 180.27579 * 19 18 15 21 21 C 1.42899 * 116.99799 * 0.23455 * 20 19 18 22 22 C 1.53781 * 113.61444 * 204.43869 * 5 3 2 23 23 C 1.53780 * 87.08045 * 219.93614 * 22 5 3 24 24 H 1.09005 * 113.61400 * 140.06923 * 23 22 5 25 25 O 1.42900 * 113.61691 * 270.88284 * 23 22 5 26 26 C 1.42902 * 114.00176 * 210.00076 * 25 23 22 27 27 C 1.53780 * 87.08300 * 25.43605 * 23 22 5 28 28 H 1.08993 * 109.46767 * 59.99867 * 1 2 3 29 29 H 1.08998 * 109.46952 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47033 * 300.00551 * 1 2 3 31 31 H 0.97005 * 120.00407 * 112.15451 * 6 5 3 32 32 H 1.08001 * 120.01883 * 0.02562 * 10 9 7 33 33 H 1.08992 * 109.47562 * 135.00399 * 12 11 10 34 34 H 0.96696 * 114.00102 * 299.99932 * 13 12 11 35 35 H 1.48498 * 110.00319 * 298.68366 * 14 12 11 36 36 H 1.48507 * 109.99660 * 60.00475 * 14 12 11 37 37 H 1.09007 * 109.47110 * 59.99709 * 17 16 15 38 38 H 1.08997 * 109.47508 * 179.97438 * 17 16 15 39 39 H 1.09003 * 109.47130 * 300.00015 * 17 16 15 40 40 H 1.08005 * 119.98758 * 180.02562 * 18 15 11 41 41 H 1.08992 * 109.47152 * 299.99723 * 21 20 19 42 42 H 1.09003 * 109.47096 * 59.99815 * 21 20 19 43 43 H 1.09003 * 109.46978 * 179.97438 * 21 20 19 44 44 H 1.09001 * 113.60973 * 105.38800 * 22 5 3 45 45 H 1.08994 * 113.69319 * 334.49847 * 22 5 3 46 46 H 1.09001 * 109.46685 * 60.00196 * 26 25 23 47 47 H 1.08995 * 109.47480 * 300.00175 * 26 25 23 48 48 H 1.08998 * 109.46901 * 180.02562 * 26 25 23 49 49 H 1.08998 * 113.61620 * 89.10971 * 27 23 22 50 50 H 1.08997 * 113.61290 * 220.01812 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1986 0.0766 0.5579 7 6 4.0688 -0.2058 1.8694 8 8 3.3522 0.4817 2.5714 9 6 4.7948 -1.3472 2.4524 10 6 5.6198 -2.1392 1.6480 11 6 6.2967 -3.2041 2.1963 12 6 7.1850 -4.0569 1.3275 13 8 6.5371 -5.3026 1.0618 14 14 7.5149 -3.1736 -0.2792 15 6 6.1634 -3.4972 3.5500 16 8 6.8342 -4.5498 4.0828 17 6 6.6525 -4.7956 5.4787 18 6 5.3476 -2.7180 4.3572 19 6 4.6659 -1.6405 3.8187 20 8 3.8720 -0.8739 4.6076 21 6 3.7890 -1.2328 5.9883 22 6 4.1142 2.5882 0.5835 23 6 5.1654 2.5560 -0.5385 24 1 5.3688 3.5341 -0.9744 25 8 6.3552 1.8464 -0.1880 26 6 7.5328 2.3296 -0.8376 27 6 4.1625 1.7158 -1.3467 28 1 -0.3632 0.5138 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 4.7106 -0.5137 -0.0169 32 1 5.7263 -1.9147 0.5970 33 1 8.1283 -4.2404 1.8417 34 1 6.3344 -5.8175 1.8548 35 1 6.2396 -2.9459 -1.0049 36 1 8.1885 -1.8764 -0.0165 37 1 5.5985 -4.9881 5.6795 38 1 7.2426 -5.6628 5.7748 39 1 6.9772 -3.9237 6.0465 40 1 5.2478 -2.9495 5.4075 41 1 3.3990 -2.2466 6.0774 42 1 4.7815 -1.1846 6.4365 43 1 3.1237 -0.5405 6.5043 44 1 4.5378 2.4795 1.5819 45 1 3.4196 3.4246 0.5072 46 1 7.6915 3.3747 -0.5717 47 1 7.4134 2.2436 -1.9175 48 1 8.3917 1.7388 -0.5192 49 1 3.4801 2.3130 -1.9515 50 1 4.6251 0.9030 -1.9065 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:47 Heat of formation + Delta-G solvation = -187.308784 kcal Electronic energy + Delta-G solvation = -38421.375791 eV Core-core repulsion = 33383.886322 eV Total energy + Delta-G solvation = -5037.489469 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.164 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.42555 -41.89714 -40.47057 -40.14163 -39.38120 -38.35396 -37.52581 -36.93290 -36.77020 -34.08163 -32.20500 -31.65295 -29.22365 -29.13633 -28.28696 -27.82923 -27.08434 -26.40474 -26.02205 -24.56750 -23.00201 -22.53781 -21.54421 -20.37442 -20.02614 -19.02725 -18.74777 -18.47280 -17.99829 -17.76468 -17.30672 -17.23673 -17.13886 -17.07729 -16.67988 -16.63651 -16.34269 -16.12840 -15.81749 -15.76142 -15.46742 -15.31987 -15.18569 -14.65385 -14.28071 -14.26914 -14.16203 -13.93917 -13.77098 -13.60909 -13.39873 -13.31579 -13.16912 -12.90680 -12.83837 -12.67965 -12.56595 -12.54420 -12.14117 -12.12128 -12.01422 -11.70962 -11.60503 -11.42628 -11.28173 -11.03724 -10.69638 -10.63795 -10.05744 -9.93252 -9.14929 -4.82546 -0.23173 0.11507 1.22823 1.38050 1.65721 1.73059 1.93362 1.94259 1.95612 1.97699 2.13364 2.53829 2.70439 3.22538 3.24851 3.42064 3.49078 3.53398 3.68124 3.70866 3.83277 3.91864 3.96635 4.01280 4.06672 4.11095 4.11787 4.14034 4.22741 4.29353 4.31189 4.35861 4.36949 4.38779 4.42949 4.46706 4.51176 4.52737 4.64134 4.71810 4.74823 4.75718 4.77556 4.89983 4.99639 5.02837 5.26140 5.39311 5.52486 5.91600 6.11256 6.25222 6.51389 6.63614 6.86599 7.34916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.350 6.350 3 C 0.475 3.525 4 O -0.501 6.501 5 C 0.165 3.835 6 N -0.697 5.697 7 C 0.576 3.424 8 O -0.510 6.510 9 C -0.200 4.200 10 C -0.007 4.007 11 C -0.188 4.188 12 C -0.068 4.068 13 O -0.536 6.536 14 Si 0.737 3.263 15 C 0.209 3.791 16 O -0.307 6.307 17 C 0.023 3.977 18 C -0.309 4.309 19 C 0.233 3.767 20 O -0.273 6.273 21 C 0.019 3.981 22 C -0.122 4.122 23 C 0.068 3.932 24 H 0.092 0.908 25 O -0.364 6.364 26 C 0.028 3.972 27 C -0.144 4.144 28 H 0.063 0.937 29 H 0.101 0.899 30 H 0.064 0.936 31 H 0.403 0.597 32 H 0.136 0.864 33 H 0.075 0.925 34 H 0.366 0.634 35 H -0.250 1.250 36 H -0.243 1.243 37 H 0.060 0.940 38 H 0.108 0.892 39 H 0.060 0.940 40 H 0.146 0.854 41 H 0.057 0.943 42 H 0.057 0.943 43 H 0.107 0.893 44 H 0.096 0.904 45 H 0.120 0.880 46 H 0.046 0.954 47 H 0.045 0.955 48 H 0.088 0.912 49 H 0.116 0.884 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.103 -3.407 -0.096 6.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.265 6.265 3 C 0.316 3.684 4 O -0.388 6.388 5 C 0.076 3.924 6 N -0.352 5.352 7 C 0.364 3.636 8 O -0.386 6.386 9 C -0.204 4.204 10 C -0.025 4.025 11 C -0.189 4.189 12 C -0.177 4.177 13 O -0.341 6.341 14 Si 0.635 3.365 15 C 0.162 3.838 16 O -0.219 6.219 17 C -0.072 4.072 18 C -0.328 4.328 19 C 0.183 3.817 20 O -0.183 6.183 21 C -0.076 4.076 22 C -0.160 4.160 23 C 0.009 3.991 24 H 0.110 0.890 25 O -0.282 6.282 26 C -0.069 4.069 27 C -0.182 4.182 28 H 0.082 0.918 29 H 0.119 0.881 30 H 0.082 0.918 31 H 0.240 0.760 32 H 0.153 0.847 33 H 0.093 0.907 34 H 0.213 0.787 35 H -0.175 1.175 36 H -0.167 1.167 37 H 0.079 0.921 38 H 0.127 0.873 39 H 0.078 0.922 40 H 0.164 0.836 41 H 0.076 0.924 42 H 0.076 0.924 43 H 0.126 0.874 44 H 0.115 0.885 45 H 0.138 0.862 46 H 0.065 0.935 47 H 0.064 0.936 48 H 0.107 0.893 49 H 0.134 0.866 50 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 4.264 -1.810 -0.630 4.675 hybrid contribution -0.709 -0.369 1.822 1.989 sum 3.555 -2.179 1.192 4.337 Atomic orbital electron populations 1.23296 0.76223 1.03809 1.02579 1.86532 1.23458 1.33149 1.83396 1.23695 0.91244 0.81689 0.71767 1.90664 1.66218 1.36415 1.45462 1.21031 0.84688 0.88379 0.98341 1.45303 1.55059 1.25423 1.09427 1.17724 0.80832 0.83798 0.81243 1.90855 1.37557 1.50240 1.59916 1.18973 1.07723 1.02031 0.91661 1.20762 0.91579 0.91740 0.98445 1.19436 1.06163 1.01275 0.92068 1.25092 0.95106 0.88093 1.09359 1.86712 1.81074 1.30631 1.35675 0.93113 0.84706 0.79090 0.79556 1.18703 0.88250 0.85522 0.91347 1.86035 1.64677 1.44749 1.26413 1.23221 1.02744 1.02740 0.78498 1.21271 1.08161 1.01573 1.01805 1.18679 0.86414 0.87296 0.89273 1.86409 1.60812 1.50741 1.20358 1.23243 1.02590 1.02138 0.79667 1.23583 0.96707 0.95061 1.00644 1.22992 0.85311 0.95107 0.95645 0.89004 1.87938 1.14958 1.57536 1.67769 1.22892 0.87415 0.99650 0.96926 1.23832 0.98793 1.01593 0.94002 0.91823 0.88071 0.91768 0.75990 0.84696 0.90668 0.78690 1.17507 1.16686 0.92104 0.87326 0.92158 0.83634 0.92391 0.92394 0.87441 0.88537 0.86196 0.93534 0.93616 0.89319 0.86596 0.88692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.09 10.56 101.05 1.07 1.15 16 2 O -0.35 -1.81 10.28 -39.26 -0.40 -2.21 16 3 C 0.48 2.62 6.47 36.00 0.23 2.85 16 4 O -0.50 -3.66 15.81 -18.75 -0.30 -3.96 16 5 C 0.16 0.52 1.01 -132.16 -0.13 0.38 16 6 N -0.70 -2.32 4.35 -49.03 -0.21 -2.53 16 7 C 0.58 3.29 7.23 -12.57 -0.09 3.20 16 8 O -0.51 -4.47 13.84 -16.66 -0.23 -4.70 16 9 C -0.20 -0.88 5.89 -104.83 -0.62 -1.50 16 10 C -0.01 -0.02 8.13 -39.23 -0.32 -0.34 16 11 C -0.19 -0.41 5.27 -104.53 -0.55 -0.96 16 12 C -0.07 -0.06 2.32 36.00 0.08 0.03 16 13 O -0.54 -0.80 12.65 -35.23 -0.45 -1.25 16 14 Si 0.74 -0.35 30.39 -169.99 -5.17 -5.52 16 15 C 0.21 0.33 6.62 -39.07 -0.26 0.07 16 16 O -0.31 -0.01 9.35 -18.85 -0.18 -0.19 16 17 C 0.02 -0.07 9.80 101.05 0.99 0.92 16 18 C -0.31 -0.45 8.01 -39.34 -0.31 -0.76 16 19 C 0.23 0.91 6.70 -38.73 -0.26 0.65 16 20 O -0.27 -1.24 8.56 -40.59 -0.35 -1.58 16 21 C 0.02 0.00 9.81 101.05 0.99 0.99 16 22 C -0.12 -0.33 6.70 -25.92 -0.17 -0.50 16 23 C 0.07 0.01 4.37 -25.92 -0.11 -0.10 16 24 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 25 O -0.36 -0.43 10.13 -35.23 -0.36 -0.79 16 26 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 27 C -0.14 0.02 7.20 -25.92 -0.19 -0.16 16 28 H 0.06 0.11 8.13 -51.93 -0.42 -0.32 16 29 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 0.20 8.13 -51.93 -0.42 -0.22 16 31 H 0.40 0.59 6.71 -40.82 -0.27 0.32 16 32 H 0.14 0.21 3.25 -52.49 -0.17 0.04 16 33 H 0.08 0.00 7.82 -51.93 -0.41 -0.41 16 34 H 0.37 -0.15 8.58 45.56 0.39 0.24 16 35 H -0.25 -0.28 6.81 56.52 0.38 0.10 16 36 H -0.24 -0.15 7.11 56.52 0.40 0.26 16 37 H 0.06 -0.23 7.65 -51.93 -0.40 -0.63 16 38 H 0.11 -0.51 8.14 -51.93 -0.42 -0.94 16 39 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 40 H 0.15 -0.17 4.50 -52.48 -0.24 -0.40 16 41 H 0.06 -0.10 7.65 -51.93 -0.40 -0.49 16 42 H 0.06 -0.10 7.67 -51.93 -0.40 -0.50 16 43 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.10 0.45 7.34 -51.93 -0.38 0.07 16 45 H 0.12 0.30 7.39 -51.93 -0.38 -0.09 16 46 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.05 -0.11 8.14 -51.93 -0.42 -0.54 16 48 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 49 H 0.12 -0.13 8.10 -51.93 -0.42 -0.55 16 50 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 LS Contribution 411.61 15.07 6.20 6.20 Total: 0.00 -10.54 411.61 -6.89 -17.43 By element: Atomic # 1 Polarization: -0.98 SS G_CDS: -6.90 Total: -7.87 kcal Atomic # 6 Polarization: 5.53 SS G_CDS: 1.44 Total: 6.98 kcal Atomic # 7 Polarization: -2.32 SS G_CDS: -0.21 Total: -2.53 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: -2.26 Total: -14.68 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.17 Total: -5.52 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.54 -6.89 -17.43 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.881 kcal (2) G-P(sol) polarization free energy of solvation -10.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds