Wall clock time and date at job start Sun Mar 7 2021 00:13:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34233 * 117.00470 * 2 1 4 4 O 1.20833 * 119.98957 * 0.02562 * 3 2 1 5 5 C 1.50689 * 120.00535 * 180.02562 * 3 2 1 6 6 N 1.46496 * 112.85232 * 35.49297 * 5 3 2 7 7 C 1.34780 * 119.99970 * 66.98775 * 6 5 3 8 8 O 1.21573 * 119.99702 * 354.93559 * 7 6 5 9 9 C 1.47694 * 120.00088 * 174.92926 * 7 6 5 10 10 C 1.39825 * 120.16544 * 180.02562 * 9 7 6 11 11 F 1.35101 * 120.11037 * 0.02562 * 10 9 7 12 12 C 1.38319 * 119.77668 * 179.97438 * 10 9 7 13 13 C 1.38197 * 120.11912 * 359.97438 * 12 10 9 14 14 C 1.38461 * 120.34243 * 0.02562 * 13 12 10 15 15 C 1.50699 * 119.89289 * 180.27656 * 14 13 12 16 16 O 1.42903 * 109.46740 * 119.72480 * 15 14 13 17 17 Si 1.86292 * 109.47234 * 359.72667 * 15 14 13 18 18 C 1.37856 * 120.21387 * 0.02562 * 14 13 12 19 19 C 1.53790 * 113.68825 * 264.22555 * 5 3 2 20 20 C 1.53783 * 87.07918 * 220.00558 * 19 5 3 21 21 H 1.09005 * 113.69097 * 139.98977 * 20 19 5 22 22 O 1.42898 * 113.61950 * 270.88502 * 20 19 5 23 23 C 1.42901 * 113.99853 * 247.50241 * 22 20 19 24 24 C 1.53780 * 113.61573 * 166.69306 * 5 3 2 25 25 H 1.08996 * 109.47193 * 299.99722 * 1 2 3 26 26 H 1.09000 * 109.47423 * 60.00290 * 1 2 3 27 27 H 1.09002 * 109.47227 * 180.02562 * 1 2 3 28 28 H 0.97004 * 120.00508 * 246.99432 * 6 5 3 29 29 H 1.08007 * 119.94050 * 180.02562 * 12 10 9 30 30 H 1.08009 * 119.83134 * 180.02562 * 13 12 10 31 31 H 1.08999 * 109.47269 * 239.72289 * 15 14 13 32 32 H 0.96699 * 114.00383 * 299.99611 * 16 15 14 33 33 H 1.48498 * 110.00106 * 179.97438 * 17 15 14 34 34 H 1.48497 * 110.00074 * 301.31846 * 17 15 14 35 35 H 1.08008 * 120.05847 * 179.97438 * 18 14 13 36 36 H 1.08995 * 113.61520 * 334.55680 * 19 5 3 37 37 H 1.08997 * 113.61263 * 105.46006 * 19 5 3 38 38 H 1.09001 * 109.47032 * 299.99039 * 23 22 20 39 39 H 1.08995 * 109.47668 * 59.99945 * 23 22 20 40 40 H 1.09005 * 109.46606 * 179.97438 * 23 22 20 41 41 H 1.09005 * 113.61126 * 254.61451 * 24 5 3 42 42 H 1.09005 * 113.61537 * 25.43011 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5662 1.2749 -0.0006 6 7 4.1916 0.2072 -0.7848 7 6 4.0339 0.1730 -2.1230 8 8 3.2987 0.9727 -2.6689 9 6 4.7542 -0.8357 -2.9260 10 6 4.5936 -0.8739 -4.3144 11 9 3.7787 0.0127 -4.9270 12 6 5.2725 -1.8217 -5.0587 13 6 6.1073 -2.7276 -4.4324 14 6 6.2700 -2.6942 -3.0578 15 6 7.1877 -3.6829 -2.3859 16 8 8.2279 -2.9797 -1.7037 17 14 7.9361 -4.8069 -3.6693 18 6 5.5993 -1.7562 -2.3023 19 6 4.1764 1.4484 1.4004 20 6 5.1720 2.4296 0.7592 21 1 5.3808 3.3056 1.3734 22 8 6.3575 1.8020 0.2665 23 6 7.5420 2.1520 0.9851 24 6 4.1095 2.6765 -0.3248 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 4.7192 -0.4753 -0.3412 29 1 5.1506 -1.8533 -6.1314 30 1 6.6355 -3.4655 -5.0181 31 1 6.6201 -4.2767 -1.6694 32 1 8.7749 -2.4295 -2.2808 33 1 8.8437 -5.7863 -3.0195 34 1 6.8632 -5.5202 -4.4076 35 1 5.7278 -1.7327 -1.2302 36 1 3.5008 1.9171 2.1159 37 1 4.6438 0.5433 1.7882 38 1 7.6991 3.2289 0.9240 39 1 7.4334 1.8592 2.0293 40 1 8.3971 1.6345 0.5500 41 1 4.5229 2.7628 -1.3298 42 1 3.4150 3.4809 -0.0823 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:50 Heat of formation + Delta-G solvation = -161.847883 kcal Electronic energy + Delta-G solvation = -31172.367115 eV Core-core repulsion = 26614.967360 eV Total energy + Delta-G solvation = -4557.399755 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.125 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.82281 -42.42578 -40.98938 -40.30837 -39.45423 -37.63165 -37.51273 -36.89932 -34.40957 -32.53037 -32.23911 -29.28232 -27.87812 -27.12743 -26.73379 -26.60081 -25.26283 -23.31583 -22.59738 -21.63191 -20.45211 -19.34564 -19.03803 -18.33204 -18.22422 -18.04863 -17.53316 -17.27426 -17.09432 -16.78984 -16.69047 -16.29060 -16.15665 -16.00935 -15.76035 -15.52431 -15.44993 -14.87643 -14.70986 -14.49877 -14.32030 -14.16902 -13.85568 -13.72614 -13.39902 -13.35799 -13.18084 -12.96199 -12.84246 -12.57716 -12.25173 -12.17325 -12.07566 -11.92678 -11.67948 -11.49539 -11.02207 -10.72303 -10.58253 -10.39137 -10.15826 -9.81118 -5.16459 -0.48888 -0.06961 1.12813 1.14733 1.49673 1.57845 1.81526 1.84812 1.86745 2.49388 2.51105 3.04334 3.15123 3.17915 3.25008 3.37919 3.43369 3.48914 3.56257 3.76417 3.88827 4.03112 4.10499 4.23525 4.28080 4.30424 4.33164 4.35486 4.37698 4.47398 4.47978 4.60123 4.66344 4.68177 4.70062 4.72618 4.80376 4.88795 4.95043 5.06386 5.25688 5.45318 5.55888 6.07795 6.32180 6.41923 6.79451 7.10832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.353 6.353 3 C 0.472 3.528 4 O -0.495 6.495 5 C 0.165 3.835 6 N -0.688 5.688 7 C 0.567 3.433 8 O -0.514 6.514 9 C -0.170 4.170 10 C 0.167 3.833 11 F -0.111 7.111 12 C -0.157 4.157 13 C -0.060 4.060 14 C -0.141 4.141 15 C -0.066 4.066 16 O -0.538 6.538 17 Si 0.687 3.313 18 C -0.026 4.026 19 C -0.144 4.144 20 C 0.068 3.932 21 H 0.092 0.908 22 O -0.362 6.362 23 C 0.029 3.971 24 C -0.122 4.122 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.102 0.898 28 H 0.409 0.591 29 H 0.150 0.850 30 H 0.141 0.859 31 H 0.118 0.882 32 H 0.381 0.619 33 H -0.252 1.252 34 H -0.255 1.255 35 H 0.140 0.860 36 H 0.114 0.886 37 H 0.096 0.904 38 H 0.045 0.955 39 H 0.044 0.956 40 H 0.090 0.910 41 H 0.095 0.905 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.805 -2.836 2.010 6.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.269 6.269 3 C 0.313 3.687 4 O -0.381 6.381 5 C 0.075 3.925 6 N -0.343 5.343 7 C 0.354 3.646 8 O -0.389 6.389 9 C -0.174 4.174 10 C 0.147 3.853 11 F -0.089 7.089 12 C -0.176 4.176 13 C -0.078 4.078 14 C -0.142 4.142 15 C -0.177 4.177 16 O -0.343 6.343 17 Si 0.589 3.411 18 C -0.045 4.045 19 C -0.182 4.182 20 C 0.009 3.991 21 H 0.110 0.890 22 O -0.280 6.280 23 C -0.068 4.068 24 C -0.160 4.160 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.120 0.880 28 H 0.247 0.753 29 H 0.167 0.833 30 H 0.159 0.841 31 H 0.135 0.865 32 H 0.228 0.772 33 H -0.177 1.177 34 H -0.180 1.180 35 H 0.158 0.842 36 H 0.132 0.868 37 H 0.115 0.885 38 H 0.064 0.936 39 H 0.063 0.937 40 H 0.109 0.891 41 H 0.114 0.886 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 4.835 -3.174 1.667 6.020 hybrid contribution -0.681 0.071 0.685 0.968 sum 4.154 -3.104 2.352 5.694 Atomic orbital electron populations 1.23312 0.76078 1.03867 1.02718 1.86509 1.23606 1.33189 1.83599 1.23683 0.91242 0.81730 0.72074 1.90677 1.66185 1.36408 1.44807 1.21069 0.84704 0.91199 0.95492 1.45250 1.53772 1.29092 1.06148 1.17961 0.81124 0.83797 0.81728 1.90899 1.36689 1.40213 1.71095 1.19948 1.03941 1.00824 0.92679 1.17747 0.89898 0.88356 0.89325 1.91633 1.69212 1.65558 1.82480 1.21152 0.99037 0.95896 1.01507 1.21092 0.96012 0.97010 0.93671 1.20325 1.00831 0.99297 0.93731 1.25032 0.90388 0.98352 1.03886 1.86516 1.44849 1.64936 1.38011 0.94746 0.83710 0.81253 0.81389 1.21024 0.91663 0.91424 1.00356 1.23821 0.98688 1.02379 0.93315 1.22994 0.85477 0.95011 0.95612 0.89050 1.87927 1.14747 1.68982 1.56391 1.22885 0.87216 1.00271 0.96394 1.23589 0.96587 0.94156 1.01714 0.91748 0.91704 0.87992 0.75301 0.83265 0.84145 0.86457 0.77163 1.17660 1.18027 0.84221 0.86772 0.88500 0.93644 0.93714 0.89149 0.88606 0.86113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.35 -1.36 10.41 -39.27 -0.41 -1.77 16 3 C 0.47 2.14 6.42 36.00 0.23 2.37 16 4 O -0.50 -3.41 15.66 -18.76 -0.29 -3.70 16 5 C 0.16 0.30 1.00 -132.16 -0.13 0.16 16 6 N -0.69 -0.86 4.47 -48.91 -0.22 -1.08 16 7 C 0.57 2.22 7.25 -12.40 -0.09 2.13 16 8 O -0.51 -4.04 14.06 5.30 0.07 -3.97 16 9 C -0.17 -0.32 5.88 -104.91 -0.62 -0.94 16 10 C 0.17 0.40 7.29 -38.96 -0.28 0.12 16 11 F -0.11 -0.59 15.55 2.25 0.04 -0.55 16 12 C -0.16 0.11 10.01 -39.57 -0.40 -0.29 16 13 C -0.06 0.13 8.66 -39.51 -0.34 -0.21 16 14 C -0.14 0.26 5.38 -104.68 -0.56 -0.31 16 15 C -0.07 0.17 2.82 36.01 0.10 0.27 16 16 O -0.54 1.17 12.76 -35.23 -0.45 0.72 16 17 Si 0.69 -2.03 29.78 -169.99 -5.06 -7.09 16 18 C -0.03 0.02 9.09 -39.19 -0.36 -0.34 16 19 C -0.14 0.21 7.20 -25.91 -0.19 0.02 16 20 C 0.07 -0.06 4.37 -25.92 -0.11 -0.18 16 21 H 0.09 -0.24 7.87 -51.93 -0.41 -0.65 16 22 O -0.36 0.10 10.13 -35.23 -0.36 -0.26 16 23 C 0.03 -0.07 10.85 101.05 1.10 1.03 16 24 C -0.12 -0.21 6.67 -25.92 -0.17 -0.38 16 25 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 26 H 0.06 0.17 8.13 -51.93 -0.42 -0.26 16 27 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.41 -0.52 6.72 -40.82 -0.27 -0.80 16 29 H 0.15 -0.39 8.06 -52.48 -0.42 -0.81 16 30 H 0.14 -0.63 4.86 -52.48 -0.25 -0.89 16 31 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 32 H 0.38 -2.18 8.70 45.56 0.40 -1.78 16 33 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 34 H -0.26 0.17 7.11 56.52 0.40 0.57 16 35 H 0.14 -0.34 6.42 -52.48 -0.34 -0.67 16 36 H 0.11 -0.26 8.10 -51.93 -0.42 -0.68 16 37 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 38 H 0.04 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.04 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 41 H 0.10 0.35 7.41 -51.93 -0.38 -0.03 16 42 H 0.12 0.21 7.35 -51.93 -0.38 -0.17 16 LS Contribution 360.85 15.07 5.44 5.44 Total: 0.00 -10.62 360.85 -7.06 -17.68 By element: Atomic # 1 Polarization: -4.94 SS G_CDS: -5.05 Total: -9.99 kcal Atomic # 6 Polarization: 5.34 SS G_CDS: -0.76 Total: 4.58 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -0.22 Total: -1.08 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -1.43 Total: -8.98 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.55 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: -5.06 Total: -7.09 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -10.62 -7.06 -17.68 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.171 kcal (2) G-P(sol) polarization free energy of solvation -10.622 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds