Wall clock time and date at job start Sun Mar 7 2021 00:13:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99759 * 2 1 4 4 O 1.20825 * 120.00366 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99746 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.84941 * 35.49220 * 5 3 2 7 7 C 1.34781 * 119.99911 * 66.99162 * 6 5 3 8 8 O 1.21591 * 120.00158 * 354.92506 * 7 6 5 9 9 C 1.47577 * 119.99946 * 174.92299 * 7 6 5 10 10 C 1.40203 * 119.83242 * 0.20879 * 9 7 6 11 11 C 1.36237 * 120.37817 * 180.25991 * 10 9 7 12 12 C 1.39876 * 119.95804 * 359.77554 * 11 10 9 13 13 C 1.46253 * 133.84256 * 179.97438 * 12 11 10 14 14 C 1.50701 * 126.48129 * 0.05841 * 13 12 11 15 15 O 1.42894 * 109.47360 * 74.99987 * 14 13 12 16 16 Si 1.86307 * 109.46935 * 194.99833 * 14 13 12 17 17 C 1.34455 * 107.03727 * 180.02562 * 13 12 11 18 18 N 1.36563 * 109.98413 * 0.02562 * 17 13 12 19 19 C 1.37831 * 109.85903 * 359.97438 * 18 17 13 20 20 C 1.38642 * 133.37583 * 179.97438 * 19 18 17 21 21 C 1.53777 * 113.69195 * 264.22125 * 5 3 2 22 22 C 1.53779 * 87.08339 * 220.00850 * 21 5 3 23 23 H 1.08997 * 113.68822 * 139.99009 * 22 21 5 24 24 O 1.42892 * 113.61545 * 270.88286 * 22 21 5 25 25 C 1.42899 * 114.00234 * 247.49232 * 24 22 21 26 26 C 1.53780 * 113.61039 * 166.68983 * 5 3 2 27 27 H 1.09000 * 109.47176 * 60.00086 * 1 2 3 28 28 H 1.08997 * 109.46747 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47406 * 299.99935 * 1 2 3 30 30 H 0.96997 * 120.00010 * 246.98401 * 6 5 3 31 31 H 1.07998 * 119.81232 * 0.03381 * 10 9 7 32 32 H 1.08000 * 120.02033 * 179.79290 * 11 10 9 33 33 H 1.08995 * 109.47332 * 314.99727 * 14 13 12 34 34 H 0.96699 * 114.00559 * 179.97438 * 15 14 13 35 35 H 1.48503 * 109.99704 * 178.67634 * 16 14 13 36 36 H 1.48496 * 110.00007 * 299.99822 * 16 14 13 37 37 H 1.08002 * 125.00631 * 179.97438 * 17 13 12 38 38 H 0.97001 * 125.06740 * 180.02562 * 18 17 13 39 39 H 1.07997 * 120.16716 * 0.02562 * 20 19 18 40 40 H 1.09003 * 113.61285 * 334.56157 * 21 5 3 41 41 H 1.09001 * 113.61027 * 105.45928 * 21 5 3 42 42 H 1.09005 * 109.46673 * 60.00597 * 25 24 22 43 43 H 1.08997 * 109.47168 * 179.97438 * 25 24 22 44 44 H 1.09000 * 109.47478 * 300.00630 * 25 24 22 45 45 H 1.09009 * 113.61394 * 254.61272 * 26 5 3 46 46 H 1.08999 * 113.62043 * 25.51313 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1922 0.2069 -0.7828 7 6 4.0356 0.1722 -2.1210 8 8 3.3007 0.9717 -2.6680 9 6 4.7560 -0.8360 -2.9224 10 6 5.5992 -1.7590 -2.2876 11 6 6.2737 -2.6911 -3.0171 12 6 6.1229 -2.7333 -4.4071 13 6 6.6824 -3.5783 -5.4616 14 6 7.6505 -4.7183 -5.2771 15 8 6.9591 -5.8487 -4.7423 16 14 8.3990 -5.1697 -6.9224 17 6 6.1690 -3.1460 -6.6267 18 7 5.3276 -2.0937 -6.4041 19 6 5.2749 -1.8134 -5.0556 20 6 4.5925 -0.8679 -4.3056 21 6 4.1754 1.4491 1.4018 22 6 5.1714 2.4300 0.7610 23 1 5.3797 3.3062 1.3750 24 8 6.3572 1.8022 0.2696 25 6 7.5413 2.1526 0.9888 26 6 4.1097 2.6764 -0.3239 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 4.7195 -0.4753 -0.3384 31 1 5.7174 -1.7286 -1.2145 32 1 6.9242 -3.3972 -2.5225 33 1 8.4403 -4.4166 -4.5892 34 1 7.5217 -6.6217 -4.5976 35 1 9.3794 -6.2716 -6.7491 36 1 7.3325 -5.5830 -7.8694 37 1 6.3902 -3.5683 -7.5958 38 1 4.8393 -1.6153 -7.0923 39 1 3.9401 -0.1575 -4.7914 40 1 3.4992 1.9181 2.1166 41 1 4.6424 0.5442 1.7904 42 1 7.4318 1.8603 2.0332 43 1 8.3966 1.6349 0.5547 44 1 7.6984 3.2295 0.9275 45 1 4.5239 2.7624 -1.3286 46 1 3.4157 3.4810 -0.0810 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:13:57 Heat of formation + Delta-G solvation = -84.184498 kcal Electronic energy + Delta-G solvation = -32998.250285 eV Core-core repulsion = 28436.256432 eV Total energy + Delta-G solvation = -4561.993853 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.145 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.49005 -42.20600 -40.51005 -39.79695 -37.88375 -37.58884 -37.39177 -36.83372 -34.09468 -33.28915 -30.71901 -30.56144 -29.15553 -27.83497 -27.07411 -26.61264 -26.28932 -24.52812 -23.53825 -22.58140 -21.52161 -20.55038 -20.36517 -19.24675 -18.99802 -18.43713 -18.27284 -17.98129 -17.39686 -17.22217 -17.04896 -16.78160 -16.13171 -16.10335 -15.84998 -15.69672 -15.36513 -15.22220 -14.98055 -14.73668 -14.68627 -14.64720 -14.37790 -14.13771 -13.82944 -13.76963 -13.35833 -13.29952 -13.12280 -12.91273 -12.60004 -12.56108 -12.50067 -12.13657 -12.10090 -12.02068 -11.80683 -11.63299 -11.42823 -10.84383 -10.67839 -10.65669 -10.36406 -10.09093 -9.26175 -8.73057 -4.97463 -0.17747 0.48827 1.19904 1.29008 1.41593 1.56690 1.75482 1.87910 1.93835 2.11468 2.18562 2.54504 2.99546 3.22412 3.25187 3.50208 3.51349 3.65345 3.77899 3.78684 3.86868 4.02881 4.14121 4.17006 4.27530 4.29906 4.32185 4.36635 4.37960 4.41933 4.45627 4.51736 4.56600 4.64785 4.66124 4.70505 4.75712 4.76071 4.80041 4.99251 5.06539 5.32690 5.36239 5.50221 5.52066 5.57522 5.68701 6.06933 6.11964 6.44220 6.49941 6.53428 6.85082 7.27045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.352 6.352 3 C 0.473 3.527 4 O -0.497 6.497 5 C 0.165 3.835 6 N -0.689 5.689 7 C 0.572 3.428 8 O -0.532 6.532 9 C -0.117 4.117 10 C -0.108 4.108 11 C -0.073 4.073 12 C -0.061 4.061 13 C -0.165 4.165 14 C -0.037 4.037 15 O -0.537 6.537 16 Si 0.680 3.320 17 C 0.079 3.921 18 N -0.584 5.584 19 C 0.082 3.918 20 C -0.055 4.055 21 C -0.145 4.145 22 C 0.067 3.933 23 H 0.091 0.909 24 O -0.361 6.361 25 C 0.028 3.972 26 C -0.123 4.123 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.410 0.590 31 H 0.127 0.873 32 H 0.129 0.871 33 H 0.073 0.927 34 H 0.376 0.624 35 H -0.260 1.260 36 H -0.255 1.255 37 H 0.176 0.824 38 H 0.422 0.578 39 H 0.136 0.864 40 H 0.113 0.887 41 H 0.096 0.904 42 H 0.044 0.956 43 H 0.089 0.911 44 H 0.045 0.955 45 H 0.096 0.904 46 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.911 -1.430 1.382 6.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.268 6.268 3 C 0.313 3.687 4 O -0.383 6.383 5 C 0.075 3.925 6 N -0.343 5.343 7 C 0.360 3.640 8 O -0.409 6.409 9 C -0.121 4.121 10 C -0.128 4.128 11 C -0.091 4.091 12 C -0.066 4.066 13 C -0.172 4.172 14 C -0.148 4.148 15 O -0.344 6.344 16 Si 0.581 3.419 17 C -0.049 4.049 18 N -0.186 5.186 19 C -0.025 4.025 20 C -0.076 4.076 21 C -0.183 4.183 22 C 0.009 3.991 23 H 0.109 0.891 24 O -0.279 6.279 25 C -0.068 4.068 26 C -0.161 4.161 27 H 0.082 0.918 28 H 0.120 0.880 29 H 0.082 0.918 30 H 0.248 0.752 31 H 0.144 0.856 32 H 0.146 0.854 33 H 0.091 0.909 34 H 0.224 0.776 35 H -0.185 1.185 36 H -0.179 1.179 37 H 0.193 0.807 38 H 0.260 0.740 39 H 0.153 0.847 40 H 0.131 0.869 41 H 0.115 0.885 42 H 0.063 0.937 43 H 0.108 0.892 44 H 0.063 0.937 45 H 0.114 0.886 46 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 4.703 -0.836 0.089 4.778 hybrid contribution -0.388 -0.987 0.845 1.356 sum 4.315 -1.823 0.934 4.776 Atomic orbital electron populations 1.23306 0.76186 1.03852 1.02631 1.86524 1.23507 1.33162 1.83557 1.23722 0.91301 0.81690 0.71960 1.90667 1.66260 1.36436 1.44965 1.21044 0.84661 0.91294 0.95460 1.45283 1.53734 1.28937 1.06383 1.18154 0.80647 0.83683 0.81478 1.90818 1.37678 1.41101 1.71311 1.19284 1.01500 0.98475 0.92857 1.20672 0.97241 0.95258 0.99610 1.20149 0.99352 0.98200 0.91424 1.19161 0.98143 0.95975 0.93358 1.19490 1.06018 1.00142 0.91550 1.24007 0.96233 0.86062 1.08465 1.86643 1.39304 1.23464 1.84945 0.95238 0.80990 0.88056 0.77612 1.21736 0.93345 0.90383 0.99468 1.41686 1.40597 1.29956 1.06349 1.18035 1.01382 0.99263 0.83778 1.20048 0.98552 0.96925 0.92083 1.23816 0.98688 1.02348 0.93422 1.22991 0.85479 0.94987 0.95660 0.89140 1.87938 1.14716 1.68918 1.56374 1.22882 0.87296 1.00265 0.96352 1.23584 0.96551 0.94245 1.01684 0.91778 0.87995 0.91799 0.75209 0.85568 0.85350 0.90925 0.77620 1.18487 1.17937 0.80690 0.73982 0.84651 0.86875 0.88509 0.93738 0.89210 0.93664 0.88585 0.86237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.35 -1.43 10.41 -39.27 -0.41 -1.84 16 3 C 0.47 2.21 6.42 36.01 0.23 2.44 16 4 O -0.50 -3.46 15.66 -18.75 -0.29 -3.76 16 5 C 0.16 0.33 1.00 -132.16 -0.13 0.20 16 6 N -0.69 -1.11 4.47 -48.94 -0.22 -1.33 16 7 C 0.57 2.36 7.24 -12.45 -0.09 2.27 16 8 O -0.53 -3.99 15.03 5.29 0.08 -3.91 16 9 C -0.12 -0.34 5.87 -104.95 -0.62 -0.95 16 10 C -0.11 -0.11 9.46 -39.56 -0.37 -0.48 16 11 C -0.07 -0.11 10.03 -39.69 -0.40 -0.51 16 12 C -0.06 -0.16 6.35 -105.05 -0.67 -0.83 16 13 C -0.16 -0.23 5.60 -102.74 -0.58 -0.80 16 14 C -0.04 0.01 3.05 36.01 0.11 0.12 16 15 O -0.54 -0.68 12.86 -35.23 -0.45 -1.13 16 16 Si 0.68 -1.14 30.79 -169.99 -5.23 -6.37 16 17 C 0.08 -0.02 10.43 -16.78 -0.18 -0.20 16 18 N -0.58 0.11 6.07 -10.68 -0.06 0.05 16 19 C 0.08 0.19 7.26 -84.00 -0.61 -0.42 16 20 C -0.05 -0.16 9.61 -39.03 -0.37 -0.54 16 21 C -0.14 0.18 7.20 -25.92 -0.19 -0.01 16 22 C 0.07 -0.05 4.37 -25.92 -0.11 -0.16 16 23 H 0.09 -0.22 7.87 -51.93 -0.41 -0.63 16 24 O -0.36 0.00 10.13 -35.23 -0.36 -0.36 16 25 C 0.03 -0.06 10.85 101.05 1.10 1.03 16 26 C -0.12 -0.23 6.67 -25.92 -0.17 -0.40 16 27 H 0.06 0.17 8.13 -51.93 -0.42 -0.26 16 28 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.06 0.07 8.13 -51.93 -0.42 -0.36 16 30 H 0.41 -0.33 6.68 -40.82 -0.27 -0.60 16 31 H 0.13 -0.21 6.37 -52.49 -0.33 -0.54 16 32 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 33 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 34 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 35 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 36 H -0.25 -0.22 7.04 56.52 0.40 0.18 16 37 H 0.18 -0.53 6.30 -52.49 -0.33 -0.86 16 38 H 0.42 -1.28 8.96 -40.82 -0.37 -1.65 16 39 H 0.14 0.38 7.62 -52.49 -0.40 -0.02 16 40 H 0.11 -0.24 8.10 -51.93 -0.42 -0.66 16 41 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 42 H 0.04 -0.14 8.14 -51.93 -0.42 -0.57 16 43 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 44 H 0.04 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.10 0.36 7.41 -51.92 -0.38 -0.03 16 46 H 0.12 0.22 7.35 -51.93 -0.38 -0.16 16 LS Contribution 389.88 15.07 5.88 5.88 Total: 0.00 -11.85 389.88 -8.95 -20.80 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -5.89 Total: -9.91 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: -1.98 Total: 1.88 kcal Atomic # 7 Polarization: -1.00 SS G_CDS: -0.28 Total: -1.29 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: -1.43 Total: -10.99 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.23 Total: -6.37 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -11.85 -8.95 -20.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.380 kcal (2) G-P(sol) polarization free energy of solvation -11.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds