Wall clock time and date at job start Sun Mar 7 2021 00:13:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99558 * 2 1 4 4 O 1.20820 * 120.00034 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99912 * 180.02562 * 3 2 1 6 6 N 1.46498 * 112.84967 * 24.25644 * 5 3 2 7 7 C 1.34778 * 119.99601 * 65.91273 * 6 5 3 8 8 O 1.21276 * 120.00640 * 4.98300 * 7 6 5 9 9 C 1.50708 * 119.99791 * 184.97969 * 7 6 5 10 10 C 1.50700 * 109.47191 * 180.02562 * 9 7 6 11 11 C 1.38237 * 119.99840 * 269.73046 * 10 9 7 12 12 C 1.38234 * 120.00096 * 179.76649 * 11 10 9 13 13 C 1.38236 * 119.99829 * 0.50147 * 12 11 10 14 14 C 1.50697 * 119.99970 * 179.72593 * 13 12 11 15 15 O 1.42901 * 109.47014 * 120.02561 * 14 13 12 16 16 Si 1.86297 * 109.47371 * 0.02562 * 14 13 12 17 17 C 1.38244 * 119.99800 * 359.74921 * 13 12 11 18 18 C 1.38227 * 120.00134 * 0.02562 * 17 13 12 19 19 C 1.53781 * 113.61214 * 252.95775 * 5 3 2 20 20 C 1.53956 * 87.10927 * 220.08967 * 19 5 3 21 21 H 1.09001 * 113.67188 * 139.88723 * 20 19 5 22 22 O 1.42903 * 113.61192 * 270.84251 * 20 19 5 23 23 C 1.42901 * 113.99606 * 247.42252 * 22 20 19 24 24 C 1.53775 * 113.61695 * 155.45839 * 5 3 2 25 25 H 1.09003 * 109.46988 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47402 * 299.99789 * 1 2 3 27 27 H 1.08995 * 109.47338 * 60.00615 * 1 2 3 28 28 H 0.96997 * 120.00506 * 245.91625 * 6 5 3 29 29 H 1.09000 * 109.47278 * 299.99948 * 9 7 6 30 30 H 1.08997 * 109.47188 * 60.00142 * 9 7 6 31 31 H 1.08003 * 120.00157 * 359.97438 * 11 10 9 32 32 H 1.07998 * 120.00331 * 180.22598 * 12 11 10 33 33 H 1.09007 * 109.47131 * 240.01975 * 14 13 12 34 34 H 0.96700 * 113.99913 * 300.00011 * 15 14 13 35 35 H 1.48498 * 110.00390 * 179.97438 * 16 14 13 36 36 H 1.48503 * 110.00078 * 301.32123 * 16 14 13 37 37 H 1.07996 * 119.99669 * 179.97438 * 17 13 12 38 38 H 1.08002 * 120.00039 * 179.97438 * 18 17 13 39 39 H 1.09004 * 113.61302 * 334.55756 * 19 5 3 40 40 H 1.08990 * 113.61719 * 105.38464 * 19 5 3 41 41 H 1.08996 * 109.47632 * 60.00098 * 23 22 20 42 42 H 1.09001 * 109.46907 * 179.97438 * 23 22 20 43 43 H 1.09000 * 109.47433 * 299.99216 * 23 22 20 44 44 H 1.09001 * 113.61260 * 254.52854 * 24 5 3 45 45 H 1.09000 * 113.61478 * 25.34397 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1986 0.0758 -0.5557 7 6 4.0366 -0.2298 -1.8583 8 8 3.4438 0.5333 -2.5911 9 6 4.5920 -1.5200 -2.4043 10 6 4.2781 -1.6196 -3.8749 11 6 3.1064 -2.2228 -4.2922 12 6 2.8161 -2.3098 -5.6410 13 6 3.7025 -1.8030 -6.5728 14 6 3.3890 -1.9034 -8.0434 15 8 3.3275 -0.5921 -8.6079 16 14 1.7480 -2.7553 -8.2718 17 6 4.8767 -1.2044 -6.1557 18 6 5.1647 -1.1132 -4.8068 19 6 4.1603 1.7194 1.3465 20 6 5.1640 2.5611 0.5375 21 1 5.3635 3.5409 0.9716 22 8 6.3559 1.8533 0.1905 23 6 7.5315 2.3413 0.8400 24 6 4.1141 2.5873 -0.5858 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 4.7339 -0.4983 0.0142 29 1 5.6725 -1.5397 -2.2617 30 1 4.1407 -2.3613 -1.8784 31 1 2.4161 -2.6230 -3.5644 32 1 1.8990 -2.7778 -5.9669 33 1 4.1693 -2.4778 -8.5429 34 1 2.6534 -0.0240 -8.2106 35 1 1.4270 -2.8600 -9.7179 36 1 1.7886 -4.1082 -7.6608 37 1 5.5694 -0.8088 -6.8837 38 1 6.0823 -0.6460 -4.4809 39 1 3.4767 2.3176 1.9490 40 1 4.6213 0.9079 1.9094 41 1 7.4111 2.2582 1.9201 42 1 8.3922 1.7516 0.5244 43 1 7.6881 3.3859 0.5711 44 1 4.5391 2.4767 -1.5834 45 1 3.4173 3.4224 -0.5128 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:54 Heat of formation + Delta-G solvation = -127.250328 kcal Electronic energy + Delta-G solvation = -29992.529617 eV Core-core repulsion = 25750.546481 eV Total energy + Delta-G solvation = -4241.983136 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.38982 -40.88338 -40.35060 -39.54488 -37.66645 -37.51260 -36.87556 -34.27632 -33.71362 -31.86079 -29.94920 -29.08942 -27.89658 -27.12218 -26.52614 -25.47290 -23.73236 -22.79967 -22.31237 -21.32378 -20.41963 -19.08833 -18.42408 -18.19660 -18.01305 -17.39326 -17.20635 -17.10294 -16.83536 -16.46085 -16.23973 -16.16620 -15.86090 -15.58598 -15.39242 -14.88241 -14.76516 -14.61799 -14.42031 -14.26917 -13.96253 -13.83848 -13.43149 -13.39387 -13.17894 -13.03342 -12.99621 -12.75419 -12.60134 -12.18867 -12.15310 -12.09383 -11.87406 -11.71339 -11.60878 -11.49096 -10.83431 -10.71914 -10.35782 -10.12392 -9.78389 -9.52818 -4.96716 0.31638 0.54848 1.13347 1.36406 1.55183 1.67790 1.85804 1.96001 2.01669 2.48171 2.84265 3.17803 3.18880 3.47469 3.52769 3.63991 3.70688 3.82704 3.92137 3.94834 4.09698 4.13672 4.20342 4.26759 4.29775 4.30871 4.32236 4.38705 4.44447 4.47034 4.54596 4.58474 4.59283 4.63578 4.70046 4.71629 4.76605 4.96382 5.06174 5.15172 5.32453 5.42015 5.45710 5.62577 5.66630 6.05473 6.07898 6.43751 6.65224 6.76506 7.24379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.352 6.352 3 C 0.472 3.528 4 O -0.499 6.499 5 C 0.164 3.836 6 N -0.697 5.697 7 C 0.524 3.476 8 O -0.521 6.521 9 C -0.100 4.100 10 C -0.062 4.062 11 C -0.099 4.099 12 C -0.116 4.116 13 C -0.119 4.119 14 C -0.068 4.068 15 O -0.541 6.541 16 Si 0.687 3.313 17 C -0.091 4.091 18 C -0.102 4.102 19 C -0.143 4.143 20 C 0.068 3.932 21 H 0.090 0.910 22 O -0.363 6.363 23 C 0.028 3.972 24 C -0.122 4.122 25 H 0.102 0.898 26 H 0.063 0.937 27 H 0.064 0.936 28 H 0.410 0.590 29 H 0.106 0.894 30 H 0.107 0.893 31 H 0.124 0.876 32 H 0.125 0.875 33 H 0.113 0.887 34 H 0.380 0.620 35 H -0.255 1.255 36 H -0.258 1.258 37 H 0.125 0.875 38 H 0.122 0.878 39 H 0.113 0.887 40 H 0.095 0.905 41 H 0.044 0.956 42 H 0.089 0.911 43 H 0.045 0.955 44 H 0.098 0.902 45 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.961 -1.585 6.348 6.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.268 6.268 3 C 0.313 3.687 4 O -0.385 6.385 5 C 0.075 3.925 6 N -0.351 5.351 7 C 0.311 3.689 8 O -0.395 6.395 9 C -0.140 4.140 10 C -0.063 4.063 11 C -0.117 4.117 12 C -0.134 4.134 13 C -0.119 4.119 14 C -0.179 4.179 15 O -0.346 6.346 16 Si 0.590 3.410 17 C -0.109 4.109 18 C -0.120 4.120 19 C -0.181 4.181 20 C 0.009 3.991 21 H 0.108 0.892 22 O -0.281 6.281 23 C -0.068 4.068 24 C -0.161 4.161 25 H 0.120 0.880 26 H 0.082 0.918 27 H 0.083 0.917 28 H 0.246 0.754 29 H 0.124 0.876 30 H 0.125 0.875 31 H 0.142 0.858 32 H 0.143 0.857 33 H 0.130 0.870 34 H 0.227 0.773 35 H -0.180 1.180 36 H -0.183 1.183 37 H 0.143 0.857 38 H 0.140 0.860 39 H 0.131 0.869 40 H 0.114 0.886 41 H 0.063 0.937 42 H 0.107 0.893 43 H 0.064 0.936 44 H 0.116 0.884 45 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.330 -1.841 4.961 5.456 hybrid contribution 0.662 -0.117 0.666 0.946 sum 1.992 -1.957 5.627 6.282 Atomic orbital electron populations 1.23310 0.76129 1.03866 1.02684 1.86512 1.23533 1.33208 1.83534 1.23753 0.91312 0.81700 0.71911 1.90678 1.66208 1.36454 1.45183 1.21019 0.84487 0.88695 0.98330 1.45423 1.53430 1.25646 1.10626 1.20551 0.79368 0.87798 0.81199 1.90762 1.40972 1.50470 1.57300 1.20655 1.03487 0.96214 0.93652 1.19256 0.95078 0.98525 0.93418 1.20908 0.96185 0.99034 0.95569 1.20929 0.98689 1.00513 0.93240 1.20319 0.95759 1.00299 0.95566 1.25044 1.11101 0.90501 0.91249 1.86486 1.61921 1.23581 1.62646 0.94607 0.82557 0.82094 0.81763 1.20945 0.96364 0.98015 0.95594 1.21019 0.99395 0.98794 0.92834 1.23842 0.98761 1.01535 0.94000 1.23020 0.85268 0.95106 0.95686 0.89175 1.87913 1.14904 1.57369 1.67932 1.22880 0.87442 0.99606 0.96873 1.23579 0.96698 0.95096 1.00690 0.87976 0.91826 0.91710 0.75422 0.87559 0.87520 0.85817 0.85741 0.87008 0.77284 1.18034 1.18308 0.85669 0.85963 0.86873 0.88623 0.93713 0.89252 0.93620 0.88376 0.86472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.89 10.22 -39.26 -0.40 -1.29 16 3 C 0.47 1.60 6.58 36.01 0.24 1.83 16 4 O -0.50 -2.88 15.80 -18.75 -0.30 -3.18 16 5 C 0.16 0.12 1.01 -132.16 -0.13 -0.01 16 6 N -0.70 0.36 4.44 -47.92 -0.21 0.14 16 7 C 0.52 0.74 7.32 -10.98 -0.08 0.66 16 8 O -0.52 -2.87 14.58 5.56 0.08 -2.79 16 9 C -0.10 0.12 5.83 -29.03 -0.17 -0.05 16 10 C -0.06 -0.08 4.37 -104.62 -0.46 -0.53 16 11 C -0.10 -0.12 9.70 -39.58 -0.38 -0.51 16 12 C -0.12 -0.14 8.67 -39.58 -0.34 -0.48 16 13 C -0.12 -0.21 5.39 -104.62 -0.56 -0.77 16 14 C -0.07 -0.08 2.82 36.00 0.10 0.02 16 15 O -0.54 -0.98 12.77 -35.23 -0.45 -1.43 16 16 Si 0.69 0.10 29.79 -169.99 -5.06 -4.96 16 17 C -0.09 -0.19 9.61 -39.58 -0.38 -0.58 16 18 C -0.10 -0.17 9.70 -39.59 -0.38 -0.56 16 19 C -0.14 0.28 7.20 -25.83 -0.19 0.09 16 20 C 0.07 -0.09 4.38 -25.83 -0.11 -0.20 16 21 H 0.09 -0.24 7.87 -51.93 -0.41 -0.65 16 22 O -0.36 0.26 10.15 -35.23 -0.36 -0.10 16 23 C 0.03 -0.08 10.85 101.05 1.10 1.02 16 24 C -0.12 -0.14 6.67 -25.92 -0.17 -0.31 16 25 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 26 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 27 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 28 H 0.41 -1.30 8.67 -40.82 -0.35 -1.65 16 29 H 0.11 -0.33 8.08 -51.93 -0.42 -0.75 16 30 H 0.11 -0.34 8.08 -51.93 -0.42 -0.76 16 31 H 0.12 -0.05 8.06 -52.48 -0.42 -0.48 16 32 H 0.13 -0.07 4.88 -52.49 -0.26 -0.33 16 33 H 0.11 0.15 7.96 -51.92 -0.41 -0.26 16 34 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 35 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 36 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 37 H 0.13 0.20 8.06 -52.49 -0.42 -0.22 16 38 H 0.12 0.04 8.06 -52.49 -0.42 -0.39 16 39 H 0.11 -0.27 8.09 -51.93 -0.42 -0.69 16 40 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 41 H 0.04 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 44 H 0.10 0.30 7.20 -51.93 -0.37 -0.07 16 45 H 0.12 0.17 7.38 -51.93 -0.38 -0.22 16 LS Contribution 380.67 15.07 5.74 5.74 Total: 0.00 -10.13 380.67 -8.31 -18.43 By element: Atomic # 1 Polarization: -4.80 SS G_CDS: -6.48 Total: -11.27 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -0.87 Total: 0.71 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.21 Total: 0.14 kcal Atomic # 8 Polarization: -7.36 SS G_CDS: -1.42 Total: -8.79 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.06 Total: -4.96 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -10.13 -8.31 -18.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.816 kcal (2) G-P(sol) polarization free energy of solvation -10.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.434 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds