Wall clock time and date at job start Sun Mar 7 2021 00:14:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34224 * 116.99824 * 2 1 4 4 O 1.20826 * 120.00394 * 359.97438 * 3 2 1 5 5 C 1.50705 * 119.99825 * 180.02562 * 3 2 1 6 6 N 1.46495 * 112.84677 * 324.06510 * 5 3 2 7 7 C 1.34780 * 120.00122 * 293.64171 * 6 5 3 8 8 O 1.21550 * 120.00080 * 354.97466 * 7 6 5 9 9 C 1.47848 * 119.99799 * 174.96824 * 7 6 5 10 10 C 1.39545 * 120.14239 * 0.02562 * 9 7 6 11 11 C 1.38068 * 119.84090 * 180.02562 * 10 9 7 12 12 Br 1.89105 * 119.93409 * 179.97438 * 11 10 9 13 13 C 1.38420 * 120.12693 * 359.97438 * 11 10 9 14 14 C 1.38362 * 120.28292 * 0.02562 * 13 11 10 15 15 C 1.50698 * 119.92358 * 179.97438 * 14 13 11 16 16 O 1.42907 * 109.47309 * 119.99814 * 15 14 13 17 17 Si 1.86302 * 109.47194 * 0.02562 * 15 14 13 18 18 C 1.37948 * 120.15513 * 359.97438 * 14 13 11 19 19 C 1.53787 * 113.61327 * 192.87029 * 5 3 2 20 20 C 1.53781 * 87.07924 * 270.80030 * 19 5 3 21 21 H 1.08993 * 113.61677 * 89.20391 * 20 19 5 22 22 O 1.42901 * 113.61038 * 220.02219 * 20 19 5 23 23 C 1.42904 * 114.00043 * 210.00133 * 22 20 19 24 24 C 1.53777 * 113.68999 * 95.33518 * 5 3 2 25 25 H 1.09003 * 109.46639 * 299.99916 * 1 2 3 26 26 H 1.08993 * 109.47061 * 60.00126 * 1 2 3 27 27 H 1.09001 * 109.46717 * 180.02562 * 1 2 3 28 28 H 0.97005 * 119.99873 * 113.64582 * 6 5 3 29 29 H 1.08001 * 120.07502 * 0.04264 * 10 9 7 30 30 H 1.08002 * 119.85729 * 179.72746 * 13 11 10 31 31 H 1.08997 * 109.47256 * 239.99794 * 15 14 13 32 32 H 0.96695 * 114.00281 * 180.02562 * 16 15 14 33 33 H 1.48499 * 109.99721 * 298.68158 * 17 15 14 34 34 H 1.48497 * 109.99886 * 59.99506 * 17 15 14 35 35 H 1.08002 * 120.05762 * 180.02562 * 18 14 13 36 36 H 1.09005 * 113.61218 * 25.34417 * 19 5 3 37 37 H 1.08998 * 113.61231 * 156.16473 * 19 5 3 38 38 H 1.08998 * 109.47314 * 179.97438 * 23 22 20 39 39 H 1.09001 * 109.46544 * 299.99856 * 23 22 20 40 40 H 1.09002 * 109.47200 * 59.99716 * 23 22 20 41 41 H 1.09001 * 113.60949 * 203.67124 * 24 5 3 42 42 H 1.08995 * 113.61883 * 334.58129 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 7 4.1919 0.2129 0.7912 7 6 4.0242 0.1812 2.1282 8 8 3.4314 1.0828 2.6878 9 6 4.5611 -0.9502 2.9140 10 6 5.2425 -1.9866 2.2746 11 6 5.7409 -3.0404 3.0144 12 35 6.6641 -4.4466 2.1505 13 6 5.5661 -3.0695 4.3872 14 6 4.8914 -2.0446 5.0265 15 6 4.7052 -2.0849 6.5214 16 8 5.3210 -0.9370 7.1092 17 14 5.4927 -3.6292 7.2040 18 6 4.3886 -0.9861 4.2988 19 6 4.1098 2.6788 0.3134 20 6 4.0435 2.9565 -1.1977 21 1 3.0861 3.3609 -1.5258 22 8 5.1589 3.7004 -1.6924 23 6 4.8538 4.5255 -2.8186 24 6 4.1760 1.4382 -1.4029 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 4.7269 -0.4676 0.3533 29 1 5.3799 -1.9642 1.2036 30 1 5.9540 -3.8981 4.9612 31 1 3.6406 -2.0857 6.7551 32 1 5.2405 -0.8972 8.0720 33 1 4.8401 -4.8306 6.6246 34 1 6.9444 -3.6395 6.8920 35 1 3.8625 -0.1868 4.7995 36 1 3.4249 3.2910 0.9002 37 1 5.1235 2.6751 0.7140 38 1 5.7518 5.0571 -3.1334 39 1 4.4934 3.9033 -3.6377 40 1 4.0834 5.2458 -2.5432 41 1 5.2084 1.0955 -1.4727 42 1 3.5447 1.0489 -2.2016 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:16 Heat of formation + Delta-G solvation = -115.567619 kcal Electronic energy + Delta-G solvation = -29849.992437 eV Core-core repulsion = 25424.235518 eV Total energy + Delta-G solvation = -4425.756919 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.045 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.59228 -41.32516 -40.25585 -39.55918 -37.76702 -37.68698 -37.09526 -34.69108 -33.72778 -32.93834 -30.55541 -29.34427 -27.97762 -27.16416 -27.08116 -26.46593 -24.95224 -23.12208 -22.73316 -21.48377 -20.75024 -19.45745 -18.81826 -18.55469 -18.04532 -17.83797 -17.54864 -17.26977 -17.18787 -16.74485 -16.26629 -16.13770 -15.96721 -15.50186 -15.29913 -15.09828 -14.91288 -14.82987 -14.38361 -14.28848 -14.20615 -13.76486 -13.62935 -13.54449 -13.34330 -13.05825 -12.72801 -12.62719 -12.48266 -12.29125 -12.14101 -12.04522 -11.93582 -11.83333 -11.71277 -11.54985 -11.10785 -10.62999 -10.59832 -10.44307 -10.23345 -9.96159 -5.10801 -0.58592 -0.22227 0.33093 0.94020 1.11021 1.37210 1.51267 1.59803 1.72583 1.82811 2.41254 2.74608 2.99106 3.05237 3.16736 3.24738 3.46929 3.51743 3.56240 3.66459 3.80552 3.90550 3.96820 4.05903 4.11753 4.21320 4.21889 4.31284 4.33359 4.39033 4.41946 4.49362 4.54876 4.61363 4.65695 4.73623 4.76140 4.86418 4.94222 5.00898 5.07216 5.28887 5.32166 6.11672 6.14969 6.49067 6.61444 6.92960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.479 3.521 4 O -0.488 6.488 5 C 0.156 3.844 6 N -0.705 5.705 7 C 0.567 3.433 8 O -0.514 6.514 9 C -0.125 4.125 10 C -0.052 4.052 11 C -0.093 4.093 12 Br -0.031 7.031 13 C -0.069 4.069 14 C -0.074 4.074 15 C -0.073 4.073 16 O -0.543 6.543 17 Si 0.681 3.319 18 C -0.012 4.012 19 C -0.111 4.111 20 C 0.065 3.935 21 H 0.102 0.898 22 O -0.370 6.370 23 C 0.027 3.973 24 C -0.142 4.142 25 H 0.066 0.934 26 H 0.066 0.934 27 H 0.104 0.896 28 H 0.409 0.591 29 H 0.141 0.859 30 H 0.134 0.866 31 H 0.083 0.917 32 H 0.387 0.613 33 H -0.250 1.250 34 H -0.245 1.245 35 H 0.151 0.849 36 H 0.097 0.903 37 H 0.111 0.889 38 H 0.089 0.911 39 H 0.044 0.956 40 H 0.046 0.954 41 H 0.119 0.881 42 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.319 -3.324 0.224 3.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.319 3.681 4 O -0.373 6.373 5 C 0.067 3.933 6 N -0.360 5.360 7 C 0.354 3.646 8 O -0.389 6.389 9 C -0.129 4.129 10 C -0.072 4.072 11 C -0.172 4.172 12 Br 0.055 6.945 13 C -0.089 4.089 14 C -0.075 4.075 15 C -0.183 4.183 16 O -0.350 6.350 17 Si 0.582 3.418 18 C -0.031 4.031 19 C -0.149 4.149 20 C 0.007 3.993 21 H 0.120 0.880 22 O -0.288 6.288 23 C -0.069 4.069 24 C -0.180 4.180 25 H 0.084 0.916 26 H 0.084 0.916 27 H 0.123 0.877 28 H 0.246 0.754 29 H 0.159 0.841 30 H 0.152 0.848 31 H 0.100 0.900 32 H 0.235 0.765 33 H -0.175 1.175 34 H -0.170 1.170 35 H 0.168 0.832 36 H 0.116 0.884 37 H 0.129 0.871 38 H 0.108 0.892 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.137 0.863 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 0.099 -3.532 -0.444 3.561 hybrid contribution -0.703 0.147 -0.632 0.957 sum -0.604 -3.385 -1.076 3.603 Atomic orbital electron populations 1.23368 0.75572 1.04138 1.02893 1.86497 1.23912 1.32674 1.83569 1.23085 0.90523 0.81927 0.72530 1.90698 1.66008 1.36317 1.44285 1.21030 0.85916 0.90831 0.95483 1.45642 1.53430 1.30381 1.06527 1.18137 0.79258 0.85518 0.81651 1.90854 1.40926 1.36960 1.70136 1.19842 1.02892 0.95708 0.94450 1.21273 0.94379 0.91473 1.00101 1.21574 1.04330 0.96630 0.94686 1.96838 1.74668 1.44527 1.78499 1.21080 0.96339 0.98355 0.93104 1.19330 0.98853 0.94808 0.94475 1.24656 1.02074 1.00041 0.91542 1.86490 1.79119 1.43499 1.25854 0.95030 0.80625 0.75274 0.90884 1.21269 0.93714 0.96469 0.91662 1.23501 1.03442 0.91600 0.96392 1.23576 0.91065 0.90036 0.94670 0.88011 1.87949 1.33357 1.59628 1.47832 1.22878 1.02180 0.93900 0.87983 1.23872 1.03254 0.98169 0.92682 0.91563 0.91559 0.87716 0.75379 0.84109 0.84847 0.89964 0.76524 1.17481 1.16972 0.83170 0.88421 0.87083 0.89203 0.93771 0.93556 0.86300 0.89321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.86 10.42 -39.24 -0.41 -1.27 16 3 C 0.48 1.62 6.45 36.01 0.23 1.85 16 4 O -0.49 -2.74 15.12 -18.75 -0.28 -3.03 16 5 C 0.16 0.18 1.11 -132.16 -0.15 0.03 16 6 N -0.70 -0.08 5.07 -48.85 -0.25 -0.33 16 7 C 0.57 1.51 7.42 -12.33 -0.09 1.42 16 8 O -0.51 -3.13 15.39 5.32 0.08 -3.05 16 9 C -0.12 -0.20 5.87 -104.97 -0.62 -0.81 16 10 C -0.05 0.00 9.27 -39.16 -0.36 -0.36 16 11 C -0.09 -0.09 6.22 -39.58 -0.25 -0.34 16 12 Br -0.03 -0.02 33.69 -68.01 -2.29 -2.31 16 13 C -0.07 -0.10 8.41 -39.47 -0.33 -0.44 16 14 C -0.07 -0.11 5.42 -104.68 -0.57 -0.67 16 15 C -0.07 0.06 2.81 36.00 0.10 0.16 16 16 O -0.54 0.25 12.74 -35.23 -0.45 -0.20 16 17 Si 0.68 -1.25 29.78 -169.99 -5.06 -6.31 16 18 C -0.01 -0.03 9.15 -39.18 -0.36 -0.38 16 19 C -0.11 -0.22 6.15 -25.92 -0.16 -0.38 16 20 C 0.07 0.05 3.92 -25.92 -0.10 -0.05 16 21 H 0.10 0.09 7.35 -51.93 -0.38 -0.29 16 22 O -0.37 -0.60 10.71 -35.23 -0.38 -0.98 16 23 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 24 C -0.14 0.16 7.21 -25.92 -0.19 -0.03 16 25 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 26 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.41 -1.17 6.76 -40.82 -0.28 -1.44 16 29 H 0.14 -0.39 6.42 -52.49 -0.34 -0.72 16 30 H 0.13 0.15 4.86 -52.49 -0.26 -0.11 16 31 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H 0.39 -2.11 8.74 45.56 0.40 -1.72 16 33 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 34 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 35 H 0.15 0.38 7.65 -52.49 -0.40 -0.02 16 36 H 0.10 0.38 7.64 -51.93 -0.40 -0.02 16 37 H 0.11 0.20 8.14 -51.93 -0.42 -0.23 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 40 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.12 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.09 -0.19 8.10 -51.93 -0.42 -0.61 16 LS Contribution 378.55 15.07 5.70 5.70 Total: 0.00 -9.64 378.55 -9.07 -18.71 By element: Atomic # 1 Polarization: -4.03 SS G_CDS: -5.06 Total: -9.09 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -0.67 Total: 2.15 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.25 Total: -0.33 kcal Atomic # 8 Polarization: -7.08 SS G_CDS: -1.44 Total: -8.52 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.06 Total: -6.31 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.29 Total: -2.31 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.64 -9.07 -18.71 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.862 kcal (2) G-P(sol) polarization free energy of solvation -9.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.705 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds